Draft Plant Propagation Protocol
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Mckayla Stevens, Donald H. Mansfield James F. Smith Mary Ann E. Feist
RESOLVING THE ANOMALY OF LOMATIUM ANOMALUM: DISCOVERY OF A NEW SPECIES IN SOUTHWESTERN IDAHO (U.S.A.), LOMATIUM ANDRUSIANUM (APIACEAE) Mckayla Stevens, Donald H. Mansfield James F. Smith The College of Idaho Boise State University 2112 Cleveland Blvd. 1910 W. University Drive Caldwell, Idaho 83605, U.S.A. Boise, Idaho 83725, U.S.A. Mary Ann E. Feist University of Wisconsin-Madison 430 Lincoln Drive Madison, Wisconsin 53706, U.S.A. ABSTRACT Apparent polyphyly within the unresolved clade of Lomatium (Apiaceae) containing L. triternatum, L. anomalum, L. thompsonii, and L. pack- ardiae suggests conflict among current taxonomic classification schemes. To recover this clade and more clearly define species boundaries, we examined populations of L. anomalum from three geographic regions in Idaho and adjacent Oregon. Using phylogenetic, morphological, and ecological data, we conclude that the L. anomalum complex currently circumscribes multiple species. Phylogenetic analysis of the nuclear ribosomal ITS and ETS, and cpDNA rpl32-trnLUAG, rps-16 intron, trnD-trnT, ndhA intron, and psbA-trnH recovered populations from the Boise foothills as a distinct, monophyletic clade. Principal Components Analysis of 30 reproductive and vegetative characters show two distinct groups: one of Boise foothills and one of the combined Mann Creek and Camas Prairie vicinities. Principal Components Analysis of 16 soil characteristics show that soils occupied by Boise foothills populations are distinct from those occupied by Mann Creek and Camas Prairie populations. Based on phylogenetic, morphometric, and ecologic criteria, populations of what had been considered L. anomalum from the Boise foothills and vicinity are here described as a new species—Lomatium andrusianum. -
Phylogenetic Relationships Among the Perennial
Plant Div. Evol. Vol. 128/1–2, 151–172 E Stuttgart, August 20, 2010 Phylogenetic relationships among the perennial, endemic Apiaceae subfamily Apioideae of western North America: additional data from the cpDNA trnF-trnL-trnT region continue to support a highly polyphyletic Cymopterus By Feng-Jie Sun and Stephen R. Downie With 3 figures and 3 tables Abstract Sun, F.-J. & Downie, S.R.: Phylogenetic relationships among the perennial, endemic Apiaceae sub- family Apioideae of western North America: additional data from the cpDNA trnF-trnL-trnT region continue to support a highly polyphyletic Cymopterus. — Plant Div. Evol. 128: 151–172. 2010. — ISSN 1869-6155. Considerable confusion exists with regard to the delimitation of Cymopterus and its relationship to the other herbaceous, perennial genera of Apiaceae subfamily Apioideae endemic to western North Amer- ica north of Mexico. Previous molecular systematic studies using nrDNA ITS and cpDNA rps16 in- tron sequences have shown that the genus Cymopterus is highly polyphyletic, with its species inextri- cably linked with those of Aletes, Lomatium, Oreoxis, Pseudocymopterus, Pteryxia, and several other genera of the region. The general lack of resolution of these trees and their overall low branch support values, however, suggested that additional data might be useful to establish monophyly of genera or identify major clades for further phylogenetic and revisionary studies. In this study, we analyze cpD- NA trnF-trnL-trnT sequence data from 129 accessions of North American Apioideae (representing 111 species and 21 genera) using maximum parsimony, maximum likelihood and Bayesian inference methods individually and in combination with ITS and rps16 intron sequence data available through previous phylogenetic studies for the same set of accessions. -
The Leipzig Catalogue of Plants (LCVP) ‐ an Improved Taxonomic Reference List for All Known Vascular Plants
