Life Stages, Demographic Rates and Leaf Damage for the Round-Leaved Orchids, Platanthera Orbiculata (Pursh.) Lindley and P
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Native Orchids in Southeast Alaska
Native Orchids in Southeast Alaska Marlin Bowles & Bob Armstrong 2019 Preface Southeast Alaska's rainforests, peatlands and alpine habitats support a wide variety of plant life. The composition of this vegetation is strongly influenced by patterns of plant distribution and geographical factors. For example, the ranges of some Asian plant species extend into Southeast Alaska by way of the Aleutian Islands; other species extend northward into this region along the Pacific coast or southward from central Alaska. Included in Southeast Alaska's vegetation are at least 27 native orchid species and varieties whose collective ranges extend from Mexico north to beyond the Arctic Circle, and from North America to northern Europe and Asia. These orchids survive in a delicate ecological balance, requiring specific insect pollinators for seed production, and mycorrhizal fungi that provide nutrients essential for seedling growth and survival of adult plants. These complex relationships can lead to vulnerability to human impacts. Orchids also tend to transplant poorly and typically perish without their fungal partners. They are best left to survive as important components of biodiversity as well as resources for our enjoyment. Our goal is to provide a useful description of Southeast Alaska's native orchids for readers who share enthusiasm for the natural environment and desire to learn more about our native orchids. This book addresses each of the native orchids found in the area of Southeast Alaska extending from Yakutat and the Yukon border south to Ketchikan and the British Columbia border. For each species, we include a brief description of its distribution, habitat, size, mode of reproduction, and pollination biology. -
Guide to the Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- LILIACEAE
Guide to the Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- LILIACEAE LILIACEAE de Jussieu 1789 (Lily Family) (also see AGAVACEAE, ALLIACEAE, ALSTROEMERIACEAE, AMARYLLIDACEAE, ASPARAGACEAE, COLCHICACEAE, HEMEROCALLIDACEAE, HOSTACEAE, HYACINTHACEAE, HYPOXIDACEAE, MELANTHIACEAE, NARTHECIACEAE, RUSCACEAE, SMILACACEAE, THEMIDACEAE, TOFIELDIACEAE) As here interpreted narrowly, the Liliaceae constitutes about 11 genera and 550 species, of the Northern Hemisphere. There has been much recent investigation and re-interpretation of evidence regarding the upper-level taxonomy of the Liliales, with strong suggestions that the broad Liliaceae recognized by Cronquist (1981) is artificial and polyphyletic. Cronquist (1993) himself concurs, at least to a degree: "we still await a comprehensive reorganization of the lilies into several families more comparable to other recognized families of angiosperms." Dahlgren & Clifford (1982) and Dahlgren, Clifford, & Yeo (1985) synthesized an early phase in the modern revolution of monocot taxonomy. Since then, additional research, especially molecular (Duvall et al. 1993, Chase et al. 1993, Bogler & Simpson 1995, and many others), has strongly validated the general lines (and many details) of Dahlgren's arrangement. The most recent synthesis (Kubitzki 1998a) is followed as the basis for familial and generic taxonomy of the lilies and their relatives (see summary below). References: Angiosperm Phylogeny Group (1998, 2003); Tamura in Kubitzki (1998a). Our “liliaceous” genera (members of orders placed in the Lilianae) are therefore divided as shown below, largely following Kubitzki (1998a) and some more recent molecular analyses. ALISMATALES TOFIELDIACEAE: Pleea, Tofieldia. LILIALES ALSTROEMERIACEAE: Alstroemeria COLCHICACEAE: Colchicum, Uvularia. LILIACEAE: Clintonia, Erythronium, Lilium, Medeola, Prosartes, Streptopus, Tricyrtis, Tulipa. MELANTHIACEAE: Amianthium, Anticlea, Chamaelirium, Helonias, Melanthium, Schoenocaulon, Stenanthium, Veratrum, Toxicoscordion, Trillium, Xerophyllum, Zigadenus. -
Native Orchids in Southeast Alaska with an Emphasis on Juneau
