Plant Pathogens in Irrigation Water: Challenges and Opportunities C

Total Page:16

File Type:pdf, Size:1020Kb

Plant Pathogens in Irrigation Water: Challenges and Opportunities C This article was downloaded by: [EBSCOHost EJS Content Distribution - Current] On: 29 January 2011 Access details: Access Details: [subscription number 925797205] Publisher Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37- 41 Mortimer Street, London W1T 3JH, UK Critical Reviews in Plant Sciences Publication details, including instructions for authors and subscription information: http://www.informaworld.com/smpp/title~content=t713400911 Plant Pathogens in Irrigation Water: Challenges and Opportunities C. X. Honga; G. W. Moormanb a Department of Plant Pathology, Physiology, and Weed Science, Virginia Polytechnic Institute and State University, Hampton Roads Agricultural Research and Extension Center, Virginia Beach, VA b Department of Plant Pathology, The Pennsylvania State University, University Park, PA To cite this Article Hong, C. X. and Moorman, G. W.(2005) 'Plant Pathogens in Irrigation Water: Challenges and Opportunities', Critical Reviews in Plant Sciences, 24: 3, 189 — 208 To link to this Article: DOI: 10.1080/07352680591005838 URL: http://dx.doi.org/10.1080/07352680591005838 PLEASE SCROLL DOWN FOR ARTICLE Full terms and conditions of use: http://www.informaworld.com/terms-and-conditions-of-access.pdf This article may be used for research, teaching and private study purposes. Any substantial or systematic reproduction, re-distribution, re-selling, loan or sub-licensing, systematic supply or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express or implied or make any representation that the contents will be complete or accurate or up to date. The accuracy of any instructions, formulae and drug doses should be independently verified with primary sources. The publisher shall not be liable for any loss, actions, claims, proceedings, demand or costs or damages whatsoever or howsoever caused arising directly or indirectly in connection with or arising out of the use of this material. Critical Reviews in Plant Sciences, 24:189–208, 2005 Copyright c Taylor & Francis Inc. ISSN: 0735-2689 print / 1549-7836 online DOI: 10.1080/07352680591005838 Plant Pathogens in Irrigation Water: Challenges and Opportunities C. X. Hong Department of Plant Pathology, Physiology, and Weed Science, Virginia Polytechnic Institute and State University, Hampton Roads Agricultural Research and Extension Center, Virginia Beach, VA 23455-3315 G. W. Moorman Department of Plant Pathology, The Pennsylvania State University, University Park, PA 16802-4506 all that it contains is a potential risk factor, particularly if it must Plant pathogens in irrigation water were recognized early in be repeatedly applied to crops to compensate for limited rainfall the last century as a significant crop health issue. This issue has in- or made available at a specific time in the crop’s development. creased greatly in scope and degree of impact since that time and it If the water carries undesirable chemicals or microbes, an entire will continue to be a problem as agriculture increasingly depends crop can be lost. The subject of this review, the risk posed by on the use of recycled water. Plant pathogens detected from wa- ter resources include 17 species of Phytophthora,26ofPythium,27 the plant pathogens in irrigation water, was recognized early genera of fungi, 8 species of bacteria, 10 viruses, and 13 species of in the last century as a significant crop health issue (Bewley plant parasitic nematodes. There is substantial evidence demon- and Buddin, 1921; Oyler and Bewley, 1937). Whether the initial strating that contaminated irrigation water is a primary, if not the source of water harbors pathogens or pathogens enter the water sole, source of inoculum for Phytophthora diseases of numerous along the path of distribution, one consequence is the repeated nursery, fruit, and vegetable crops. These findings pose great chal- lenges and opportunities to the plant pathology community. A va- inoculation of plants with the pathogens. riety of water treatment methods are available but few have been The problem of plant pathogens in irrigation water is aggra- assessed for agricultural purposes under commercial conditions. vated by the increasing use of recycled water. Recycling irri- Investigations into their technical feasibility and economics are ur- gation in some