Freiberg et al: The Leipzig Catalogue of Plants (LCVP) ‐ An improved taxonomic reference list for all known vascular plants Supplementary file 3: Literature used to compile LCVP ordered by plant families 1 Acanthaceae AROLLA, RAJENDER GOUD; CHERUKUPALLI, NEERAJA; KHAREEDU, VENKATESWARA RAO; VUDEM, DASHAVANTHA REDDY (2015): DNA barcoding and haplotyping in different Species of Andrographis. In: Biochemical Systematics and Ecology 62, p. 91–97. DOI: 10.1016/j.bse.2015.08.001. BORG, AGNETA JULIA; MCDADE, LUCINDA A.; SCHÖNENBERGER, JÜRGEN (2008): Molecular Phylogenetics and morphological Evolution of Thunbergioideae (Acanthaceae). In: Taxon 57 (3), p. 811–822. DOI: 10.1002/tax.573012. CARINE, MARK A.; SCOTLAND, ROBERT W. (2002): Classification of Strobilanthinae (Acanthaceae): Trying to Classify the Unclassifiable? In: Taxon 51 (2), p. 259–279. DOI: 10.2307/1554926. CÔRTES, ANA LUIZA A.; DANIEL, THOMAS F.; RAPINI, ALESSANDRO (2016): Taxonomic Revision of the Genus Schaueria (Acanthaceae). In: Plant Systematics and Evolution 302 (7), p. 819–851. DOI: 10.1007/s00606-016-1301-y. CÔRTES, ANA LUIZA A.; RAPINI, ALESSANDRO; DANIEL, THOMAS F. (2015): The Tetramerium Lineage (Acanthaceae: Justicieae) does not support the Pleistocene Arc Hypothesis for South American seasonally dry Forests. In: American Journal of Botany 102 (6), p. 992–1007. DOI: 10.3732/ajb.1400558. DANIEL, THOMAS F.; MCDADE, LUCINDA A. (2014): Nelsonioideae (Lamiales: Acanthaceae): Revision of Genera and Catalog of Species. In: Aliso 32 (1), p. 1–45. DOI: 10.5642/aliso.20143201.02. EZCURRA, CECILIA (2002): El Género Justicia (Acanthaceae) en Sudamérica Austral. In: Annals of the Missouri Botanical Garden 89, p. 225–280. FISHER, AMANDA E.; MCDADE, LUCINDA A.; KIEL, CARRIE A.; KHOSHRAVESH, ROXANNE; JOHNSON, MELISSA A.; STATA, MATT ET AL. -
Developing Standardized Survey and Monitoring Protocols for Four Threatened and Endangered Willamette Valley Prairie Plant Species RAM TURE G
Developing standardized survey and monitoring protocols for four threatened and endangered Willamette Valley prairie plant species RAM TURE G L Final R eport N PRO GRICU O T OF A T OF ERVATI N RTME CONS A T E PLAN ON DEP V Prepared by Rebecca Currin and Robert Meinke NATI OREG for U.S. Fish and Wildlife Service (under Grant No. OR-EP-2, Seg. 22) September 27, 2013 Table of contents Acknowledgements ................................................................................................................... 1 Document citation ..................................................................................................................... 2 Contact information .................................................................................................................. 2 1. Introduction ........................................................................................................................... 3 2. Background information ....................................................................................................... 5 2.1 Study area (Willamette Valley prairies) ......................................................................... 5 2.2 Study species ................................................................................................................... 6 2.2.1 Bradshaw’s lomatium .............................................................................................. 6 2.2.2 Kincaid’s lupine ...................................................................................................... -
Checklist of Vascular Plants of the Southern Rocky Mountain Region
Checklist of Vascular Plants of the Southern Rocky Mountain Region (VERSION 3) NEIL SNOW Herbarium Pacificum Bernice P. Bishop Museum 1525 Bernice Street Honolulu, HI 96817 [email protected] Suggested citation: Snow, N. 2009. Checklist of Vascular Plants of the Southern Rocky Mountain Region (Version 3). 316 pp. Retrievable from the Colorado Native Plant Society (http://www.conps.org/plant_lists.html). The author retains the rights irrespective of its electronic posting. Please circulate freely. 