Functional Roles of the Interaction of APP and Lipoprotein Receptors
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Imm Catalog.Pdf
$ Gene Symbol A B 3 C 4 D 9 E 10 F 11 G 12 H 13 I 14 J. K 17 L 18 M 19 N 20 O. P 22 R 26 S 27 T 30 U 32 V. W. X. Y. Z 33 A ® ® Gene Symbol Gene ID Antibody Monoclonal Antibody Polyclonal MaxPab Full-length Protein Partial-length Protein Antibody Pair KIt siRNA/Chimera Gene Symbol Gene ID Antibody Monoclonal Antibody Polyclonal MaxPab Full-length Protein Partial-length Protein Antibody Pair KIt siRNA/Chimera A1CF 29974 ● ● ADAMTS13 11093 ● ● ● ● ● A2M 2 ● ● ● ● ● ● ADAMTS20 80070 ● AACS 65985 ● ● ● ADAMTS5 11096 ● ● ● AANAT 15 ● ● ADAMTS8 11095 ● ● ● ● AATF 26574 ● ● ● ● ● ADAMTSL2 9719 ● AATK 9625 ● ● ● ● ADAMTSL4 54507 ● ● ABCA1 19 ● ● ● ● ● ADAR 103 ● ● ABCA5 23461 ● ● ADARB1 104 ● ● ● ● ABCA7 10347 ● ADARB2 105 ● ABCB9 23457 ● ● ● ● ● ADAT1 23536 ● ● ABCC4 10257 ● ● ● ● ADAT2 134637 ● ● ABCC5 10057 ● ● ● ● ● ADAT3 113179 ● ● ● ABCC8 6833 ● ● ● ● ADCY10 55811 ● ● ABCD2 225 ● ADD1 118 ● ● ● ● ● ● ABCD4 5826 ● ● ● ADD3 120 ● ● ● ABCG1 9619 ● ● ● ● ● ADH5 128 ● ● ● ● ● ● ABL1 25 ● ● ADIPOQ 9370 ● ● ● ● ● ABL2 27 ● ● ● ● ● ADK 132 ● ● ● ● ● ABO 28 ● ● ADM 133 ● ● ● ABP1 26 ● ● ● ● ● ADNP 23394 ● ● ● ● ABR 29 ● ● ● ● ● ADORA1 134 ● ● ACAA2 10449 ● ● ● ● ADORA2A 135 ● ● ● ● ● ● ● ACAN 176 ● ● ● ● ● ● ADORA2B 136 ● ● ACE 1636 ● ● ● ● ADRA1A 148 ● ● ● ● ACE2 59272 ● ● ADRA1B 147 ● ● ACER2 340485 ● ADRA2A 150 ● ● ACHE 43 ● ● ● ● ● ● ADRB1 153 ● ● ACIN1 22985 ● ● ● ADRB2 154 ● ● ● ● ● ACOX1 51 ● ● ● ● ● ADRB3 155 ● ● ● ● ACP5 54 ● ● ● ● ● ● ● ADRBK1 156 ● ● ● ● ACSF2 80221 ● ● ADRM1 11047 ● ● ● ● ACSF3 197322 ● ● AEBP1 165 ● ● ● ● ACSL4 2182 ● -
Datasheet Blank Template
SAN TA C RUZ BI OTEC HNOL OG Y, INC . LRP3 (E-13): sc-109956 BACKGROUND APPLICATIONS Members of the LDL receptor gene family, including LDLR (low density lipo- LRP3 (E-13) is recommended for detection of All LRP3 isoforms 1-3 of mouse, protein receptor), LRP1 (low density lipoprotein related protein), Megalin rat and human origin by Western Blotting (starting dilution 1:200, dilution (also designated GP330), VLDLR (very low density lipoprotein receptor) and range 1:100-1:1000), immunofluorescence (starting dilution 1:50, dilution ApoER2 are characterized by a cluster of cysteine-rich class A repeats, epi - range 1:50-1:500) and solid phase ELISA (starting dilution 1:30, dilution dermal growth factor (EGF)-like repeats, YWTD repeats and an O-linked sugar range 1:30-1:3000); non cross-reactive with other LRP family members. domain. Low-density lipoprotein receptor-related protein 3 (LRP3) is a 770 LRP3 (E-13) is also recommended for detection of All LRP3 isoforms 1-3 in amino acid protein that contains two CUB domains and four LDL-receptor additional species, including equine, canine, bovine and porcine. class A domains. LRP3 is widely expressed with highest expression in skele - tal muscle and ovary and lowest expression in testis, colon and leukocytes. Suitable for use as control antibody for LRP3 siRNA (h): sc-97441, LRP3 LRP3 is potentially a membrane receptor involved in the internalization of siRNA (m): sc-149048, LRP3 shRNA Plasmid (h): sc-97441-SH, LRP3 shRNA lipophilic molecules and/or signal transduction. Plasmid (m): sc-149048-SH, LRP3 shRNA (h) Lentiviral Particles: sc-97441-V and LRP3 shRNA (m) Lentiviral Particles: sc-149048-V. -