locales is crucial to comply with stringent wa- gently needed. Aquatic ecology of plant pathogens is an emerging ter policies and regulations. As the concern over water scarcity field of research that holds great promise for developing ecologi- cally based water decontamination and other strategies of pathogen spreads, agricultural use of water resources is being more closely mitigation. Pathogen detection and monitoring as well as biological monitored and regulated by governments. In some localities, it is and economic thresholds are much-needed IPM tools and should mandated or considered highly desirable that runoff and leachate be priorities of future research. Teaming with hydrologists, agri- from irrigated agricultural areas be captured to prevent nitro- cultural engineers, ecologists, geneticists, economists, statisticians, gen, phosphorus, and pesticides from contaminating ground- and farmers is essential to effectively attack such a complex issue of growing global importance. Research should proceed in con- water and surface supplies (Kabashima, 1993; von Broembsen junction with nutrient and pesticide management studies in a co- et al., 2001; Norman et al., 2003). The trend in the United States ordinated and comprehensive approach as they are interrelated is for farms to be viewed as point sources of pollution. If desig- components of water resource conservation and protection. nated as such by regulatory agencies, farmers will be required to comply with some of the same regulations as manufacturers. Downloaded By: [EBSCOHost EJS Content Distribution - Current] At: 22:49 29 January 2011 Keywords aquatic ecology, biological threshold, pathogen detection Although farmers are forced to look at production methods in and monitoring, IPM, water resource conservation and new ways because of this possibility, it is important to note that protection most farm families live close to and utilize for personal purposes the same water resources used as for growing crops or raising livestock (Scarpa, 2000). Farmers too are very interested in pre- I. INTRODUCTION venting the degradation of the water and conserving this vital One factor common to all crop production is the need for resource. In the course of devising and implementing best water water. As a common denominator in growing plants, water and conservation management practices, the issue of plant pathogens in water has come to the forefront. There are reports of the presence of almost every major Address correspondence to C. X. Hong, Department of Plant Pathol- ogy, Physiology, and Weed Science, Virginia Polytechnic Institute and pathogen group in water. In this review, we will discuss the possi- State University, Hampton Roads Agricultural Research and Extension ble sources of plant pathogens in irrigation water, how irrigation Center, Virginia Beach, VA 23455-3315. E-mail: [email protected] may distribute these pathogens, the methods used to detect and 189 190 C. X. HONG AND G. W. MOORMAN monitor the presence of plant pathogens, and the current tech- impervious “ebb and flow” or “flood and drain” benches that are nology available for the mitigation of pathogens in water. Our temporarily flooded with water and then drained to tanks where objectives are to highlight selected papers that are the basis of the water is stored until pumped back onto the benches at the next our current understanding of the problem of plant pathogens in irrigation cycle. A variation of this technique, termed “flooded water and to point out what additional knowledge is needed to floor” irrigation, positions containers of plants on an impervi- attack this issue of global importance. ous floor with a surrounding low curbing that allows the entire production floor to be flooded to the depth of a few centime- II. WATER SOURCES, IRRIGATION METHODS, AND ters during irrigation and then drained away to a storage tank for PLANT PATHOGENS reuse. Equipment driven across these floors and workers travers- Well water seldom contains plant pathogens (McCarter- ing the area can be the means of introducing contaminated soil Zorner et al., 1984; Pottorff and Panter, 1997; Themann et al., to the water used to flood this area and ultimately to the holding 2002; Yun, 2003). If, however, the well is not cased or if the head tank and all the connecting plumbing. In hydroponic, nutrient is not sealed near the surface, runoff carrying sediment can enter film, and other methods of producing plants