1 Snow, N. January 2009. Checklist of Vascular Plants of the Southern Rocky Mountain Region. (Version 3). Dedication To all who work on behalf of the conservation of species and ecosystems. Abbreviated Table of Contents Fern Allies and Ferns.........................................................................................................12 Gymnopserms ....................................................................................................................19 Angiosperms ......................................................................................................................21 Amaranthaceae ............................................................................................................23 Apiaceae ......................................................................................................................31 Asteraceae....................................................................................................................38 Boraginaceae ...............................................................................................................98 -
Columbines and Wizardry Advanced Apprenticeship
Columbines School of Botanical Studies Second Year Apprenticeship Program Pinus ponderosa Zone May 6, 8, 2018 Ponderosa Pine one and Riparian 2784' Trip 5 http://www.botanicalstudies.net/botany/plantlists.php FamilyFamily # Genus Name Uses Seen Araceae Lysichiton americanus (L. Skunk Cabbage +/- Edible X americanum) Liliaceae Fritillaria atropurpurea Checker Lily No Pick X Fritillaria affinis (F. lanceolata) Checker Lily No Pick X Lilium sp. Lily No Pick Asparagaceae (Liliaceae) Leucocrinum montanum Sand Lily No Pick Maianthemum racemosum Large False Solomon's Seal Edible, Medicinal (Smilacina racemosa) Maianthemum stellatum (Smilacina Small False Solomon's Seal Edible, Medicinal stellata) Melanthiaceae (Liliaceae) Trillium ovatum Trillium No Pick Veratrum sp. False Hellebore Poisonous X Iridaceae Iris missourienis Western Iris Poisonous, Medicinal Orchidaceae Calypso bulbosa Calypso No Pick Cupressaceae Calocedrus decurrens Incense Cedar Medicinal X Pinaceae Pinus ponderosa Ponderosa Pine Edible X Aristolochiaceae Asarum caudatum Wild Ginger Edible, Medicinal Polygonaceae Eriogonum sp. Wild Buckwheat Edible, Medicinal Columbines School of Botanical Studies Second Year Apprenticeship Program Pinus ponderosa Zone FamilyFamily # Genus Name Uses Seen Polygonaceae Rumex obtusifolius Yellow Dock, Bitter Dock Edible, Medicinal Montiaceae (Portulacaceae) Montia perfoliata Miner's Lettuce Edible X Montia sibirica Candyflower Edible Caryophyllaceae Arenaria macrophylla Sandwort Unknown X Paeoniaceae Paeonia brownii Peony Medicinal X Ranunculaceae Anemone lyallii Small Windflower Poisonous Aquilegia formosa Columbine Poisonous X Delphinium sp. Larkspur Poisonous X Ranunculus uncinatus Woods Buttercup Poisonous Thalictrum sp. Meadow-rue Poisonous Berberidaceae Berberis aquifolium Tall Oregon Grape Edible, Medicinal Berberis repens Creeping Oregon Grape Edible, Medicinal X Brassicaceae (Cruciferae) Arabis sp. Rock Cress Edible/Spice Draba sp. Whitlow Grass Edible/Spice Saxifragaceae Heuchera sp. -
Stephen R. Downie, Ph.D
Stephen R. Downie, Ph.D. Department of Plant Biology Home: 239 Morrill Hall, 505 South Goodwin Avenue 209 West Delaware Avenue University of Illinois at Urbana-Champaign Urbana, Illinois 61801-4904 USA Urbana, Illinois 61801-3707 USA Cellular phone: (217) 649-4559 Office Phone: (217) 333-1275 FAX: (217) 244-7246 E-mail: [email protected] Laboratory homepage: http://www.life.illinois.edu/downie/ Department homepage: http://sib.illinois.edu/profile/sdownie Academic profiles available in: ResearchGate (https://www.researchgate.net/profile/Stephen_Downie) Google Scholar (https://scholar.google.com/citations?user=NWLv2c0AAAAJ&hl=en) LinkedIn (https://www.linkedin.com/in/stephen-r-downie-1913a445/) Scopus (https://www.scopus.com/authid/detail.uri?authorId=7005106518) Education Ph.D., Plant Taxonomy, 1987 Department of Botany, University of Alberta, Edmonton, Canada (Sept 1982 – Mar 1987) A biosystematic study of Arnica subgenus Arctica (Asteraceae) Advisor: Keith E. Denford B.Sc., Specialized Honours Botany, 1982 University of Guelph, Ontario, Canada (Sept 1978 – May 1982) Professional Experience Current Positions at University of Illinois: Curator, University of Illinois Vascular Plant Herbarium (ILL) (Mar 2019 – present) Associate Director of Academic Affairs, School of Integrative Biology (Aug 2017 – present) Director, Graduate Assistance in Areas of National Need (GAANN) program (Sept 2016 – Dec 2020) Professor, Dept of Plant Biology (Aug 2004 – present) Faculty Member, Program in Ecology, Evolution and Conservation Biology (Jun 1998 -
