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1 1 DNA Barcodes Reveal Deeply Neglected Diversity and Numerous
Page 1 of 57 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. 12 3Institut de Systématique Evolution Biodiversité (ISYEB), Muséum national d'Histoire naturelle, 13 CNRS, Sorbonne Université, EPHE, 57 rue Cuvier, CP 50, 75005 Paris, France. 14 4 Landesmuseum für Kärnten, Abteilung Zoologie, Museumgasse 2, 9020 Klagenfurt, Austria 15 5 Department of Entomology, University of Antananarivo, Antananarivo 101, Madagascar 16 6 Centre for Biodiversity Genomics, University of Guelph, 50 Stone Road E., Guelph, ON 17 N1G2W1, Canada 18 7Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Genome Downloaded from www.nrcresearchpress.com by UNIV GUELPH on 10/03/18 19 Montpellier–Université Paul-Valéry Montpellier–EPHE), 1919 Route de Mende, F-34293 20 Montpellier, France. 21 8Department of Life Sciences, Natural History Museum, Cromwell Road, SW7 5BD, UK. 22 23 24 Email for correspondence: [email protected] For personal use only. This Just-IN manuscript is the accepted prior to copy editing and page composition. It may differ from final official version of record. 1 Page 2 of 57 25 26 Abstract 27 Madagascar is a prime evolutionary hotspot globally, but its unique biodiversity is under threat, 28 essentially from anthropogenic disturbance. -
DNA Barcodes Reveal Deeply Neglected Diversity and Numerous Invasions of Micromoths in Madagascar
Genome DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in Madagascar Journal: Genome Manuscript ID gen-2018-0065.R2 Manuscript Type: Article Date Submitted by the 17-Jul-2018 Author: Complete List of Authors: Lopez-Vaamonde, Carlos; Institut National de la Recherche Agronomique (INRA), ; Institut de Recherche sur la Biologie de l’Insecte (IRBI), Sire, Lucas; Institut de Recherche sur la Biologie de l’Insecte Rasmussen,Draft Bruno; Institut de Recherche sur la Biologie de l’Insecte Rougerie, Rodolphe; Institut Systématique, Evolution, Biodiversité (ISYEB), Wieser, Christian; Landesmuseum für Kärnten Ahamadi, Allaoui; University of Antananarivo, Department Entomology Minet, Joël; Institut de Systematique Evolution Biodiversite deWaard, Jeremy; Biodiversity Institute of Ontario, University of Guelph, Decaëns, Thibaud; Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), , CEFE UMR 5175 CNRS Lees, David; Natural History Museum London Keyword: Africa, invasive alien species, Lepidoptera, Malaise trap, plant pests Is the invited manuscript for consideration in a Special 7th International Barcode of Life Issue? : https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 57 Genome 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. -
Local and Regional Influences on Arthropod Community
LOCAL AND REGIONAL INFLUENCES ON ARTHROPOD COMMUNITY STRUCTURE AND SPECIES COMPOSITION ON METROSIDEROS POLYMORPHA IN THE HAWAIIAN ISLANDS A DISSERTATION SUBMITTED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI'I IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN ZOOLOGY (ECOLOGY, EVOLUTION AND CONSERVATION BIOLOGy) AUGUST 2004 By Daniel S. Gruner Dissertation Committee: Andrew D. Taylor, Chairperson John J. Ewel David Foote Leonard H. Freed Robert A. Kinzie Daniel Blaine © Copyright 2004 by Daniel Stephen Gruner All Rights Reserved. 111 DEDICATION This dissertation is dedicated to all the Hawaiian arthropods who gave their lives for the advancement ofscience and conservation. IV ACKNOWLEDGEMENTS Fellowship support was provided through the Science to Achieve Results program of the U.S. Environmental Protection Agency, and training grants from the John D. and Catherine T. MacArthur Foundation and the National Science Foundation (DGE-9355055 & DUE-9979656) to the Ecology, Evolution and Conservation Biology (EECB) Program of the University of Hawai'i at Manoa. I was also supported by research assistantships through the U.S. Department of Agriculture (A.D. Taylor) and the Water Resources Research Center (RA. Kay). I am grateful for scholarships from the Watson T. Yoshimoto Foundation and the ARCS Foundation, and research grants from the EECB Program, Sigma Xi, the Hawai'i Audubon Society, the David and Lucille Packard Foundation (through the Secretariat for Conservation Biology), and the NSF Doctoral Dissertation Improvement Grant program (DEB-0073055). The Environmental Leadership Program provided important training, funds, and community, and I am fortunate to be involved with this network. -