Native Orchids in Southeast Alaska with an Emphasis on Juneau Marlin Bowles & Bob Armstrong 2019 Acknowledgements We are grateful to numerous people and agencies who provided essential assistance with this project. Carole Baker, Gilbette Blais, Kathy Hocker, John Hudson, Jenny McBride and Chris Miller helped locate and study many elusive species. Pam Bergeson, Ron Hanko, & Kris Larson for use of their photos. Ellen Carrlee provided access to the Juneau Botanical Club herbarium at the Alaska State Museum. The U.S. Forest Service Forestry Sciences Research Station at Juneau also provided access to its herbarium, and Glacier Bay National Park provided data on plant collections in its herbarium. Merrill Jensen assisted with plant resources at the Jensen-Olson Arboretum. Don Kurz, Jenny McBride, Lisa Wallace, and Mary Willson reviewed and vastly improved earlier versions of this book. About the Authors Marlin Bowles lives in Juneau, AK. He is a retired plant conservation biologist, formerly with the Morton Arboretum, Lisle, IL. He has studied the distribution, ecology and reproductionof grassland orchids. Bob Armstrong has authored and co-authored several books about nature in Alaska. This book and many others are available for free as PDFs at https://www.naturebob.com He has worked in Alaska as a biologist, research supervisor and associate professor since 1960. Table of Contents Page The southeast Alaska archipellago . 1 The orchid plant family . 2 Characteristics of orchids . 3 Floral anatomy . 4 Sources of orchid information . 5 Orchid species groups . 6 Orchid habitats . Fairy Slippers . 9 Eastern - Calypso bulbosa var. americana Western - Calypso bulbosa var. occidentalis Lady’s Slippers . -
Isolation and Characterization of New Polymorphic Microsatellite Loci in the Mixotrophic Orchid Limodorum Abortivum L
Molecular Ecology Resources (2008) 8, 1117–1120 doi: 10.1111/j.1755-0998.2008.02176.x PERMANENTBlackwell Publishing Ltd GENETIC RESOURCES Isolation and characterization of new polymorphic microsatellite loci in the mixotrophic orchid Limodorum abortivum L. Swartz (Orchidaceae) V. TRANCHIDA LOMBARDO,* S. E. HOPKINS,† M.-A. SELOSSE,‡ S. COZZOLINO§ and D. L. TAYLOR† *Sezione di Biologia ed Ecologia Vegetale D.A.C.P.A., Università di Catania, Via Valdisavoia 5, 95123 Catania, Italy, †Institute of Arctic Biology, University of Alaska Fairbanks, 311 Irving I Building, Fairbanks, AK 99775, USA, ‡Centre d’Ecologie Fonctionnelle et Evolutive, CNRS, UMR 5175, Equipe Interactions Biotiques, 1919 Route de Mende, 34293 Montpellier cédex, France, §Dipartimento delle Scienze Biologiche, Università di Napoli ‘Federico II’, Via Foria 223, 80139 Naples, Italy Abstract Here, we report the isolation and characterization of 11 polymorphic microsatellites in Limodorum abortivum. Allele variability has been characterized in three populations from Southern Italy and France. The number of alleles ranged from one to six per locus with an average of 3.8 alleles per locus. Observed and expected heterozygosity values ranged from 0.000 to 1.000 and from 0.492 to 0.806, respectively, with striking differences among populations. These microsatellites should be valuable tools for studying fine-scale genetic structure of scattered Limodorum abortivum populations, patterns of relationship with closely related taxa and the evolutionary ecology of its mycorrhizal interactions. Keywords: cross-species amplification, genomic library, Limodorum abortivum, microsatellite, orchids Received 7 December 2007; revision accepted 12 February 2008 Limodorum abortivum (tribe Neottiae, Orchidaceae) has a termed mixotrophy (Selosse et al. -
Phylogenetic Placement of the Enigmatic Orchid Genera Thaia and Tangtsinia: Evidence from Molecular and Morphological Characters
TAXON 61 (1) • February 2012: 45–54 Xiang & al. • Phylogenetic placement of Thaia and Tangtsinia Phylogenetic placement of the enigmatic orchid genera Thaia and Tangtsinia: Evidence from molecular and morphological characters Xiao-Guo Xiang,1 De-Zhu Li,2 Wei-Tao Jin,1 Hai-Lang Zhou,1 Jian-Wu Li3 & Xiao-Hua Jin1 1 Herbarium & State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, P.R. China 2 Key Laboratory of Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650204, P.R. China 3 Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun Township, Mengla County, Yunnan province 666303, P.R. China Author for correspondence: Xiao-Hua Jin, [email protected] Abstract The phylogenetic position of two enigmatic Asian orchid genera, Thaia and Tangtsinia, were inferred from molecular data and morphological evidence. An analysis of combined plastid data (rbcL + matK + psaB) using Bayesian and parsimony methods