Ostorhinchus: Apogonidae) from the Solomon Islands
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Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School November 2017 Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E. Hepner University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, Ecology and Evolutionary Biology Commons, and the Other Oceanography and Atmospheric Sciences and Meteorology Commons Scholar Commons Citation Hepner, Megan E., "Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary" (2017). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/7408 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary by Megan E. Hepner A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Marine Science with a concentration in Marine Resource Assessment College of Marine Science University of South Florida Major Professor: Frank Muller-Karger, Ph.D. Christopher Stallings, Ph.D. Steve Gittings, Ph.D. Date of Approval: October 31st, 2017 Keywords: Species richness, biodiversity, functional diversity, species traits Copyright © 2017, Megan E. Hepner ACKNOWLEDGMENTS I am indebted to my major advisor, Dr. Frank Muller-Karger, who provided opportunities for me to strengthen my skills as a researcher on research cruises, dive surveys, and in the laboratory, and as a communicator through oral and presentations at conferences, and for encouraging my participation as a full team member in various meetings of the Marine Biodiversity Observation Network (MBON) and other science meetings. -
Phylogeny of the Damselfishes (Pomacentridae) and Patterns of Asymmetrical Diversification in Body Size and Feeding Ecology
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.07.430149; this version posted February 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Phylogeny of the damselfishes (Pomacentridae) and patterns of asymmetrical diversification in body size and feeding ecology Charlene L. McCord a, W. James Cooper b, Chloe M. Nash c, d & Mark W. Westneat c, d a California State University Dominguez Hills, College of Natural and Behavioral Sciences, 1000 E. Victoria Street, Carson, CA 90747 b Western Washington University, Department of Biology and Program in Marine and Coastal Science, 516 High Street, Bellingham, WA 98225 c University of Chicago, Department of Organismal Biology and Anatomy, and Committee on Evolutionary Biology, 1027 E. 57th St, Chicago IL, 60637, USA d Field Museum of Natural History, Division of Fishes, 1400 S. Lake Shore Dr., Chicago, IL 60605 Corresponding author: Mark W. Westneat [email protected] Journal: PLoS One Keywords: Pomacentridae, phylogenetics, body size, diversification, evolution, ecotype Abstract The damselfishes (family Pomacentridae) inhabit near-shore communities in tropical and temperature oceans as one of the major lineages with ecological and economic importance for coral reef fish assemblages. Our understanding of their evolutionary ecology, morphology and function has often been advanced by increasingly detailed and accurate molecular phylogenies. Here we present the next stage of multi-locus, molecular phylogenetics for the group based on analysis of 12 nuclear and mitochondrial gene sequences from 330 of the 422 damselfish species. -
Fish Assemblage Structure Comparison Between Freshwater and Estuarine Habitats in the Lower Nakdong River, South Korea
Journal of Marine Science and Engineering Article Fish Assemblage Structure Comparison between Freshwater and Estuarine Habitats in the Lower Nakdong River, South Korea Joo Myun Park 1,* , Ralf Riedel 2, Hyun Hee Ju 3 and Hee Chan Choi 4 1 Dokdo Research Center, East Sea Research Institute, Korea Institute of Ocean Science and Technology, Uljin 36315, Korea 2 S&R Consultancy, Ocean Springs, MS 39564, USA; [email protected] 3 Ocean Policy Institute, Korea Institute of Ocean Science and Technology, Busan 49111, Korea; [email protected] 4 Fisheries Resources and Environment Division, East Sea Fisheries Research Institute, National Institute of Fisheries Science, Gangneung 25435, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-54-780-5344 Received: 6 June 2020; Accepted: 3 July 2020; Published: 5 July 2020 Abstract: Variabilities of biological