Lepidoptera on the Introduced Robinia Pseudoacacia in Slovakia, Central Europe
Check List 8(4): 709–711, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution Lepidoptera on the introduced Robinia pseudoacacia in PECIES S OF ISTS L Slovakia, Central Europe Miroslav Kulfan E-mail: [email protected] Comenius University, Faculty of Natural Sciences, Department of Ecology, Mlynská dolina B-1, SK-84215 Bratislava, Slovakia. Abstract: Robinia pseudoacacia A current checklist of Lepidoptera that utilize as a hostplant in Slovakia (Central Europe) faunalis provided. community. The inventory Two monophagous is based on species, a bibliographic the leaf reviewminers andMacrosaccus new unreported robiniella data and from Parectopa southwest robiniella Slovakia., and Thethe polyphagouslist includes 35pest Lepidoptera Hyphantria species cunea belonging to 10 families. Most species are polyphagous and belong to Euro-Siberian have subsequently been introduced to Slovakia. Introduction E. The area is a polygon enclosed by the towns of Bratislava, Robinia pseudoacacia a widespread species in its native habitat in southeastern North America. It was L.introduced (black locust, to orEurope false acacia),in 1601 is Komárno, Veľký Krtíš and Myjava. Ten plots were located in the southern part of the study area. Most were located in theThe remnant trophic ofgroups the original of the floodplain Lepidoptera forests larvae that found were (Chapman 1935). The first mention of planting the species distributed along the Danube and Morava rivers. (Keresztesiin Slovakia dates 1965). from Today, 1750, itwhen is widespread black locust wasthroughout planted (1986). The zoogeographical distribution of the species western,around the central, fortress eastern in Komárno and southern in southern Europe, Slovakia where followswere defined the arrangement following the give system by Reiprichof Brown (2001). -
Use of a Native and an Exotic Malvaceae by the Little Known Skipper Pyrgus Bocchoris Trisignatus (Mabille) (Hesperiidae) in Northern Chile
VOLUME 67, N UMBER 3 GENERAL NOTES 225 Journal of the Lepidopterists’ Society 67(3), 2013, 225-226 USE OF A NATIVE AND AN EXOTIC MALVACEAE BY THE LITTLE KNOWN SKIPPER PYRGUS BOCCHORIS TRISIGNATUS (MABILLE) (HESPERIIDAE) IN NORTHERN CHILE Additional key words: Folivorous, Naturalized, Malva nicaeensis, Tarasa operculata Many butterflies are highly specialized in their use of characterized by a typical fauna and flora (Luebert & host plants. Some are monophagous (Brückmann et al. Pliscoff 2006). This skipper is one of the more frequently 2011); at least at a local scale (Jordano et al. 1990, Vargas observed butterflies in many of these situations, 2012). Despite this tendency towards specialization, including relatively pristine areas and also highly however, oviposition by native butterflies on exotic modified agricultural lands. Shapiro (1991) indicated that plants, and the subsequent successful larval a Chilean representative of P. bocchoris (i.e.: trisignatus ) development, has been documented many times within is associated with weedy mallows (Malvaceae), but the New World fauna and is probably a global nothing more was published thereafter dealing with the phenomenon (Shapiro 2006). These host range shifts field biology of this skipper. Thus, the objective of this have been remarkably well studied in California, USA, paper is to document two Malvaceae host plants for P. b. where alien hosts are very important for the maintenance trisignatus based on field collections performed in of the native butterfly fauna in both urban and suburban northern Chile. environments (Shapiro 2002, Graves & Shapiro 2003). In October 2008, some Hesperiidae larvae were Recently, Jahner et al. (2011) have shown that the use of collected on leaves of the exotic mallow Malva nicaeensis exotic hosts is predicted by geographic range and native All. -
Checkered Beetles Moths (Lepidoptera: Gracillariidae) – Hazardous Phytophags of Arboreal and Shrubby Plants of Botanical Gardens and Plantings of Kiev M