revealed that Thaia is a sister group to the higher epidendroids, and tribe Neottieae is polyphyletic unless Thaia is removed. Morphological evidence, such as plicate leaves and corms, the structure of the gynostemium and the micromorphol- ogy of pollinia, also indicates that Thaia should be excluded from Neottieae. Thaieae, a new tribe, is therefore tentatively established. Using Bayesian and parsimony methods, analyses of combined plastid and nuclear datasets (rbcL, matK, psaB, trnL-F, ITS, Xdh) confirmed that the monotypic genus Tangtsinia was nested within and is synonymous with the genus Cepha- lanthera, in which an apical stigma has evolved independently at least twice. -
State of New York City's Plants 2018
STATE OF NEW YORK CITY’S PLANTS 2018 Daniel Atha & Brian Boom © 2018 The New York Botanical Garden All rights reserved ISBN 978-0-89327-955-4 Center for Conservation Strategy The New York Botanical Garden 2900 Southern Boulevard Bronx, NY 10458 All photos NYBG staff Citation: Atha, D. and B. Boom. 2018. State of New York City’s Plants 2018. Center for Conservation Strategy. The New York Botanical Garden, Bronx, NY. 132 pp. STATE OF NEW YORK CITY’S PLANTS 2018 4 EXECUTIVE SUMMARY 6 INTRODUCTION 10 DOCUMENTING THE CITY’S PLANTS 10 The Flora of New York City 11 Rare Species 14 Focus on Specific Area 16 Botanical Spectacle: Summer Snow 18 CITIZEN SCIENCE 20 THREATS TO THE CITY’S PLANTS 24 NEW YORK STATE PROHIBITED AND REGULATED INVASIVE SPECIES FOUND IN NEW YORK CITY 26 LOOKING AHEAD 27 CONTRIBUTORS AND ACKNOWLEGMENTS 30 LITERATURE CITED 31 APPENDIX Checklist of the Spontaneous Vascular Plants of New York City 32 Ferns and Fern Allies 35 Gymnosperms 36 Nymphaeales and Magnoliids 37 Monocots 67 Dicots 3 EXECUTIVE SUMMARY This report, State of New York City’s Plants 2018, is the first rankings of rare, threatened, endangered, and extinct species of what is envisioned by the Center for Conservation Strategy known from New York City, and based on this compilation of The New York Botanical Garden as annual updates thirteen percent of the City’s flora is imperiled or extinct in New summarizing the status of the spontaneous plant species of the York City. five boroughs of New York City. This year’s report deals with the City’s vascular plants (ferns and fern allies, gymnosperms, We have begun the process of assessing conservation status and flowering plants), but in the future it is planned to phase in at the local level for all species. -
Phylogeny, Character Evolution and the Systematics of Psilochilus (Triphoreae)
THE PRIMITIVE EPIDENDROIDEAE (ORCHIDACEAE): PHYLOGENY, CHARACTER EVOLUTION AND THE SYSTEMATICS OF PSILOCHILUS (TRIPHOREAE) A Dissertation Presented in Partial Fulfillment of the Requirements for The Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Erik Paul Rothacker, M.Sc. ***** The Ohio State University 2007 Doctoral Dissertation Committee: Approved by Dr. John V. Freudenstein, Adviser Dr. John Wenzel ________________________________ Dr. Andrea Wolfe Adviser Evolution, Ecology and Organismal Biology Graduate Program COPYRIGHT ERIK PAUL ROTHACKER 2007 ABSTRACT Considering the significance of the basal Epidendroideae in understanding patterns of morphological evolution within the subfamily, it is surprising that no fully resolved hypothesis of historical relationships has been presented for these orchids. This is the first study to improve both taxon and character sampling. The phylogenetic study of the basal Epidendroideae consisted of two components, molecular and morphological. A molecular phylogeny using three loci representing each of the plant genomes including gap characters is presented for the basal Epidendroideae. Here we find Neottieae sister to Palmorchis at the base of the Epidendroideae, followed by Triphoreae. Tropidieae and Sobralieae form a clade, however the relationship between these, Nervilieae and the advanced Epidendroids has not been resolved. A morphological matrix of 40 taxa and 30 characters was constructed and a phylogenetic analysis was performed. The results support many of the traditional views of tribal composition, but do not fully resolve relationships among many of the tribes. A robust hypothesis of relationships is presented based on the results of a total evidence analysis using three molecular loci, gap characters and morphology. Palmorchis is placed at the base of the tree, sister to Neottieae, followed successively by Triphoreae sister to Epipogium, then Sobralieae. -