with bare roots, the the well and contaminate the water with plant pathogens. When main sources of pathogens are the initial water source, plants water is collected in cisterns recharged by rainfall from the roof, infected as seedlings and then placed in the system, pathogen- it may not necessarily be free of pathogens, but the number of contaminated soil allowed to get into the system, and the activity contaminant species would be limited (Rattink, 1991). Runoff of of insect vectors. surface water or wind-blown soil can contaminate water storage To summarize, the initial contamination with plant pathogens tanks, regardless of how the water is initially collected. Surface of the water supply used for irrigation
Recommended publications
  • Phytopythium: Molecular Phylogeny and Systematics
    Persoonia 34, 2015: 25–39 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158515X685382 Phytopythium: molecular phylogeny and systematics A.W.A.M. de Cock1, A.M. Lodhi2, T.L. Rintoul 3, K. Bala 3, G.P. Robideau3, Z. Gloria Abad4, M.D. Coffey 5, S. Shahzad 6, C.A. Lévesque 3 Key words Abstract The genus Phytopythium (Peronosporales) has been described, but a complete circumscription has not yet been presented. In the present paper we provide molecular-based evidence that members of Pythium COI clade K as described by Lévesque & de Cock (2004) belong to Phytopythium. Maximum likelihood and Bayesian LSU phylogenetic analysis of the nuclear ribosomal DNA (LSU and SSU) and mitochondrial DNA cytochrome oxidase Oomycetes subunit 1 (COI) as well as statistical analyses of pairwise distances strongly support the status of Phytopythium as Oomycota a separate phylogenetic entity. Phytopythium is morphologically intermediate between the genera Phytophthora Peronosporales and Pythium. It is unique in having papillate, internally proliferating sporangia and cylindrical or lobate antheridia. Phytopythium The formal transfer of clade K species to Phytopythium and a comparison with morphologically similar species of Pythiales the genera Pythium and Phytophthora is presented. A new species is described, Phytopythium mirpurense. SSU Article info Received: 28 January 2014; Accepted: 27 September 2014; Published: 30 October 2014. INTRODUCTION establish which species belong to clade K and to make new taxonomic combinations for these species. To achieve this The genus Pythium as defined by Pringsheim in 1858 was goal, phylogenies based on nuclear LSU rRNA (28S), SSU divided by Lévesque & de Cock (2004) into 11 clades based rRNA (18S) and mitochondrial DNA cytochrome oxidase1 (COI) on molecular systematic analyses.
    [Show full text]
  • CANOPY and LEAF GAS EXCHANGE ACCOMPANYING PYTHIUM ROOT ROT of LETTUCE and CHRYSANTHEMUM a Thesis Presented to the Faculty Of
    CANOPY AND LEAF GAS EXCHANGE ACCOMPANYING PYTHIUM ROOT ROT OF LETTUCE AND CHRYSANTHEMUM A Thesis Presented to The Faculty of Graduate Studies of The University of Guelph In partial ful filment of requirements for the degree of Master of Science January, 200 1 Q Melanie Beth Johnstone, 200 1 National Library Bibliothèque nationale 191 of Canada du Canada Acquisitions and Acquisitions et Bibliographic Services seivices bibliographiques 395 Wellington Street 395, me Wellington Ottawa ON KIA ON4 Ottawa ON K 1A ON4 Canada Canada The author has granted a non- L'auteur a accordé une licence non exclusive licence dowing the exclusive permettant à la National Library of Canada to Bibliothèque nationale du Canada de reproduce, loan, distribute or seil reproduire, prêter, distribuer ou copies of this thesis in rnicroform, vendre des copies de cette thèse sous paper or electronic formats. la forme de microfiche/film, de reproduction sur papier ou sur format électronique. The author retains ownership of the L'auteur conserve la propriété du copyright in this thesis. Neither the droit d'auteur qui protège cette thèse. thesis nor substanhal extracts fiom it Ni la thèse ni des extraits substantiels may be printed or othenvise de celle-ci ne doivent être imprimés reproduced without the author's ou autrement reproduits sans son permission. autorisation. ABSTRACT CAKOPY AND LEAF GAS EXCHANGE ACCOMPANYING PYTHIUMROOT ROT OF LETTUCE AND CHRYSANTHEMUM Melanie Beth Johnstone Advisors: University of Guelph, 2000 Professor B. Grodzinski Professor J.C. Sutton The first charactenzation of host carbon assimilation in response to Pythium infection is described. Hydroponic lettuce (Lactuca sativa L.