communities in lower reaches of urban river systems are highly influenced by artificial constructions, alterations of flow regimes and episodic weather events. Impacts of estuary weirs on fish assemblages are particularly distinct because the weirs are disturbed in linking between freshwater and estuarine fish communities, and migration successes for regional fish fauna. This study conducted fish sampling at the lower reaches of the Nakdong River to assess spatio-temporal variations in fish assemblages, and effects of estuary weir on structuring fish assemblage between freshwater and estuary habitats. In total, 20,386 specimens comprising 78 species and 41 families were collected. The numerical dominant fish species were Tachysurus nitidus (48.8% in total abundance), Hemibarbus labeo (10.7%) and Chanodichthys erythropterus (3.6%) in the freshwater region, and Engraulis japonicus (10.0%), Nuchequula nuchalis (7.7%) and Clupea pallasii (5.2%) in the estuarine site. -
Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes
Old Dominion University ODU Digital Commons Biological Sciences Theses & Dissertations Biological Sciences Summer 2016 Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes Christi Linardich Old Dominion University, [email protected] Follow this and additional works at: https://digitalcommons.odu.edu/biology_etds Part of the Biodiversity Commons, Biology Commons, Environmental Health and Protection Commons, and the Marine Biology Commons Recommended Citation Linardich, Christi. "Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes" (2016). Master of Science (MS), Thesis, Biological Sciences, Old Dominion University, DOI: 10.25777/hydh-jp82 https://digitalcommons.odu.edu/biology_etds/13 This Thesis is brought to you for free and open access by the Biological Sciences at ODU Digital Commons. It has been accepted for inclusion in Biological Sciences Theses & Dissertations by an authorized administrator of ODU Digital Commons. For more information, please contact [email protected]. HOTSPOTS, EXTINCTION RISK AND CONSERVATION PRIORITIES OF GREATER CARIBBEAN AND GULF OF MEXICO MARINE BONY SHOREFISHES by Christi Linardich B.A. December 2006, Florida Gulf Coast University A Thesis Submitted to the Faculty of Old Dominion University in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE BIOLOGY OLD DOMINION UNIVERSITY August 2016 Approved by: Kent E. Carpenter (Advisor) Beth Polidoro (Member) Holly Gaff (Member) ABSTRACT HOTSPOTS, EXTINCTION RISK AND CONSERVATION PRIORITIES OF GREATER CARIBBEAN AND GULF OF MEXICO MARINE BONY SHOREFISHES Christi Linardich Old Dominion University, 2016 Advisor: Dr. Kent E. Carpenter Understanding the status of species is important for allocation of resources to redress biodiversity loss. -
DNA Barcoding on Cardinalfishes (Apogonidae) of Thoothukudi Coast
Int.J.Curr.Microbiol.App.Sci (2019) 8(8): 1293-1306 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 8 Number 08 (2019) Journal homepage: http://www.ijcmas.com Original Research Article https://doi.org/10.20546/ijcmas.2019.808.153 DNA Barcoding on Cardinalfishes (Apogonidae) of Thoothukudi Coast R. Rajeshkannan1*, J. Jaculine Pereira2, K. Karal Marx3, P. Jawahar2, D. Kiruthiga Lakshmi2 and Devivaraprasad Reddy4 1Dr. M.G.R. Fisheries College and Research Institute, Ponneri – 601204, India 2Fisheries College and Research Institute, Thoothukudi – 628008, India 3Institute of Fisheries Post Graduate Studies, OMR Campus, Vanniyanchavadi–603103, India 4Fisheries, Y.S.R. Horticulture University, Andhra Pradesh, India *Corresponding author ABSTRACT Cardinalfishes belongs to the family, Apogonidae is cryptic in nature that often shows taxonomic ambiguity through conventional taxonomy. It is globally accepted that mitochondrial DNA marker i.e., Cytochrome C Oxidase (COI) can be used to resolve these taxonomic uncertainties. In the present study, the DNA barcode was developed using COI K e yw or ds marker for the two species of cardinalfishes (Archamia bleekeri and Ostorhinchus fleurieu) Apogonids, DNA collected from Thoothukudi coast. Results showed that the distance values between the barcoding, two species are higher than that of within the species. The Cytochrome C Oxidase subunit Cardinalfishes, Gulf of I (COI) gene showed more number of transitional pairs (Si) than transversional pairs (Sv) Mannar, Tuticorin, Conservation with a ratio of 2.4. The average distance values between A. bleekeri and O. fleurieu were 3.825, 4.704, 5.145, 7.390, 8.148, 7.187 and distance values among the A. -