UDC 632.634.791.937 (477.75) © 2017 Checkered beetles moths (Lepidoptera: Gracillariidae) – hazardous phytophags of arboreal and shrubby plants of botanical gardens and plantings of Kiev M. Lisovyi, O. Sylchuk Natsional University of Life and Environmental Sciences of Ukraine, Heroev Oborony str., 13, Kyiv, 03041, Ukraine P. Chumak, V. Kovalchuk, Botanichny Garden of Acad. O. Fomina The purpose. To carry out probes on revealing and specification of species composition of checkered moths (Lepidoptera: Gracillariidae) in conditions of botanical gardens and plantings of Kiev. Methods. Standard methods of faunistic research in entomology, population ecology, and protection of plants. Results. It is determined that 24 kinds of checkered moths are eating 54 kinds of plants which are widely used for gardening in Kiev. For the first time the following kinds are revealed: Phyllonorycter issikii, Phyllonorycter platani, and Phyllonorycter emberizaepennella. At calculation of Palii-Kovnatski indexes they specified that in city plantings the dominant phytophags are Cameraria ohridella (94,11%), Phyllonorycter populifoliella (86,37%) and Gracillaria syringella (59,14%). They consider that in formation of the secondary areal of invasion kinds of checkered moths the great value has an areal of spread of the host-plant. Environmental analysis is carried out of checkered moths of family Gracillariidae which is spread in cities of the Europe and which are absent in fauna of cities of Ukraine. That has important theoretical and practical value for ecology, entomology and protection of plants against hazardous checkered moths. Conclusions. All the probed kinds of checkered moths by their trophic specialization may be distributed into polyphages (6 kinds), oligophages (14 kinds) and monophages (3 kinds). -
A New Leaf-Mining Moth from New Zealand, Sabulopteryx Botanica Sp
A peer-reviewed open-access journal ZooKeys 865: 39–65A new (2019) leaf-mining moth from New Zealand, Sabulopteryx botanica sp. nov. 39 doi: 10.3897/zookeys.865.34265 MONOGRAPH http://zookeys.pensoft.net Launched to accelerate biodiversity research A new leaf-mining moth from New Zealand, Sabulopteryx botanica sp. nov. (Lepidoptera, Gracillariidae, Gracillariinae), feeding on the rare endemic shrub Teucrium parvifolium (Lamiaceae), with a revised checklist of New Zealand Gracillariidae Robert J.B. Hoare1, Brian H. Patrick2, Thomas R. Buckley1,3 1 New Zealand Arthropod Collection (NZAC), Manaaki Whenua–Landcare Research, Private Bag 92170, Auc- kland, New Zealand 2 Wildlands Consultants Ltd, PO Box 9276, Tower Junction, Christchurch 8149, New Ze- aland 3 School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland, New Zealand Corresponding author: Robert J.B. Hoare ([email protected]) Academic editor: E. van Nieukerken | Received 4 March 2019 | Accepted 3 May 2019 | Published 22 Jul 2019 http://zoobank.org/C1E51F7F-B5DF-4808-9C80-73A10D5746CD Citation: Hoare RJB, Patrick BH, Buckley TR (2019) A new leaf-mining moth from New Zealand, Sabulopteryx botanica sp. nov. (Lepidoptera, Gracillariidae, Gracillariinae), feeding on the rare endemic shrub Teucrium parvifolium (Lamiaceae), with a revised checklist of New Zealand Gracillariidae. ZooKeys 965: 39–65. https://doi.org/10.3897/ zookeys.865.34265 Abstract Sabulopteryx botanica Hoare & Patrick, sp. nov. (Lepidoptera, Gracillariidae, Gracillariinae) is described as a new species from New Zealand. It is regarded as endemic, and represents the first record of its genus from the southern hemisphere. Though diverging in some morphological features from previously de- scribed species, it is placed in genus Sabulopteryx Triberti, based on wing venation, abdominal characters, male and female genitalia and hostplant choice; this placement is supported by phylogenetic analysis based on the COI mitochondrial gene. -
Synteny Analysis in Rosids with a Walnut Physical Map Reveals Slow Genome Evolution in Long-Lived Woody Perennials Ming-Cheng Luo1, Frank M