    [Show full text]
  • PROOF Biological Control of Pythium Root Rot of Chrysanthemum in Small-Scale Hydroponic Units
    PHYTOPATHOLOGY PROOF W. Liu et al. (2007) Phytoparasitica 35(2):xxx-xxx PROOF Biological Control of Pythium Root Rot of Chrysanthemum in Small-scale Hydroponic Units W. Liu,1 J.C. Sutton,1;∗ B. Grodzinski,2J.W. Kloepper3 and M.S. Reddy3 The capacity of several strains of root-colonizing bacteria to suppress Pythium aphanider- matum, Pythium dissotocum and root rot was investigated in chrysanthemums grown in single-plant hydroponic units containing an aerated nutrient solution. The strains were 4 −1 applied in the nutrient solution at a final density of 10 CFU ml and 14 days later the 4 root systems were inoculated with Pythium by immersion in suspensions of 10 zoospores −1 ml solution. Controls received no bacteria, no Pythium, or one of the Pythium spp. but no bacteria. Strain effectiveness was estimated based on percent roots colonized by Pythium and area under disease progress curves (AUDPC). In plants treated respectively with Pseudomonas (Ps.) chlororaphis 63-28 and Bacillus cereus HY06 and inoculated with P. aphanidermatum, root colonization by the pathogen was 83% and 72% lower than in the pathogen control, and AUDPC value was reduced by 61% and 65%. For P. dissotocum, the respective strains reduced root colonization by 87% and 91%, and AUDPC values by 70% and 90%. In plants treated respectively with Pseudomonas chlororaphis Tx-1 and Comamonas acidovorans c-4-7-28, root colonization by P. aphanidermatum was 84% and 80% lower than in the controls and AUDPC values were reduced by 66% and 57%; these strains did not suppress P. dissotocum. Burkholderia gladioli C-2-74 and C.
    [Show full text]
  • Rice Diseases and Disorders in Louisiana D E
    Louisiana State University LSU Digital Commons LSU Agricultural Experiment Station Reports LSU AgCenter 1991 Rice diseases and disorders in Louisiana D E. Groth Follow this and additional works at: http://digitalcommons.lsu.edu/agexp Recommended Citation Groth, D E., "Rice diseases and disorders in Louisiana" (1991). LSU Agricultural Experiment Station Reports. 668. http://digitalcommons.lsu.edu/agexp/668 This Article is brought to you for free and open access by the LSU AgCenter at LSU Digital Commons. It has been accepted for inclusion in LSU Agricultural Experiment Station Reports by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. Bulletin No. 828 July 1991 Rice Diseases and Disorders in Louisiana D. E. Groth, M. C .. Rush, and C.A. Hollier MIDL s 6 7 E36 n o .828 1 9 91 July Contents Page Acknowledgments...... ..... .. ..... ........................... .. ...... ................................... 3 Introduction ................... .................................................... ... .. ...................... 5 Rice Disease Identification . .. ....... ....... ...... ...... ...... ...... ...... ..... ..... ....... ...... 6 Guide to Identifying Rice Diseases Present in Louisiana.... .. .. .................. 7 Rice Diseases in Louisiana . ..... ....... ..... ....... .... .. ... ...... ....... ... .. .... ....... .... 11 Bacterial Leaf Blight ............................................................................ 11 Black Kernel............................ ... .. ... .....................................................
    [Show full text]
  • ABSTRACT REEVES, ELLA ROBYN. Pythium Spp. Associated with Root
    ABSTRACT REEVES, ELLA ROBYN. Pythium spp. Associated with Root Rot and Stunting of Winter Field and Cover Crops in North Carolina. (Under the direction of Dr. Barbara Shew and Dr. Jim Kerns). Soft red winter wheat (Triticum aestivum) was valued at over $66 million in North Carolina in 2019, but mild to severe stunting and root rot limit yields in the Coastal Plain region during years with above-average rainfall. Pythium irregulare, P. vanterpoolii, and P. spinosum were previously identified as causal agents of stunting and root rot of winter wheat in this region. Annual double-crop rotation systems that incorporate winter wheat, or other winter crops such as clary sage, rapeseed, or a cover crop are common in the Coastal Plain of North Carolina. Stunting and root rot reduce yields of clary sage, and limit stand establishment and biomass accumulation of other winter crops in wet soils, but the role that Pythium spp. play in root rot of these crops is not understood, To investigate species prevalence, isolates of Pythium were collected from stunted winter wheat, clary sage, rye, rapeseed, and winter pea plants collected in eastern North Carolina during the growing season of 2018-2019, and from all crops except winter wheat again in 2019-2020. A total of 534 isolates were identified from all hosts. P. irregulare (32%), P. vanterpoolii (17%), and P. spinosum (16%) were the species most frequently recovered from wheat. P. irregulare (37% of all isolates) and members of the species complex Pythium sp. cluster B2A (28% of all isolates) comprised the majority of isolates collected from clary sage, rye, rapeseed, and winter pea.
