bioRxiv preprint doi: https://doi.org/10.1101/2021.03.31.437901; this version posted June 9, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data Doaa Hassan1,4, Daniel Acevedo1,5, Swapna Vidhur Daulatabad1, Quoseena Mir1, Sarath Chandra Janga1,2,3 1. Department of BioHealth Informatics, School of Informatics and Computing, Indiana University Purdue University, 535 West Michigan Street, Indianapolis, Indiana 46202 2. Department of Medical and Molecular Genetics, Indiana University School of Medicine, Medical Research and Library Building, 975 West Walnut Street, Indianapolis, Indiana, 46202 3. Centre for Computational Biology and Bioinformatics, Indiana University School of Medicine, 5021 Health Information and Translational Sciences (HITS), 410 West 10th Street, Indianapolis, Indiana, 46202 4. Computers and Systems Department, National Telecommunication Institute, Cairo, Egypt. 5. Computer Science Department, University of Texas Rio Grande Valley Keywords: RNA modifications, Pseudouridine, Nanopore *Correspondence should be addressed to: Sarath Chandra Janga (
[email protected]) Informatics and Communications Technology Complex, IT475H 535 West Michigan Street Indianapolis, IN 46202 317 278 4147 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.31.437901; this version posted June 9, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license.