APOGONIDAE Cardinalfishes by G.R
click for previous page 2602 Bony Fishes APOGONIDAE Cardinalfishes by G.R. Allen iagnostic characters: Small (to 20 cm, usually under 12 cm) percoid fishes; body ovate to elongate, Dmoderately compressed. Eyes large, their diameter exceeding snout length. Rear margin of cheek (preopercle) with characteristic double edge, which is variously serrated or smooth. Mouth large, lower jaw often protruding. Jaws with bands of small villiform teeth; teeth present on vomer, but palatine teeth may be absent; enlarged canines on premaxillae, dentaries, or vomer in some species. Two separate dorsal fins, the first consisting of VI to VIII rigid spines, the second with I rigid spine and 8 to 14 soft rays. Anal fin with II rigid spines and 8 to 18 soft rays. Caudal fin rounded to forked, frequently emarginate or truncate. Pelvic fins with I spine and 5 soft rays. Pectoral fins with 10 to 20 rays. Branchiostegal rays 7. Scales relatively large in marine species, except absent in Gymnapogon;scales usually ctenoid, but cycloid in a few species, about 9 to 37 lateral-line scales in most marine species, but absent in at least 1 species of Siphamia. Colour: highly variable, frequently shades of black, brown, red, or yellow; many species exhibit a pattern of dark bars or stripes on a lighter ground colour. 2 dorsal fins Apogon double-edged preopercle II anal-fin Pterapogon spines Rhabdamia Habitat, biology, and fisheries: Inhabit coral and rocky reefs and adjacent habitats including sand-rubble patches and seagrass beds; several species frequently shelter among the spines of sea urchins (usually Diadema) or Crown-of-thorns starfish (Acanthaster). -
Black Gut Phenomenon in Cardinal Fishes (Apogonidae, Teleostei)
MARINE ECOLOGY PROGRESS SERIES Published December 31 Mar Ecol Prog Ser NOTE Black gut phenomenon in cardinal fishes (Apogonidae,Teleostei) 'Dept of Zoolog)!, George S. Wise Faculty of Life Sciences, Tel-Aviv University, Ramat Aviv. 69978 Israel *J.L.B. Smith Institute of Ichthyology, PB 1015, Grahamstown 6140, South Africa ABSTRACT: A study of 78 species of cardinal fishes (Apoyo- cardinal fish. Lachneratus phasmaticus, mention its nidae) revealed that 22 of them had black guts, 5 species had 'blackish alimentary canal' as an identifying character. partly black guts and, in 51 species, the digestive tube was To study the distribution of this phenomenon in car- unpigmented or had dispersed melanophores in the external tunic. The black plgrnentation is caused by melanization of dinal fishes (Apogonidae),we investigated 78 species the submucosal connective tissue which is s~tuatedbetween of this family. the musculans and the basal lamina of the Internal epithe- Methods. The material for this study included cardi- lium. This phenomenon was previously observed in moray nal fishes preserved in collections of the Department of eels and some pelag~cfish. In nocturnal predators, it appears Zoology, Tel-Aviv University, Israel, as well as in the to serve to conceal bioluminescent prey in the stomach cavity. collection of the J.L.B.Smith Institute of Ichthyology, KEY WORDS: Apogonids - Melanization of guts Grahamstown, South Africa. In addition, 18 species of live cardinal fishes were collected in the vicinity of Eilat, Gulf of Aqaba. For daytime collection we used quinaldin anesthetic, which we sprayed into the rock The occurrence of highly pigmented tissue in the crevices used as hideouts by these fishes while, at abdominal cavity is one of the specific morphological night, underwater lights and hand nets were used. -
Materials and Methods