    [Show full text]
  • The Pennsylvania State University
    The Pennsylvania State University The Graduate School Department of Plant Pathology and Environmental Microbiology CHARACTERIZATION OF Pythium and Phytopythium SPECIES FREQUENTLY FOUND IN IRRIGATION WATER A Thesis in Plant Pathology by Carla E. Lanze © 2015 Carla E. Lanze Submitted in Partial Fulfillment of the Requirement for the Degree of Master of Science August 2015 ii The thesis of Carla E. Lanze was reviewed and approved* by the following Gary W. Moorman Professor of Plant Pathology Thesis Advisor David M. Geiser Professor of Plant Pathology Interim Head of the Department of Plant Pathology and Environmental Microbiology Beth K. Gugino Associate Professor of Plant Pathology Todd C. LaJeunesse Associate Professor of Biology *Signatures are on file in the Graduate School iii ABSTRACT Some Pythium and Phytopythium species are problematic greenhouse crop pathogens. This project aimed to determine if pathogenic Pythium species are harbored in greenhouse recycled irrigation water tanks and to determine the ecology of the Pythium species found in these tanks. In previous research, an extensive water survey was performed on the recycled irrigation water tanks of two commercial greenhouses in Pennsylvania that experience frequent poinsettia crop loss due to Pythium aphanidermatum. In that work, only a preliminary identification of the baited species was made. Here, detailed analyses of the isolates were conducted. The Pythium and Phytopythium species recovered during the survey by baiting the water were identified and assessed for pathogenicity in lab and greenhouse experiments. The Pythium species found during the tank surveys were: a species genetically very similar to P. sp. nov. OOMYA1702-08 in Clade B2, two distinct species of unknown identity in Clade E2, P.
    [Show full text]
  • Pathogens and Molds Affecting Production and Quality of Cannabis Sativa L
    ORIGINAL RESEARCH published: 17 October 2019 doi: 10.3389/fpls.2019.01120 Pathogens and Molds Affecting Production and Quality of Cannabis sativa L. Zamir K. Punja*, Danielle Collyer, Cameron Scott, Samantha Lung, Janesse Holmes and Darren Sutton Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada Plant pathogens infecting marijuana (Cannabis sativa L.) plants reduce growth of the crop by affecting the roots, crown, and foliage. In addition, fungi (molds) that colonize the inflorescences (buds) during development or after harvest, and which colonize internal tissues as endophytes, can reduce product quality. The pathogens and molds that affect C. sativa grown hydroponically indoors (in environmentally controlled growth rooms and greenhouses) and field-grown plants were studied over multiple years of sampling. A PCR- based assay using primers for the internal transcribed spacer region (ITS) of ribosomal DNA confirmed identity of the cultures. Root-infecting pathogens includedFusarium oxysporum, Fusarium solani, Fusarium brachygibbosum, Pythium dissotocum, Pythium Edited by: myriotylum, and Pythium aphanidermatum, which caused root browning, discoloration of Donald Lawrence Smith, the crown and pith tissues, stunting and yellowing of plants, and in some instances, plant McGill University, Canada death. On the foliage, powdery mildew, caused by Golovinomyces cichoracearum, was the Reviewed by: David L. Joly, major pathogen observed. On inflorescences,Penicillium bud rot (caused by Penicillium Université de Moncton, olsonii and Penicillium copticola), Botrytis bud rot (Botrytis cinerea), and Fusarium bud Canada Benedetta Mattei, rot (F. solani, F. oxysporum) were present to varying extents. Endophytic fungi present University of L’Aquila, Italy in crown, stem, and petiole tissues included soil-colonizing and cellulolytic fungi, such *Correspondence: as species of Chaetomium, Trametes, Trichoderma, Penicillium, and Fusarium.