Common Plants of the Upper Klamath Basin
Common Plants of the Upper Klamath Basin Technical Layout & Design .........Michael Calonje Editor ................................................Sarah Malaby Plant Descriptions & Text ..............Molly Juillerat, Ron Larson, Sarah Malaby, Jeanne Skalka. Photography ...........Michael Calonje, Ron Larson, Sarah Malaby, Terry Spivey. A Special acknowledgement to Klamath County Commissioners Al Switzer, John Elliott and Bill Brown for providing funding for publication costs through PL 06-393 Title III “Secure Rural Schools and Community Self-Determination Act of 2000” Oregon Native Plant Society - Klamath Basin Chapter Rabe Consulting 2007 CONTENTS Introduction ...................................................................................3 Overview ........................................................................................3 Habitats ..........................................................................................4 Plant Exploration in the Upper Klamath Basin .........................6 Growing Native Plants ..................................................................6 Species Groups ..............................................................................7 Ferns and Horsetails ..................................................................7 Conifers .....................................................................................8 Flowering Plants: Flowers, Hardwood Trees, and Shrubs .......9 Flowering Plants: Grasses and Grass-like Plants ...................9 Lichens, Bryophytes, and Blue-green -
Angiosperm Phylogeny Based on 18S/26S Rdna Sequence Data: Constructing a Large Data Set Using Next-Generation Sequence Data Author(S): Vitor H
Angiosperm Phylogeny Based on 18S/26S rDNA Sequence Data: Constructing a Large Data Set Using Next-Generation Sequence Data Author(s): Vitor H. Maia, Matthew A. Gitzendanner, Pamela S. Soltis, Gane Ka-Shu Wong, and Douglas E. Soltis Source: International Journal of Plant Sciences, Vol. 175, No. 6 (July/August 2014), pp. 613- 650 Published by: The University of Chicago Press Stable URL: http://www.jstor.org/stable/10.1086/676675 . Accessed: 02/11/2015 13:34 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press is collaborating with JSTOR to digitize, preserve and extend access to International Journal of Plant Sciences. http://www.jstor.org This content downloaded from 23.235.32.0 on Mon, 2 Nov 2015 13:34:26 PM All use subject to JSTOR Terms and Conditions Int. J. Plant Sci. 175(6):613–650. 2014. ᭧ 2014 by The University of Chicago. All rights reserved. 1058-5893/2014/17506-0001$15.00 DOI: 10.1086/676675 ANGIOSPERM PHYLOGENY BASED ON 18S/26S rDNA SEQUENCE DATA: CONSTRUCTING A LARGE DATA SET USING NEXT-GENERATION SEQUENCE DATA Vitor H. Maia,*,†,‡ Matthew A. -
CURRICULUM VITAE Pamela S. Soltis Distinguished Professor And
CURRICULUM VITAE Pamela S. Soltis Distinguished Professor and Curator Florida Museum of Natural History University of Florida Gainesville, FL 32611 (352) 273-1964 (352) 846-2154 (fax) [email protected] Birthdate: 13 November 1957. Nelsonville, Ohio Home Address and Phone: 2710 NW 26th Place Gainesville, FL 32605 (352) 373-5587 Education: Graduated Pella High School, Pella, Iowa, 1976, Valedictorian National Merit Finalist, 1976 B. A. (Biology), Central College, 1980, summa cum laude M. Phil. (Botany), University of Kansas, 1984, with Honors Ph.D. (Botany), University of Kansas, 1986 Present Position: Curator, Florida Museum of Natural History, University of Florida, 2000- Distinguished Professor, Florida Museum of Natural History, University of Florida, 2007- Previous Positions: Co-Director, UF Computational Biology Program, 2009-12 University of Florida Research Foundation Research Professor, 2006-09 Assistant Professor, Department of Botany, Washington State University, 1986-92 Associate Professor, Department of Botany, Washington State University, 1992-98 Professor, Department of Botany/School of Biological Sciences, Washington State University, 1998-2000 Professional Service: Society Service: Strategic Planning Committee, Botanical Society of America, 2014 Merit Awards Committee, Botanical Society of America, 2013-15 Nominating Committee, Society of Systematic Biologists, 2009-11 President-Elect, President, Past President, Botanical Society of America, 2006-09 1 Co-organizer, Women in Botany Luncheon and Program, Botanical Society -