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Woods Hole Open Access Server 1 2 3 Planktonic Larval Duration, Age and Growth of Ostorhinchus doederleini (Pisces: Apogonidae) on 4 the Southern Great Barrier Reef, Australia 5 6 M.J. Kingsford1* 7 M.D. Finn1† 8 M.D. O’Callaghan1 9 J. Atema2 10 G. Gerlach3 11 1 ARC Centre of Excellence for Coral Reef Studies, School of Marine and Tropical Biology, James 12 Cook University, Townsville, QLD, Australia 4811 13 14 2 University of Boston, and Woodshole Oceanographic Institute 15 3Carl von Ossietzky University of Oldenburg Carl von Ossietzky Str. 9-11, 26111 Oldenburg, Germany 16 *Corresponding Author. 17 Phone: +61 7 4781 4345 18 FAX: +61 7 4781 5511 19 E-mail: [email protected] 20 †Current address: School of Marine and Tropical Biology, James Cook University, Townsville, Qld 21 4811 Australia 22 Keywords: Apogonidae, otoliths, age, PLD, settlement, growth, mortality. 23 24 1 25 26 Abstract 27 Cardinalfishes (Apogonidae) are abundant on corals reefs, but there are few data on demography to 28 understand trophodynamics and population dynamics. Ostorhinchus doederleini is a small and abundant 29 apogonid on the Great Barrier Reef (GBR) and throughout the Western Pacific Ocean. We present key 30 demographic parameters for the entire life history from the southern GBR. Daily deposition of 31 increments in otoliths was validated. Fish had a Planktonic Larval Duration (PLD) of 16 to 26 days. 32 PLD was established from fish collected immediately prior to settlement as no settlement mark was 33 found. -
A Rare Occurrence of Matched Otoliths And
A RARE OCCURRENCE OF MATCHED OTOLITHS AND ASSOCIATED SKELETAL REMAINS OF APOGON TOWNSENDI (OSTEICHTHYES) FROM THE CALOOSAHATCHEE FORMATION (LOWER PLEISTOCENE) OF FLORIDA Gary L. Stringer1, Richard C. Hulbert Jr.2, Dirk Nolf3, Paul Roth4, and Roger W. Portell4 ABSTRACT A matched pair of otoliths (right and left saccular otoliths) and associated skeletal remains (n = 107) of Apogon townsendi (belted cardinalfish) were obtained in unconsolidated sediment from inside the valves of an articulated scallop Carolinapecten eboreus. The scallop specimen was collected in Hendry County, Florida, from the lower Pleistocene Caloosahatchee Formation, approximately 1.7 to 2.1 Ma. The recov- ery of this vertebrate material is highly significant because no skeletal remains of bony fish with in situ or associated otoliths are known from the Gulf or Atlantic coasts of the United States. Furthermore, the specimen represents the first fossil record of the family Apogonidae and the genus Apogon from Florida and the first report of the species Apogon townsendi in the fossil record. The length of the fossil Apogon townsendi was determined to be 4.7 cm based on the linear relationship between fish length and otolith length and utilizing modern specimens of the species for comparison and analysis. The length of the fossil Apogon townsendi indicated that it was an adult fish upon death (> 2.1 cm). Although several taphonomic scenarios are considered, including commensalism, it is believed that the apogonid died in close proximity to the empty scallop shell, which was followed by fairly rapid washing in of sediment with the fish into the valves of the scallop (i.e., sediment trapping). -
(Percomorpha: Apogonidae) Based on Molecular Analyses and Comparative Reevaluation of Morphological Characters
Zootaxa 3846 (2): 151–203 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3846.2.1 http://zoobank.org/urn:lsid:zoobank.org:pub:3844E8F1-A20C-44B4-9B47-B170F5A7C0C2 Revision of the systematics of the cardinalfishes (Percomorpha: Apogonidae) based on molecular analyses and comparative reevaluation of morphological characters KOHJI MABUCHI1, THOMAS H. FRASER2,3, HAYEUN SONG1, YOICHIRO AZUMA1 & MUTSUMI NISHIDA1,4 1Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8564, Japan. E-mail: [email protected] 2Florida Museum of Natural History, University of Florida, Dickinson Hall, Museum Road, Gainesville, Florida, 32611, United States 3Mote Marine Laboratory, 1600 Ken Thompson Parkway, Sarasota, Florida 34236, United States. E-mail: [email protected] 4University of the Ryukyus, 1 Senbaru, Nishihara-cho, Okinawa 903-0213, Japan Table of contents Abstract . 152 Introduction . 152 Material and methods . 155 Results . 163 Discussion . 171 Family, subfamily and tribal morphological diagnoses, general distribution and remarks . 173 1. FAMILY . 173 Family Apogonidae Günther 1859 . 173 2. SUBFAMILIES . 174 Key to the subfamilies of Apogonidae . 174 Amioidinae new subfamily Fraser & Mabuchi . 175 Subfamily Apogoninae Günther 1859 . 175 Paxtoninae new subfamily Fraser & Mabuchi . 176 Subfamily Pseudamiinae Smith 1954 . 177 3. APOGONINAE TRIBES ALL NEW . 178 Tribe Apogonichthyini Snodgrass & Heller 1905 . 178 Tribe Apogonini Günther 1859 . 178 Tribe Archamiini new name Fraser & Mabuchi . 179 Tribe Cheilodipterini Bleeker 1856 . 180 Tribe Glossamiini new name Fraser & Mabuchi . 180 Tribe Gymnapogonini Whitley 1941 . 181 Tribe Lepidamiini new name Fraser & Mabuchi . -
