Molecular Detection of Hematodinium Spp. in Norway Lobster Nephrops Norvegicus and Other Crustaceans
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DISEASES OF AQUATIC ORGANISMS Vol. 69: 185–195, 2006 Published April 6 Dis Aquat Org Molecular detection of Hematodinium spp. in Norway lobster Nephrops norvegicus and other crustaceans H. J. Small1, 4,*, D. M. Neil1, A. C. Taylor1, R. J. A. Atkinson2, G. H. Coombs3 1Division of Environmental and Evolutionary Biology, and 3Division of Infection & Immunity, Institute of Biomedical and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK 2University Marine Biological Association, Millport, Isle of Cumbrae KA28 0EG, UK 4Present address: Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, Virginia 23062, USA ABSTRACT: The Norway lobster Nephrops norvegicus (L.) from the coastal waters of Scotland is seasonally infected by a parasitic dinoflagellate of the genus Hematodinium. Methods used to detect infection include a morphological index (pleopod diagnosis) and several immunoassays. The present study describes the development and application of a set of Hematodinium-specific polymerase chain reaction (PCR) primers and DNA probes based on Hematodinium ribosomal DNA (rDNA). In the PCR assay, a diagnostic band of 380 bp was consistently amplified from total genomic DNA isolated from Hematodinium-infected N. norvegicus. The sensitivity of the assay was 1 ng DNA, which is equivalent to 0.6 parasites. The primer pair also detected Hematodinium DNA in preparations of the amphipod Orchomene nanus, indicating that the amphipod may be infected with the same Hemato- dinium sp. infecting N. norvegicus. DNA probes detected Hematodinium parasites in heart, hepatopancreas and gill tissues from N. norvegicus, and hepatopancreas and gill tissues from Carcinus maenas, confirming Hematodinium infection in the latter. KEY WORDS: Hematodinium · Parasite · Norway lobster · Molecular detection Resale or republication not permitted without written consent of the publisher INTRODUCTION 1996), Ovalipes ocellatus (MacLean & Ruddell 1978) and Portunus pelagicus (Hudson & Shields 1994). In Infection of the Norway lobster Nephrops norvegi- each of the above examples, infection by Hemato- cus by a parasitic dinoflagellate of the genus Hemato- dinium species caused serious mortalities in the host dinium has been described from a number of locations decapod population. around the West Coast of Scotland and the Irish Sea Previous methods to diagnose infection of Nephrops (Field et al. 1992, 1998, Briggs & McAliskey 1996, 2002, norvegicus by Hematodinium species include an Appleton et al. 1997). In UK waters, the edible crab assessment of the external colouration of the carapace Cancer pagurus has also recently been found to har- and appendages of infected lobsters. However this bour Hematodinium spp. (Stentiford et al. 2002). Para- diagnostic method lacks sensitivity and only advanced sitic Hematodinium species have previously been infections can be reliably identified (Stentiford et al. reported infecting several decapod crustaceans includ- 2001a). The pleopods of infected lobsters can be exam- ing Callinectes sapidus (Newman & Johnson 1975, ined under low power light microscopy for the aggre- Messick 1994, Messick & Shields 2000), Cancer pagu- gation of parasites in the vasculature (Field & Appleton rus (Latrouite et al. 1988), Chionoecetes bairdi (Meyers 1995). The severity of infection was classified on a et al. 1987, Love et al. 1993), Chionoecetes opilio (Tay- 5-point scale, from apparently uninfected to an ad- lor & Khan 1995), Necora puber (Wilhelm & Mialhe vanced infection. The pleopod method is reliable as a *Email: [email protected] © Inter-Research 2006 · www.int-res.com 186 Dis Aquat Org 69: 185–195, 2006 field method for identifying advanced infections, but and uninfected haemolymph samples were retained cannot detect tissue-based and low-level haemolymph for DNA isolation. For lobsters having a low-level infection. Immunological methods including an indi- infection (as indicated by ELISA), a subsample of the rect fluorescent antibody technique (IFAT), Western same haemolymph was used to estimate parasite cell blot and enzyme linked immunosorbent assay (ELISA) numbers (ml haemolymph–1) using an improved Neu- have all been developed using a polyclonal rabbit anti- bauer counting chamber. serum raised against a mixed in vitro culture of vegeta- Tissue samples from infected and uninfected lobsters tive forms of Hematodinium from N. norvegicus (Field were fixed in Davidson’s seawater fixative (20 ml & Appleton 1996, Stentiford et al. 2001b, Small et al. formalin [40% v/v], 10 ml glycerol, 10 ml glacial acetic 2002). However, the polyclonal antibody cross-reacts acid, 30 ml 100% ethanol, 30 ml seawater) for 24 h, with epitopes found on other protozoan