Luo et al. BMC Genomics (2015) 16:707 DOI 10.1186/s12864-015-1906-5 RESEARCH ARTICLE Open Access Synteny analysis in Rosids with a walnut physical map reveals slow genome evolution in long-lived woody perennials Ming-Cheng Luo1, Frank M. You2, Pingchuan Li2, Ji-Rui Wang1,4, Tingting Zhu1, Abhaya M. Dandekar1, Charles A. Leslie1, Mallikarjuna Aradhya3, Patrick E. McGuire1 and Jan Dvorak1* Abstract Background: Mutations often accompany DNA replication. Since there may be fewer cell cycles per year in the germlines of long-lived than short-lived angiosperms, the genomes of long-lived angiosperms may be diverging more slowly than those of short-lived angiosperms. Here we test this hypothesis. Results: We first constructed a genetic map for walnut, a woody perennial. All linkage groups were short, and recombination rates were greatly reduced in the centromeric regions. We then used the genetic map to construct a walnut bacterial artificial chromosome (BAC) clone-based physical map, which contained 15,203 exonic BAC-end sequences, and quantified with it synteny between the walnut genome and genomes of three long-lived woody perennials, Vitis vinifera, Populus trichocarpa,andMalus domestica, and three short-lived herbs, Cucumis sativus, Medicago truncatula, and Fragaria vesca. Each measure of synteny we used showed that the genomes of woody perennials were less diverged from the walnut genome than those of herbs. We also estimated the nucleotide substitution rate at silent codon positions in the walnut lineage. It was one-fifth and one-sixth of published nucleotide substitution rates in the Medicago and Arabidopsis lineages, respectively. We uncovered a whole-genome duplication in the walnut lineage, dated it to the neighborhood of the Cretaceous-Tertiary boundary, and allocated the 16 walnut chromosomes into eight homoeologous pairs. -
Characterization of the Complete Chloroplast Genome of Platycarya Strobilacea (Juglandaceae)
Conservation Genet Resour (2017) 9:79–81 DOI 10.1007/s12686-016-0624-x TECHNICAL NOTE Characterization of the complete chloroplast genome of Platycarya strobilacea (Juglandaceae) Jing Yan1 · Kai Han1 · Shuyun Zeng1 · Peng Zhao1 · Keith Woeste2 · Jianfang Li1 · Zhan-Lin Liu1 Received: 1 September 2016 / Accepted: 4 October 2016 / Published online: 6 October 2016 © Springer Science+Business Media Dordrecht 2016 Abstract. The whole chloroplast genome (cp genome) The overall AT content of the cp genome is 64 %, and the sequence of Platycarya strobilacea was characterized corresponding values of the LSC, SSC and IR regions are from Illumina pair-end sequencing data. The complete cp 66.4, 70.1 and 57.5 %, respectively. Phylogenetic analysis genome was 160,994 bp in length and contained a large confirmed the placement of P. strobilacea near to Juglans. single copy region (LSC) of 90,225 bp and a small single copy region (SSC) of 18,371 bp, which were separated Keywords Platycarya strobilacea · Hickory · China · by a pair of inverted repeat regions (IRs, 26,199 bp). The Conservation · Chloroplast genome genome contained 130 genes, including 85 protein-coding genes (80 PCG species), 36 tRNA genes (29 tRNA spe- cies) and 8 ribosomal RNA genes (4 rRNA species). Most Platycarya strobilacea, the only species in the monotypic genes occur as a single copy, but 15 genes are duplicated. genus Platycarya (Juglandaceae), mainly grows as scat- tered individuals in evergreen forests of South China (Chen et al. 2012). As one of main components of the local vegeta- tion, this species plays a key role in the forest ecosystems. -
Contents to Our Readers
http://www-naweb.iaea.org/nafa/index.html http://www.fao.org/ag/portal/index_en.html No. 89, July 2017 Contents To Our Readers 1 Coordinated Research Projects 16 Other News 31 Staff 4 Developments at the Insect Pest Relevant Published Articles 37 Control Laboratory 19 Forthcoming Events 2017 5 Papers in Peer Reports 25 Reviewed Journals 39 Past Events 2016 6 Announcements 28 Other Publications 43 Technical Cooperation Field Projects 7 In Memoriam 30 To Our Readers Participants of the Third International Conference on Area-wide Management of Insect Pests: Integrating the Sterile Insect and Related Nuclear and Other Techniques, held from 22-26 May 2017 in Vienna, Austria. Over the past months staff of the Insect Pest Control sub- tries, six international organization, and nine exhibitors. As programme was very occupied with preparations