Floristic Quality Assessment Report
FLORISTIC QUALITY ASSESSMENT IN INDIANA: THE CONCEPT, USE, AND DEVELOPMENT OF COEFFICIENTS OF CONSERVATISM Tulip poplar (Liriodendron tulipifera) the State tree of Indiana June 2004 Final Report for ARN A305-4-53 EPA Wetland Program Development Grant CD975586-01 Prepared by: Paul E. Rothrock, Ph.D. Taylor University Upland, IN 46989-1001 Introduction Since the early nineteenth century the Indiana landscape has undergone a massive transformation (Jackson 1997). In the pre-settlement period, Indiana was an almost unbroken blanket of forests, prairies, and wetlands. Much of the land was cleared, plowed, or drained for lumber, the raising of crops, and a range of urban and industrial activities. Indiana’s native biota is now restricted to relatively small and often isolated tracts across the State. This fragmentation and reduction of the State’s biological diversity has challenged Hoosiers to look carefully at how to monitor further changes within our remnant natural communities and how to effectively conserve and even restore many of these valuable places within our State. To meet this monitoring, conservation, and restoration challenge, one needs to develop a variety of appropriate analytical tools. Ideally these techniques should be simple to learn and apply, give consistent results between different observers, and be repeatable. Floristic Assessment, which includes metrics such as the Floristic Quality Index (FQI) and Mean C values, has gained wide acceptance among environmental scientists and decision-makers, land stewards, and restoration ecologists in Indiana’s neighboring states and regions: Illinois (Taft et al. 1997), Michigan (Herman et al. 1996), Missouri (Ladd 1996), and Wisconsin (Bernthal 2003) as well as northern Ohio (Andreas 1993) and southern Ontario (Oldham et al. -
Orchid (Orchidaceae) Decline in the Catoctin Mountains, Frederick County, Maryland As Documented by a Long-Term Dataset
Biodivers Conserv DOI 10.1007/s10531-014-0698-2 ORIGINAL PAPER Orchid (Orchidaceae) decline in the Catoctin Mountains, Frederick County, Maryland as documented by a long-term dataset Wesley M. Knapp • Richard Wiegand Received: 16 December 2013 / Revised: 25 March 2014 / Accepted: 12 April 2014 Ó The Author(s) 2014. This article is published with open access at Springerlink.com Abstract A 41-year study (1968–2008) of the orchids of the Catoctin Mountains, Frederick County, Maryland reveals that 19 of 21 species have experienced precipitous declines. Four of these species are currently considered Threatened or Endangered by the State of Maryland and another two are considered Rare. Annual census data at 167 sites from throughout the Catoctin Mountains on protected and unprotected lands (private and public) show a loss of three species from the study area, a decline of[90 % (ranging from 99 to 91 %) in seven species, and a decline of \90 % (ranging from 51 to 87 %) for nine species. Each species was analyzed using Ordinary Least Squares Analysis to show trends and document corresponding R2 and p values. We tested the hypothesis that this decline is due to intensified herbivory by white-tailed deer. The overall orchid census data is sig- nificantly inversely-correlated (R =-0.93) to the white-tailed deer harvest data of Frederick County (a surrogate for population size), which includes the entirety of the study area. Platanthera ciliaris showed a huge expansion at a single site explicitly managed for this species otherwise this orchid showed a decline similar to the other species. Proper management is critical for the continuation of the orchid species in this study, be it control of the white-tailed deer herd or combating woody plant succession in the case of P. -
Conservation Assessment for White Adder's Mouth Orchid (Malaxis B Brachypoda)