Supp Table 6.Pdf
Supplementary Table 6. Processes associated to the 2037 SCL candidate target genes ID Symbol Entrez Gene Name Process NM_178114 AMIGO2 adhesion molecule with Ig-like domain 2 adhesion NM_033474 ARVCF armadillo repeat gene deletes in velocardiofacial syndrome adhesion NM_027060 BTBD9 BTB (POZ) domain containing 9 adhesion NM_001039149 CD226 CD226 molecule adhesion NM_010581 CD47 CD47 molecule adhesion NM_023370 CDH23 cadherin-like 23 adhesion NM_207298 CERCAM cerebral endothelial cell adhesion molecule adhesion NM_021719 CLDN15 claudin 15 adhesion NM_009902 CLDN3 claudin 3 adhesion NM_008779 CNTN3 contactin 3 (plasmacytoma associated) adhesion NM_015734 COL5A1 collagen, type V, alpha 1 adhesion NM_007803 CTTN cortactin adhesion NM_009142 CX3CL1 chemokine (C-X3-C motif) ligand 1 adhesion NM_031174 DSCAM Down syndrome cell adhesion molecule adhesion NM_145158 EMILIN2 elastin microfibril interfacer 2 adhesion NM_001081286 FAT1 FAT tumor suppressor homolog 1 (Drosophila) adhesion NM_001080814 FAT3 FAT tumor suppressor homolog 3 (Drosophila) adhesion NM_153795 FERMT3 fermitin family homolog 3 (Drosophila) adhesion NM_010494 ICAM2 intercellular adhesion molecule 2 adhesion NM_023892 ICAM4 (includes EG:3386) intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)adhesion NM_001001979 MEGF10 multiple EGF-like-domains 10 adhesion NM_172522 MEGF11 multiple EGF-like-domains 11 adhesion NM_010739 MUC13 mucin 13, cell surface associated adhesion NM_013610 NINJ1 ninjurin 1 adhesion NM_016718 NINJ2 ninjurin 2 adhesion NM_172932 NLGN3 neuroligin -
Megalin, an Endocytotic Receptor with Signalling Potential
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Medicine 116 Megalin, an Endocytotic Receptor with Signalling Potential MÅRTEN LARSSON ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6206 UPPSALA ISBN 91-554-6483-1 2006 urn:nbn:se:uu:diva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o Dr. John Pemberton List of original papers This thesis is based on the following -
Microrna-4739 Regulates Osteogenic and Adipocytic Differentiation of Immortalized Human Bone Marrow Stromal Cells Via Targeting LRP3
Stem Cell Research 20 (2017) 94–104 Contents lists available at ScienceDirect Stem Cell Research journal homepage: www.elsevier.com/locate/scr MicroRNA-4739 regulates osteogenic and adipocytic differentiation of immortalized human bone marrow stromal cells via targeting LRP3 Mona Elsafadi a,c, Muthurangan Manikandan a, Nehad M Alajez a,RimiHamama, Raed Abu Dawud b, Abdullah Aldahmash a,d,ZafarIqbale,MusaadAlfayeza,MoustaphaKassema,c,AmerMahmooda,⁎ a Stem Cell Unit, Department of Anatomy, College of Medicine,King Saud University, Riyadh 11461, Saudi Arabia b Department of Comparative Medicine, King Faisal Specialist Hospital and Research Centre, Riyadh 12713, Saudi Arabia c KMEB, Department of Endocrinology, University Hospital of Odense, University of Southern Denmark, Winslowsparken 25.1, DK-5000 Odense C, Denmark d Prince Naif Health Research Center, King Saud University, Riyadh 11461, Saudi Arabia e Department of Basic Sciences, College of applied medical sciences, King Saud Bin Abdulaziz University for Health Sciences (KSAU-HS), National GuardHealthAffairs,AlAhsa,SaudiArabia article info abstract Article history: Understanding the regulatory networks underlying lineage differentiation and fate determination of human Received 