Based on Phylogenetic Analyses of Nuclear (ITS) and Plastid (Rps16 Intron) DNA Sequences
South African Journal of Botany 2004, 70(3): 407–416 Copyright © NISC Pty Ltd Printed in South Africa — All rights reserved SOUTH AFRICAN JOURNAL OF BOTANY ISSN 0254–6299 A molecular systematic investigation of Cymopterus and its allies (Apiaceae) based on phylogenetic analyses of nuclear (ITS) and plastid (rps16 intron) DNA sequences F-J Sun and SR Downie* Department of Plant Biology, University of Illinois, Urbana 61801, United States of America * Corresponding author, email: [email protected] Received 5 September 2003, accepted in revised form 7 November 2003 Considerable controversy exists with regard to the maximum likelihood methods. For those trees exhibit- proper delimitation of Cymopterus (Apiaceae subfamily ing the greatest resolution, the results revealed that the Apioideae) and its relationship to the other perennial perennial, endemic apioid genera of North America endemic umbellifers of western North America. (north of Mexico) comprise a weakly supported mono- Previous molecular systematic studies using nuclear phyletic group, with Angelica constituting its sister line- (rDNA ITS) and, for subsets of taxa, plastid (rps16 intron age. Cymopterus is confirmed as highly polyphyletic. and trnF-trnL-trnT) DNA sequences have revealed that The rps16 intron yielded substantially fewer parsimony the genus Cymopterus is polyphyletic, with its species informative characters than those of the ITS region and inextricably linked with those of Aletes, Lomatium, when analysed, separately or in combination, with ITS Musineon, Oreoxis, Pseudocymopterus, Pteryxia, data, resulted in trees of poor resolution. Only one pre- Tauschia, and several other genera of the region. viously identified species group of Cymopterus is sup- Herein, in an effort to increase resolution of relation- ported as monophyletic; this group coincides with sec- ships, we procured rps16 intron sequence data from 74 tion Phellopterus, and is recognised by its showy, accessions of Cymopterus and its allies so that ITS and basally connate bractlets. -
Apiaceae [Umbelliferae] of Alberta
AN ILLUSTRATED KEY TO THE APIACEAE [UMBELLIFERAE] OF ALBERTA Compiled and written by Linda Kershaw & Lorna Allen September 2019 © Linda J. Kershaw & Lorna Allen This key was compiled using information primarily from Moss (1983), Hitchcock et. al. (1955-69), Douglas et al. (1998), Lesica 2012, and Gleason and Cronquist (1991). Taxonomy follows VASCAN (Brouillet, 2019). The main references are listed at the end of the key. Please let us know if there are ways in which the keys can be improved. The 2018 S-ranks of rare species (S1; S1S2; S2; S2S3; SH; SU, according to ACIMS, 2018) are noted in superscript (S1;S2;SU) after the species names. For more details go to the ACIMS web site. Similarly, exotic species are followed by a superscript X, XX if noxious and XXX if prohibited noxious (X; XX; XXX) according to the Alberta Weed Control Act (2016). APIACEAE [UMBELLIFERAE] Carrot Family Key to Genera 01a Lowest leaves simple, undivided . 02 01b Lowest leaves (and the upper) deeply lobed or divided into leaflets or linear segments . .04 02a Leaves smooth-edged, linear-lance-shaped to oblong . Bupleurum americanum S2 3a 02b Leaves toothed, the lowest ± heart-shaped, 2a the upper commonly deeply lobed or divided into leaflets . 03 03a Plants usually with a bluish tinge; flowers white, in dense round heads with a ring of spiny bracts at the base Eryngium planum X 03b Plants not blue-tinged; flowers bright yellow, in umbrella-shaped clusters with spokes without spiny bracts . .Zizia aptera 04a Leaves with 5-7, toothed leaflets radiating from the base; fruits covered in short, hooked 3b spines/prickles .