Re-Description of Two Species of the Cardinalfish Genus Archamia (Teleostei: Apogonidae) from the Red Sea and Western Indian Ocean
Zootaxa 3608 (7): 587–594 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2013 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3608.7.5 http://zoobank.org/urn:lsid:zoobank.org:pub:C40DAA3A-CD4B-4974-B06E-8BF321A80FA2 Re-description of two species of the cardinalfish genus Archamia (Teleostei: Apogonidae) from the Red Sea and Western Indian Ocean OFER GON1, GAVIN GOUWS1, JAMES MWALUMA2 & MONICA MWALE1 1South African Institute for Aquatic Biodiversity, Private Bag 1015, Grahamstown 6140, South Africa. Email: [email protected], [email protected], [email protected] 2Kenya Marine Fisheries Research Institute, Mombasa, Kenya. Email: [email protected] Abstract The cardinalfishes Archamia bilineata and A. pallida were originally described from a small number of specimens collected in the Gulf of Aqaba, Red Sea and Oman, respectively. Both species are re-described using specimens collected recently in Yemen and Kenya, including the first known adult of A. pallida. These new collections increased the geographical range of both species considerably. Differences between the two populations now known for each of the species are discussed. Key words: Archamia bilineata, Archamia pallida, Archamia mozambiquensis, fish taxonomy, Kenya, Yemen Introduction The Western Indian Ocean (WIO) has eight species belonging to the cardinalfish genus Archamia (Gon & Randall 2003a). Archamia fucata (Cantor), an Indo-West Pacific species, is widespread throughout the WIO and farther eastward. Archamia lineolata (Cuvier), initially thought to be distributed in the Red Sea and along the east coast of Africa, is a Red Sea endemic, while its east African specimens were described by Gon and Randall (2003a) as a new species, A. -
Apogonichthyoides Taeniatus (Cuvier, 1828)
Apogonichthyoides taeniatus (Cuvier, 1828) Item Type other Authors Ketabi, Ramin; Jamili, Shahla Publisher Kish International Campus, Tehran University Download date 29/09/2021 17:46:24 Link to Item http://hdl.handle.net/1834/36048 Apogonichthyoides taeniatus (Cuvier, 1828) Kingdom: Animalia Phylum: Chordata Family: Apogonidae Class: Actinopterygii Genus: Apogonichthyoides Order: Perciformes Species: A. taeniatus Apogonichthyoides taeniatus also known as Twobelt cardinal and striped cardinalfish, this species was named: Apogon taeniatus and Apagon bifasciatus, but Apogonichthyoides taeniatus accepted now. It is a marine fish of subtropical climate and associated coastal reefs and mangroves. A. taeniatus is an extremely cryptic species .It is virtually never seen during the day .A. taeniatus also appears to be a very shallow water species. A. taeniatus is found in seagrass beds or areas with heavy algal growth .A. taeniatus is easily confused with A. pseudotaeniatus, which has a similar color pattern. Photo By: Ramin Ketabi, Tehran Univ. Kish Inter. Camp., Iran A. taeniatus inhabits coastal shallow silty and mangrove areas and Editor:Shahla Jamili, Iran Fish. Sci. Res. Inst. (AREOO), Iran usually found at depths between 5–20 m. It can grow up to 5 cm maximum. We report for the first time from Iranian Waters )Persian Gulf, Kish Island), we found it at depth from 3 m, and Maximum length is 4 cm in Kish Island (Iranian Waters). Males incubate eggs in buccal cavity. Embryos do not feed externally in the buccal cavity. Distinct pairing during courtship and spawning. Internal fertilization and paternal care by mouth brooding is found to be a rare combination of reproductive strategy.