for the in previous FAO/IAEA Area-wide Conferences, it covered Third FAO/IAEA International Conference on “Area-wide the area-wide approach in a very broad sense, including the Management of Insect Pests: Integrating the Sterile Insect development and integration of many non-SIT technolo- and Related Nuclear and Other Techniques”, which was gies. successfully held from 22-26 May 2017 at the Vienna In- The concept of area-wide integrated pest management ternational Centre, Vienna, Austria. The response and in- (AW-IPM), in which the total population of a pest in an terest of scientists and governments, as well as the private area is targeted, is central to the effective application of the sector and sponsors were once more very encouraging. The Sterile Insect Technique (SIT) and is increasingly being conference was attended by 360 delegates from 81 coun- considered for related genetic, biological and other pest Insect Pest Control Newsletter, No. -
Prickly Acacia in Queensland Is Generally Accepted to Be Acacia Nilotica Subspecies Indica
PRICKLY ACACIA Prickly acacia (Acacia nilotica) in Queensland PEST STATUS REVIEW SERIES - LAND PROTECTION BRANCH Edited by A.P. Mackey Assessment team: M. Barker W. Dorney P. James P. Jeffrey N. March J. Marohasy D. Panetta Acknowledgements This assessment draws heavily on reports by P. Jeffrey and M. Marker and valuable discussions with J. Carter. Cover and contents design: Grant Flockhart and Sonia Jordan Photographic credits: Natural Resources and Mines staff ISBN 0 7242 6969 X Published by the Department of Natural Resources and Mines, Qld. Information in this document may be copied for personal use or published for educational purposes, provided that any extracts are fully acknowledged. Land Protection Department of Natural Resources and Mines Locked Bag 40, Coorparoo Delivery Centre, Q, 4151 Contents 1.0 Summary.....................................................................................................1 2.0 Taxonomic Status. .....................................................................................2 3.0 History of Introduction and Spread. .........................................................3 4.0 Current and Predicted Potential Distribution. .........................................4 5.0 Estimates of Current and Potential Impact..............................................7 5.1 Impact on Primary Industry............................................................................ 7 5.2 Control Costs. ................................................................................................ 7 5.3 Environmental -
Arthropod Pests
IAEA-TECDOC-1082 XA9950282--W6 Irradiationa as quarantine treatmentof arthropod pests Proceedings finala of Research Co-ordination Meeting organizedthe by Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture and held Honolulu,in Hawaii, November3-7 1997 INTERNATIONAL ATOMIC ENERGY AGENCY /A> 30- 22 199y Ma 9 J> The originating Section of this publication in the IAEA was: Food and Environmental Protection Section International Atomic Energy Agency Wagramer Strasse 5 0 10 x Bo P.O. A-1400 Vienna, Austria The IAEA does not normally maintain stocks of reports in this series However, copies of these reports on microfiche or in electronic form can be obtained from IMS Clearinghouse International Atomic Energy Agency Wagramer Strasse5 P.O.Box 100 A-1400 Vienna, Austria E-mail: CHOUSE® IAEA.ORG URL: http //www laea org/programmes/mis/inis.htm Orders shoul accompaniee db prepaymeny db f Austriao t n Schillings 100,- in the form of a cheque or in the form of IAEA microfiche service coupons which may be ordered separately from the INIS Clearinghouse IRRADIATIO QUARANTINA S NA E TREATMENF TO ARTHROPOD PESTS IAEA, VIENNA, 1999 IAEA-TECDOC-1082 ISSN 1011-4289 ©IAEA, 1999 Printe IAEe th AustriAn y i d b a May 1999 FOREWORD Fresh horticultural produce from tropical and sub-tropical areas often harbours insects and mites and are quarantined by importing countries. Such commodities cannot gain access to countries which have strict quarantine regulations suc Australias ha , Japan Zealanw Ne , d e Uniteth d dan State f Americo s a unless treaten approvea y b d d method/proceduro t e eliminate such pests.