7 September 2016 bone marrow stromal cells (hBMSC) is a prerequisite for their therapeutic use. The goal of the current study Received in revised form 25 February 2017 was to unravel the novel role of the low-density lipoprotein receptor-related protein 3 (LRP3) in regulating Accepted 1 March 2017 the osteogenic and adipogenic differentiation of immortalized hBMSCs. Gene expression profiling revealed sig- Available online 8 March 2017 nificantly higher LRP3 levels in the highly osteogenic hBMSC clone imCL1 than in the less osteogenic clone imCL2, as well as a significant upregulation of LRP3 during the osteogenic induction of the imCL1 clone. -
LRP11 (K-20): Sc-247828
SAN TA C RUZ BI OTEC HNOL OG Y, INC . LRP11 (K-20): sc-247828 BACKGROUND APPLICATIONS Members of the LDL receptor gene family, including LDLR (low density LRP11 (K-20) is recommended for detection of LRP11 of mouse and rat origin lipoprotein receptor), LRP1 (low density lipoprotein related protein), megalin by Western Blotting (starting dilution 1:200, dilution range 1:100-1:1000), (also designated GP330), VLDLR (very low density lipoprotein receptor) and immunoprecipitation [1-2 µg per 100-500 µg of total protein (1 ml of cell ApoER2 are characterized by a cluster of cysteine-rich class A repeats, lysate)], immunofluorescence (starting dilution 1:50, dilution range 1:50- epidermal growth factor (EGF)-like repeats, YWTD repeats and an O-linked 1:500) and solid phase ELISA (starting dilution 1:30, dilution range 1:30- sugar domain. LRP11 (low density lipoprotein receptor-related protein 11), 1:3000); non cross-reactive with other LRP family members. also known as MANSC3, is a 500 amino acid single-pass type I membrane Suitable for use as control antibody for LRP11 siRNA (m): sc-149044, LRP11 protein that exists as 2 alternatively spliced isoforms. LRP11 is encoded shRNA Plasmid (m): sc-149044-SH and LRP11 shRNA (m) Lentiviral Particles: by a gene located on human chromosome 6q25.1. Chromosome 6 contains sc-149044-V. 170 million base pairs and comprises nearly 6% of the human genome. Deletion of a portion of the q arm of chromosome 6 is associated with early Molecular Weight of LRP11 isoforms: 53/25 kDa. onset intestinal cancer, suggesting the presence of a cancer susceptibility Positive Controls: mouse brain extract: sc-2253 or mouse skin extract: locus. -
Insect Vitellogenin/Yolk Protein Receptors Thomas W
Entomology Publications Entomology 2005 Insect Vitellogenin/Yolk Protein Receptors Thomas W. Sappington U.S. Department of Agriculture, [email protected] Alexander S. Raikhel University of California, Riverside Follow this and additional works at: https://lib.dr.iastate.edu/ent_pubs Part of the Entomology Commons, and the Population Biology Commons The ompc lete bibliographic information for this item can be found at https://lib.dr.iastate.edu/ ent_pubs/483. For information on how to cite this item, please visit http://lib.dr.iastate.edu/ howtocite.html. This Book Chapter is brought to you for free and open access by the Entomology at Iowa State University Digital Repository. It has been accepted for inclusion in Entomology Publications by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Insect Vitellogenin/Yolk Protein Receptors Abstract The protein constituents of insect yolk are generally, if not always, synthesized outside the oocyte, often in the fat body and