    [Show full text]
  • Ecology and Management of Pythium Species in Float Greenhouse Tobacco Transplant Production
    Ecology and Management of Pythium species in Float Greenhouse Tobacco Transplant Production Xuemei Zhang Dissertation submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Plant Pathology, Physiology and Weed Science Charles S. Johnson, Chair Anton Baudoin Chuanxue Hong T. David Reed December 17, 2020 Blacksburg, Virginia Keywords: Pythium, diversity, distribution, interactions, virulence, growth stages, disease management, tobacco seedlings, hydroponic, float-bed greenhouses Copyright © 2020, Xuemei Zhang Ecology and Management of Pythium species in Float Greenhouse Tobacco Transplant Production Xuemei Zhang ABSTRACT Pythium diseases are common in the greenhouse production of tobacco transplants and can cause up to 70% seedling loss in hydroponic (float-bed) greenhouses. However, the symptoms and consequences of Pythium diseases are often variable among these greenhouses. A tobacco transplant greenhouse survey was conducted in 2017 in order to investigate the sources of this variability, especially the composition and distribution of Pythium communities within greenhouses. The survey revealed twelve Pythium species. Approximately 80% of the surveyed greenhouses harbored Pythium in at least one of four sites within the greenhouse, including the center walkway, weeds, but especially bay water and tobacco seedlings. Pythium dissotocum, followed by P. myriotylum, were the most common species. Pythium myriotylum, P. coloratum, and P. dissotocum were aggressive pathogens that suppressed seed germination and caused root rot, stunting, foliar chlorosis, and death of tobacco seedlings. Pythium aristosporum, P. porphyrae, P. torulosum, P. inflatum, P. irregulare, P. catenulatum, and a different isolate of P. dissotocum, were weak pathogens, causing root symptoms without affecting the upper part of tobacco seedlings.
    [Show full text]
  • Considering Cannabis
    October 2015 CONTROLLED ENVIRONMENT AGRICULTURE Consi dering Canna bis THE SCIENCE AND PRACTICALITY OF GROWING CEA’S TRENDIEST CROP. WILL YOU BE CAUGHT UP IN THE “GREEN RUSH” ? Page 10 PAGE 16 PAGE 24 PAGE 26 FIELD-GROWN FROM FOOTBALL GROWING LETTUCE Which TO FARMING A ORGANIC? These ones work in young man's journey are the best fertilizers hydroponic systems? into hydroponics 1 Reader Service Number 200 Reader Service Number 201 From Your Editor first time we’ve broken from the mold and pushed the boundaries of the traditional hor - ticulture industry. In June 2011, GrowerTalks was the first trade publication in our industry to openly discuss cannabis—a feature story Managing Editor Jennifer Zurko won a presti - gious national award for. Four years later, cannabis cultivation is more widespread and the topic is less likely to ruffle as many feathers—we think. Not knowing exactly where this story would take me, I set out with simply an open mind and a curiosity to explore the cannabis industry objectively and try to answer some questions I thought my readers would be cu - rious about. Naturally, I began my journey to learn Since sending out the first more about the industry in Burlington, Ver - mont, the place I call home. Vermont has a issue of Inside Grower four years ago, we’ve small, but tightly regulated, medical cannabis maintained a focus on the cultivation of edible program and it’s possible the state legislature will legalize the recreational use of mari - crops in controlled environments—and we’ll juana in 2016.
    [Show full text]
  • Biological Control of Soil-Borne Pathogens by Fluorescent Pseudomonads
    Nature Reviews Microbiology | AOP,published online 10 March 2005; doi:10.1038/nrmicro1129 REVIEWS BIOLOGICAL CONTROL OF SOIL-BORNE PATHOGENS BY FLUORESCENT PSEUDOMONADS Dieter Haas* and Geneviève Défago‡ Abstract | Particular bacterial strains in certain natural environments prevent infectious diseases of plant roots. How these bacteria achieve this protection from pathogenic fungi has been analysed in detail in biocontrol strains of fluorescent pseudomonads. During root colonization, these bacteria produce antifungal antibiotics, elicit induced systemic resistance in the host plant or interfere specifically with fungal pathogenicity factors. Before engaging in these activities, biocontrol bacteria go through several regulatory processes at the transcriptional and post-transcriptional levels. SUPPRESSIVE SOIL Imagine a place on Earth where an organism does not results from the activities of soil microorganisms that A soil in which plants do not suffer from infectious disease and is unlikely to become act as pathogen antagonists. There is evidence that each suffer from certain diseases or infected even though pathogens might be present. of the pathogens described in BOX 1 can be held in check where disease severity is Such exceptional places exist and are known as natural by antagonistic microorganisms in suppressive soils3,9. reduced, although a pathogen 1–3 might be present, and the host SUPPRESSIVE SOILS .They occur, for instance, in the Salinas Note,however, that the suppressiveness of some soils is plant is susceptible to the Valley (California, United States), the Chateaurenard not transferable; for a discussion of this observation, the disease; the opposite of a region near Cavaillon (France), the Canary Islands and reader is referred to specialized reviews2,3.Third,when conducive soil.