Conservation Assessment for White Adder’s Mouth Orchid (Malaxis B Brachypoda) (A. Gray) Fernald Photo: Kenneth J. Sytsma USDA Forest Service, Eastern Region April 2003 Jan Schultz 2727 N Lincoln Road Escanaba, MI 49829 906-786-4062 This Conservation Assessment was prepared to compile the published and unpublished information on Malaxis brachypoda (A. Gray) Fernald. This is an administrative study only and does not represent a management decision or direction by the U.S. Forest Service. Though the best scientific information available was gathered and reported in preparation for this document and subsequently reviewed by subject experts, it is expected that new information will arise. In the spirit of continuous learning and adaptive management, if the reader has information that will assist in conserving the subject taxon, please contact: Eastern Region, USDA Forest Service, Threatened and Endangered Species Program, 310 Wisconsin Avenue, Milwaukee, Wisconsin 53203. Conservation Assessment for White Adder’s Mouth Orchid (Malaxis Brachypoda) (A. Gray) Fernald 2 TABLE OF CONTENTS TABLE OF CONTENTS .................................................................................................................1 ACKNOWLEDGEMENTS..............................................................................................................2 EXECUTIVE SUMMARY ..............................................................................................................3 INTRODUCTION/OBJECTIVES ...................................................................................................3 -
Streamside Bird Monitoring Protocol for the Eastern Rivers and Mountains Network Protocol Narrative Version 3.0
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science Streamside Bird Monitoring Protocol for the Eastern Rivers and Mountains Network Protocol Narrative Version 3.0 Natural Resource Report NPS/ERMN/NRR—2016/1224 ON THE COVER Ovenbird (Seiurus aurocapilla) is among the most frequently encountered bird species in the ERMN. Photograph ©: Bill Thompson Streamside Bird Monitoring Protocol for the Eastern Rivers and Mountains Network Protocol Narrative Version 3.0 Natural Resource Report NPS/ERMN/NRR—2016/1224 Matthew Marshall, Caleb Tzilkowski, and Kristina Callahan National Park Service Eastern Rivers and Mountains Network University Park, PA 16802 May 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. The series supports the advancement of science, informed decision-making, and the achievement of the National Park Service mission. The series also provides a forum for presenting more lengthy results that may not be accepted by publications with page limitations. All manuscripts in the series receive the appropriate level of peer review to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and designed and published in a professional manner. -
Systematics, Phylogeography, Fungal Associations, and Photosynthesis
Systematics, Phylogeography, Fungal Associations, and Photosynthesis Gene Evolution in the Fully Mycoheterotrophic Corallorhiza striata Species Complex (Orchidaceae: Epidendroideae) Dissertation Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Craig Francis Barrett, M. S. Evolution, Ecology, and Organismal Biology ***** The Ohio State University 2010 Dissertation Committee: Dr. John V. Freudenstein, Advisor Dr. John W. Wenzel Dr. Andrea D. Wolfe Copyright by Craig Francis Barrett 2010 ABSTRACT Corallorhiza is a genus of obligately mycoheterotrophic (fungus-eating) orchids that presents a unique opportunity to study phylogeography, taxonomy, fungal host specificity, and photosynthesis gene evolution. The photosysnthesis gene rbcL was sequenced for nearly all members of the genus Corallorhiza; evidence for pseudogene formation was found in both the C. striata and C. maculata complexes, suggesting multiple independent transitions to complete heterotrophy. Corallorhiza may serve as an exemplary system in which to study the plastid genomic consequences of full mycoheterotrophy due to relaxed selection on photosynthetic apparatus. Corallorhiza striata is a highly variable species complex distributed from Mexico to Canada. In an investigation of molecular and morphological variation, four plastid DNA clades were identified, displaying statistically significant differences in floral morphology. The biogeography of C. striata is more complex than previously hypothesized, with two main plastid lineages present in both Mexico and northern North America. These findings add to a growing body of phylogeographic data on organisms sharing this common distribution. To investigate fungal host specificity in the C. striata complex, I sequenced plastid DNA for orchids and nuclear DNA for fungi (n=107 individuals), and found that ii the four plastid clades associate with divergent sets of ectomycorrhizal fungi; all within a single, variable species, Tomentella fuscocinerea.