sometimes in the foilicular epithelium (reviewed in Telfer, 2002). These yolk protein precursors (YPP's) are internalized by the oocyte through receptor-mediated endocytosis (Roth et al., 1976; Telfer et al., 1982; Raikhel and Dhaclialla, 1992; Sappington and Rajkhel, 1995; Snigirevskaya et al., I 997a,b). A number of proteins have been identified as constituents of insect yolk (reviewed in Telfer, 2002), and some of their receptors have been identified. The at xonomically most wide pread class of major YPP in insects and other oviparous animals is vitellogenin (Vg). Although several insect Vg receptors (VgR) have been characterized biochemically, as of this writing there are only two insects from which VgR sequences have been reported, including the yellowfevcr mosquito (A edes aegypt1) (Sappington et al., 1996; Cho and Raikhel, 2001 ), and the cockroach (Periplaneta americana) (Acc. -
The Roles of Low-Density Lipoprotein Receptor-Related Proteins 5, 6, and 8 in Cancer: a Review
Hindawi Journal of Oncology Volume 2019, Article ID 4536302, 6 pages https://doi.org/10.1155/2019/4536302 Review Article The Roles of Low-Density Lipoprotein Receptor-Related Proteins 5, 6, and 8 in Cancer: A Review Zulaika Roslan,1,2 Mudiana Muhamad,2 Lakshmi Selvaratnam ,3 and Sharaniza Ab-Rahim 2 Institute of Medical and Molecular Biotechnology, Faculty of Medicine, Universiti Teknologi MARA, Cawangan Selangor, Kampus Sungai Buloh, Sungai Buloh, Selangor, Malaysia Department of Biochemistry and Molecular Medicine, Faculty of Medicine, Universiti Teknologi MARA, Cawangan Selangor, Kampus Sungai Buloh, Sungai Buloh, Selangor, Malaysia Jeffrey Cheah School of Medicine & Health Sciences, Monash University Malaysia, Jalan Lagoon Selatan, Bandar sunway, Selangor, Malaysia Correspondence should be addressed to Sharaniza Ab-Rahim; sharaniza [email protected] Received 24 July 2018; Revised 5 February 2019; Accepted 26 February 2019; Published 26 March 2019 Academic Editor: Ozkan Kanat Copyright © 2019 Zulaika Roslan et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Low-density lipoprotein receptor (LDLR) has been an object of research since the 1970s because of its role in various cell functions. Te LDLR family members include LRP5, LRP6, and LRP8. Even though LRP5, 6, and 8 are in the same family, intriguingly, these three proteins have various roles in physiological events, as well as in regulating diferent mechanisms in various kinds of cancers. LRP5, LRP6, and LRP8 have been shown to play important roles in a broad panel of cancers. -
Oxidized Phospholipids Regulate Amino Acid Metabolism Through MTHFD2 to Facilitate Nucleotide Release in Endothelial Cells
ARTICLE DOI: 10.1038/s41467-018-04602-0 OPEN Oxidized phospholipids regulate amino acid metabolism through MTHFD2 to facilitate nucleotide release in endothelial cells Juliane Hitzel1,2, Eunjee Lee3,4, Yi Zhang 3,5,Sofia Iris Bibli2,6, Xiaogang Li7, Sven Zukunft 2,6, Beatrice Pflüger1,2, Jiong Hu2,6, Christoph Schürmann1,2, Andrea Estefania Vasconez1,2, James A. Oo1,2, Adelheid Kratzer8,9, Sandeep Kumar 10, Flávia Rezende1,2, Ivana Josipovic1,2, Dominique Thomas11, Hector Giral8,9, Yannick Schreiber12, Gerd Geisslinger11,12, Christian Fork1,2, Xia Yang13, Fragiska Sigala14, Casey E. Romanoski15, Jens Kroll7, Hanjoong Jo 10, Ulf Landmesser8,9,16, Aldons J. Lusis17, 1234567890():,; Dmitry Namgaladze18, Ingrid