    [Show full text]
  • Microbial Suppression of Pythium Root Rot in Soilless Systems
    Microbial Suppression of Pythium Root Rot in Soilless Systems Cora McGehee B.S. Louisiana State University, 2015 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science At the University of Connecticut 2018 Copyright by Cora Shields McGehee 2018 ii APPROVAL PAGE Master Thesis Microbial Suppression of Pythium Root Rot in Soilless Systems Presented by Cora Shields McGehee, B.S. Major Advisor_________________________________________________________________ Rosa E. Raudales Associate Advisor______________________________________________________________ Wade H. Elmer Associate Advisor_______________________________________________________________ Richard J. McAvoy University of Connecticut 2018 iii Acknowledgements I am beyond grateful to my major advisor Dr. Rosa Raudales for her hard work and dedication to the lab and innovative research projects. Her guidance and patience has made me into a stronger researcher and diligent worker. I also want to thank the other members of my committee Dr. Wade Elmer and Dr. Richard McAvoy for their time and generous advice. I want to thank Frederick Pettit, Shelley Durocher, and Ronald Brine for their assistance in the various greenhouse projects conducted. Thank you Margery Daughtrey for supplying isolates for experiments. Special thanks to Juan Cabrera, Sohan Aziz, Steve Olenski, Joy Tosakoon, and Carla Caballero for giving your time to help with experiments. Lastly a thank you to the office staff, Christine Strand and Nicole Gabelman for their assistance and kindness. Special thanks to the U.S. Department of Agriculture via the Connecticut Department of Agriculture Specialty Crop Block Grant # AG151260 for its support and funding of this work. Thank you to friends and family who supported me over the phone during this intense intellectual pursuit.
    [Show full text]
  • An Annotated List of Genus Pythium from India
    Plant Pathology & Quarantine 10(1): 120–132 (2020) ISSN 2229-2217 www.ppqjournal.org Article Doi 10.5943/ppq/10/1/14 An annotated list of genus Pythium from India Dubey MK1,2*, Yadav M1 and Upadhyay RS1 1Laboratory of Mycopathology and Microbial Technology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi - 221005, Uttar Pradesh, India 2Department of Life Sciences, School of Basic & Applied Sciences, Galgotias University, Greater Noida- 203201, Uttar Pradesh, India Dubey MK, Yadav M, Upadhyay RS 2020 – An annotated list of genus Pythium from India. Plant Pathology & Quarantine 10(1), 120–132, Doi 10.5943/PPQ/10/1/14 Abstract Up-to-date information is presented based on an intensive search of literature records on the identity, occurrence, nomenclature, substratum, host ranges, geographical distribution and literature references of the genus Pythium from India. All Pythium species published until 2020 are included in this list. The survey result of all forms of analyses revealed that India has 55 species of Pythium belonging to the phylum Oomycota indicating the presence of rich mycoflora. Distribution of these Pythium species reported so far from freshwater and terrestrial habitats of various Indian states are listed alphabetically. The most frequently collected species are Pythium aphanidermatum, P. spinosum, and P. ultimum. The majority of these species were found as a parasite on a wide range of plants in both freshwater and terrestrial environment. Overall, this systematic checklist provides the total count of Pythium species, currently known to occur in India and it is also a valued addition for comparing Pythium diversity in India as well as the world.
    [Show full text]