parasites dehydrated in an ethanol series and embedded in (Bushek et al. 2002) and may not recognise in vivo life paraffin wax. Several other samples of haemolymph cycle stages of Hematodinium species that were ab- and tissue from crustacean and dinoflagellate species sent from the original innoculum or present only in commonly found in UK waters were also retained and other hosts. Because of the above concerns and the prepared for DNA extraction (see Table 1). Davidson’s need for more sensitive and specific diagnostic fixed-tissue sections from a shore crab (Carcinus methods, a molecular approach to parasite detection maenas) collected from the English Channel with was undertaken. a probable Hematodinium infection were obtained DNA-based diagnostic methods utilising the poly- from Dr. G. Stentiford (CEFAS Weymouth Laboratory). merase chain reaction (PCR) and in situ hybridisation H. perezi cells from in vitro culture (Small 2004) were (ISH) assays have facilitated diagnosis of many marine preserved in 100% ethanol prior to DNA extraction. pathogens of shellfish (for review see Cunningham To amplify parasite DNA for oligonucleotide primer 2002). Nuclear ribosomal DNA (rDNA) is widely design, 1 × 105 parasites from an in vitro culture of acknowledged as a useful target for the definition of Hematodinium sp. isolated from the Norway lobster genetic markers informative at several levels (Gasser & (Appleton & Vickerman 1998) were collected by centri- Zhu 1999). The rate of evolution varies between differ- fugation (1000 × g for 4 min at 4°C), the resultant super- ent regions of rDNA, resulting in target sequences natant was removed, and the sedimented cells pro- ranging from highly conserved to highly variable cessed for DNA extraction (see next subsection). The (Hillis & Dixon 1991). PCR primers used to diagnose same centrifugation procedure was also carried out for Hematodinium infection in crustacean hosts have pre- the free-living dinoflagellates Alexandrium tamarense viously been reported (Hudson & Adlard 1994, Gruebl (Culture Collection of Algae and Protozoa, CCAP et al. 2002). However, both primer sets used in those 1119/5), Gymnodinium catenatum (CCAP 1117/6) studies were located in the conserved 18S and 5.8S (both 1 × 105 cells), H. perezi and a Mesanophrys-like regions of the rDNA complex and are not specific for parasitic ciliate (5 × 104 cells) prior to DNA extraction. individual Hematodinium species. Variable regions of To examine a possible secondary host for the Hema- rDNA from other dinoflagellates have been identified todinium sp. infecting Nephrops norvegicus, amphi- allowing species-specific PCR assays to be developed pods Orchomene nanus were captured in baited traps (Litaker et al. 2003). We describe herein the develop- from the Hunterston Channel in the Clyde Sea area in ment and application of PCR and ISH assays for detec- August 2001, March 2003 and August 2003, according tion of Hematodinium species infection in Nephrops to the method of Moore & Wong (1995). Previous stud- norvegicus and other crustaceans. ies had indicated that there was a high prevalence of Hematodinium sp. infection of Norway lobsters at this location (J. Atkinson pers. comm.). Individual O. nanus MATERIALS AND METHODS were held for 3 d in seawater at 12°C prior to preserva- tion in 100% ethanol or Davidson’s seawater fixative Sample collection and preparation. Norway lobsters (only the March 2003 and August 2003 samples). Nephrops norvegicus and other crustaceans used in Genomic DNA samples were prepared from each this study (unless indicated otherwise) were caught by amphipod and assayed by PCR for the presence of otter bottom-trawl (70 mm mesh size) south of Little Hematodinium spp. Cumbrae in the Clyde Sea Area, Scotland, UK. DNA extraction. Genomic DNA was extracted from Haemolymph samples were taken from the base of the 100 µl haemolymph samples, 100 mg tissue samples, fifth pereiopod, using a sterile 1 ml disposable syringe the in vitro Hematodinium sp., ciliate and dinoflagel- and 25-gauge needle, and were frozen at –20°C. Sam- late pellets, and from individual whole Orchomene ples were assayed for the presence of Hematodinium nanus according to standard procedures (Sambrook by the ELISA method of Small et al. (2002). Infected et al. 1989). Briefly, samples were homogenised/ Small et al.: Molecular detection of Hematodinium spp. 187 resuspended in 250 µl extraction buffer (50 mM Tris, software/BOX_form.html). Sequences were compared 5 mM EDTA, 100 mM NaCl, pH 8), 100 µl of 10% for similarity to those of other dinoflagellates by Basic SDS (w/v) and Proteinase K (0.28 ng µl–1) and incu- Local Alignment Tool searches (BLAST; Altschul et al. bated at 56°C for 18 to 24 h. All DNAs were purified 1990) in GenBank. Suitable priming regions for PCR by single-step standard phenol/chloroform