Fleming2,6, Matthias S. Leisegang1,2, Jun Zhu 3,4 & Ralf P. Brandes1,2 Oxidized phospholipids (oxPAPC) induce endothelial dysfunction and atherosclerosis. Here we show that oxPAPC induce a gene network regulating serine-glycine metabolism with the mitochondrial methylenetetrahydrofolate dehydrogenase/cyclohydrolase (MTHFD2) as a cau- sal regulator using integrative network modeling and Bayesian network analysis in human aortic endothelial cells. The cluster is activated in human plaque material and by atherogenic lipo- proteins isolated from plasma of patients with coronary artery disease (CAD). Single nucleotide polymorphisms (SNPs) within the MTHFD2-controlled cluster associate with CAD. The MTHFD2-controlled cluster redirects metabolism to glycine synthesis to replenish purine nucleotides. Since endothelial cells secrete purines in response to oxPAPC, the MTHFD2- controlled response maintains endothelial ATP. Accordingly, MTHFD2-dependent glycine synthesis is a prerequisite for angiogenesis. Thus, we propose that endothelial cells undergo MTHFD2-mediated reprogramming toward serine-glycine and mitochondrial one-carbon metabolism to compensate for the loss of ATP in response to oxPAPC during atherosclerosis. -
S41467-018-03432-4.Pdf
ARTICLE DOI: 10.1038/s41467-018-03432-4 OPEN Structural basis for the recognition of LDL-receptor family members by VSV glycoprotein Jovan Nikolic 1, Laura Belot1, Hélène Raux1, Pierre Legrand 2, Yves Gaudin 1 & Aurélie A. Albertini1 Vesicular stomatitis virus (VSV) is an oncolytic rhabdovirus and its glycoprotein G is widely used to pseudotype other viruses for gene therapy. Low-density lipoprotein receptor (LDL-R) serves as a major entry receptor for VSV. Here we report two crystal structures of VSV G in 1234567890():,; complex with two distinct cysteine-rich domains (CR2 and CR3) of LDL-R, showing that their binding sites on G are identical. We identify two basic residues on G, which are essential for its interaction with CR2 and CR3. Mutating these residues abolishes VSV infectivity even though VSV can use alternative receptors, indicating that all VSV receptors are members of the LDL-R family. Collectively, our data suggest that VSV G has specifically evolved to interact with receptor CR domains. These structural insights into the interaction between VSV G and host cell receptors provide a basis for the design of recombinant viruses with an altered tropism. 1 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France. 2 Synchrotron SOLEIL, 91192 Gif-sur-Yvette cedex, France. These authors contributed equally: Jovan Nikolic, Laura Belot. Correspondence and requests for materials should be addressed to Y.G. (email: [email protected]) or to A.Albertini. (email: [email protected]) NATURE COMMUNICATIONS | (2018) 9:1029 | DOI: 10.1038/s41467-018-03432-4 | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | DOI: 10.1038/s41467-018-03432-4 esicular stomatitis virus (VSV) is an enveloped, negative- environment of the endocytic vesicle, G triggers the fusion Vstrand RNA virus that belongs to the Vesiculovirus genus between the viral and endosomal membranes, which releases the of the Rhabdovirus family. -
Molecular Targeting and Enhancing Anticancer Efficacy of Oncolytic HSV-1 to Midkine Expressing Tumors
University of Cincinnati Date: 12/20/2010 I, Arturo R Maldonado , hereby submit this original work as part of the requirements for the degree of Doctor of Philosophy in Developmental Biology. It is entitled: Molecular Targeting and Enhancing Anticancer Efficacy of Oncolytic HSV-1 to Midkine Expressing Tumors Student's name: Arturo R Maldonado This work and its defense approved by: Committee chair: Jeffrey Whitsett Committee member: Timothy Crombleholme, MD Committee member: Dan Wiginton, PhD Committee member: Rhonda Cardin, PhD Committee member: Tim Cripe 1297 Last Printed:1/11/2011 Document Of Defense Form Molecular Targeting and Enhancing Anticancer Efficacy of Oncolytic HSV-1 to Midkine Expressing Tumors A dissertation submitted to the Graduate School of the University of Cincinnati College of Medicine in partial fulfillment of the requirements for the degree of DOCTORATE OF PHILOSOPHY (PH.D.) in the Division of Molecular & Developmental Biology 2010 By Arturo Rafael Maldonado B.A., University of Miami, Coral Gables, Florida June 1993 M.D., New Jersey Medical School, Newark, New Jersey June 1999 Committee Chair: Jeffrey A. Whitsett, M.D. Advisor: Timothy M. Crombleholme, M.D. Timothy P. Cripe, M.D. Ph.D. Dan Wiginton, Ph.D. Rhonda D. Cardin, Ph.D. ABSTRACT Since 1999, cancer has surpassed heart disease as the number one cause of death in the US for people under the age of 85. Malignant Peripheral Nerve Sheath Tumor (MPNST), a common malignancy in patients with Neurofibromatosis, and colorectal cancer are midkine- producing tumors with high mortality rates. In vitro and preclinical xenograft models of MPNST were utilized in this dissertation to study the role of midkine (MDK), a tumor-specific gene over- expressed in these tumors and to test the efficacy of a MDK-transcriptionally targeted oncolytic HSV-1 (oHSV). -
LRP11 (D-1): Sc-514698
SANTA CRUZ BIOTECHNOLOGY, INC. LRP11 (D-1): sc-514698 BACKGROUND APPLICATIONS Members of the LDL receptor gene family, including LDLR (low density lipopro- LRP11 (D-1) is recommended for detection of LRP11 of mouse, rat and human tein receptor), LRP1 (low density lipoprotein related protein), Megalin (also origin by Western Blotting (starting dilution 1:100, dilution range 1:100- designated GP330), VLDLR (very low density lipoprotein receptor) and ApoER2 1:1000), immunoprecipitation [1-2 µg per 100-500 µg of total protein (1 ml are characterized by a cluster of cysteine-rich class A repeats, epidermal of cell lysate)], immunofluorescence (starting dilution 1:50, dilution range growth factor (EGF)-like repeats, YWTD repeats and an O-linked sugar domain. 1:50-1:500) and solid phase ELISA (starting dilution 1:30, dilution range LRP11 (low density lipoprotein receptor-related protein 11), also known as 1:30-1:3000). MANSC3, is a 500 amino acid single-pass type I membrane protein that exists Suitable for use as control antibody for LRP11 siRNA (h): sc-95503, LRP11 as two alternatively spliced isoforms. LRP11 is encoded by a gene located on siRNA (m): sc-149044, LRP11 shRNA Plasmid (h): sc-95503-SH, LRP11 shRNA human chromosome 6q25.1. Chromosome 6 contains 170 million base pairs Plasmid (m): sc-149044-SH, LRP11 shRNA (h) Lentiviral Particles: sc-95503-V and comprises nearly 6% of the human genome. Deletion of a portion of the and LRP11 shRNA (m) Lentiviral Particles: sc-149044-V. q arm of chromosome 6 is associated with early onset intestinal cancer, sug- gesting the presence of a cancer susceptibility locus.