A Preliminary List of the Lichens of New York
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Supplementary Material for Nelson, P. R., B. Mccune & D. K. Swanson
Supplementary material for Nelson, P. R., B. McCune & D. K. Swanson. 2015. Lichen traits and species as indicators of vegetation and environment. The Bryologist 118(3): XX–XX. Supplementary Table S2. Trait matrix (alphabetical by species). “1” indicates a species possesses that trait. cladoniiform Filamentous Squamulose Cyano Erect Appressed 3D s branched Tripartite Fruticose Terricole Epiphyte Lignicole Saxicole p soredia lobules Foliose Simple foliose Green rawlin isida foliose Lichen Species Subspecies richly Only g Alectoria ochroleuca 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Allantoparmelia almquistii 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allantoparmelia alpicola 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allocetraria madreporiformis 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Anaptychia bryorum 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia centrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia incurva 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 Arctoparmelia separata 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia subcentrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Asahinea chrysantha 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Baeomyces carneus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces placophyllus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces rufus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Blennothallia crispa 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 Brodoa oroarctica 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Bryocaulon divergens 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria capillaris 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria chalybeiformis 1 0 0 0 0 1 0 0 1 0 0 0 0 -
<I>Punctelia</I> from SãO Paulo State, Brazil
MYCOTAXON Volume 109, pp. 49–61 July–September 2009 Four new species of Punctelia from São Paulo State, Brazil Marcelo Pinto Marcelli1 & Patrícia Jungbluth2 1 [email protected] – 2 [email protected] Instituto de Botânica, Seção de Micologia e Liquenologia Caixa Postal 3005, São Paulo / SP 01061-970, Brazil John A. Elix [email protected] Department of Chemistry, Building 33, Australian National University Canberra, A.C.T. 0200, Australia Abstract — The following new species ofPunctelia are described from remnant cerrado forests in São Paulo State, Brazil: Punctelia crispa, P. digitata, P. imbricata, and P. roseola. A key to the seven species of Punctelia found in the study area is presented. Keywords — Punctelia colombiana, Punctelia constantimontium, Punctelia fimbriata, Punctelia graminicola, Punctelia rudecta, Punctelia appalachensis Introduction The Brazilian cerrado is included in the savanna world biome. It is recognized as one of the world’s five hot spots of biodiversity and threatened vegetation (Fonseca et al. 1999). Cerrado formation is structurally and physiognomically heterogeneous, varying from grasslands (campo limpo) to arboreal structures (cerradão) (Coutinho 1978). In São Paulo State, cerrado vegetation originally occupied 20% of the territory, but at present only ca. 1% of the original area remains (Zorzetto et al. 2003). In an ongoing effort to describe and document the biodiversity of the lichenized mycota, a survey of Parmeliaceae in remnant cerradoes in inland São Paulo State was performed (Jungbluth 2006). Several new species were recognized, as expected in such a diverse biome (Jungbluth et al. 2008). Thirty species of Punctelia are known worldwide (Egan & Aptroot 2004), sixteen of which are recorded for Brazil (Marcelli 2004). -
The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Phylogeny of the Cetrarioid Core (Parmeliaceae) Based on Five
The Lichenologist 41(5): 489–511 (2009) © 2009 British Lichen Society doi:10.1017/S0024282909990090 Printed in the United Kingdom Phylogeny of the cetrarioid core (Parmeliaceae) based on five genetic markers Arne THELL, Filip HÖGNABBA, John A. ELIX, Tassilo FEUERER, Ingvar KÄRNEFELT, Leena MYLLYS, Tiina RANDLANE, Andres SAAG, Soili STENROOS, Teuvo AHTI and Mark R. D. SEAWARD Abstract: Fourteen genera belong to a monophyletic core of cetrarioid lichens, Ahtiana, Allocetraria, Arctocetraria, Cetraria, Cetrariella, Cetreliopsis, Flavocetraria, Kaernefeltia, Masonhalea, Nephromopsis, Tuckermanella, Tuckermannopsis, Usnocetraria and Vulpicida. A total of 71 samples representing 65 species (of 90 worldwide) and all type species of the genera are included in phylogentic analyses based on a complete ITS matrix and incomplete sets of group I intron, -tubulin, GAPDH and mtSSU sequences. Eleven of the species included in the study are analysed phylogenetically for the first time, and of the 178 sequences, 67 are newly constructed. Two phylogenetic trees, one based solely on the complete ITS-matrix and a second based on total information, are similar, but not entirely identical. About half of the species are gathered in a strongly supported clade composed of the genera Allocetraria, Cetraria s. str., Cetrariella and Vulpicida. Arctocetraria, Cetreliopsis, Kaernefeltia and Tuckermanella are monophyletic genera, whereas Cetraria, Flavocetraria and Tuckermannopsis are polyphyletic. The taxonomy in current use is compared with the phylogenetic results, and future, probable or potential adjustments to the phylogeny are discussed. The single non-DNA character with a strong correlation to phylogeny based on DNA-sequences is conidial shape. The secondary chemistry of the poorly known species Cetraria annae is analyzed for the first time; the cortex contains usnic acid and atranorin, whereas isonephrosterinic, nephrosterinic, lichesterinic, protolichesterinic and squamatic acids occur in the medulla. -
Checklist of Calicioid Lichens and Fungi for Genera with Members in Temperate Western North America Draft: 2012-03-13
Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Checklist of Calicioid Lichens and Fungi For Genera with Members in Temperate Western North America Draft: 2012-03-13 by E. B. Peterson Calicium abietinum, EBP#4640 1 Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Genera Acroscyphus Lév. Brucea Rikkinen Calicium Pers. Chaenotheca Th. Fr. Chaenothecopsis Vainio Coniocybe Ach. = Chaenotheca "Cryptocalicium" – potentially undescribed genus; taxonomic placement is not known but there are resemblances both to Mycocaliciales and Onygenales Cybebe Tibell = Chaenotheca Cyphelium Ach. Microcalicium Vainio Mycocalicium Vainio Phaeocalicium A.F.W. Schmidt Sclerophora Chevall. Sphinctrina Fr. Stenocybe (Nyl.) Körber Texosporium Nádv. ex Tibell & Hofsten Thelomma A. Massal. Tholurna Norman Additional genera are primarily tropical, such as Pyrgillus, Tylophoron About the Species lists Names in bold are believed to be currently valid names. Old synonyms are indented and listed with the current name following (additional synonyms can be found in Esslinger (2011). Names in quotes are nicknames for undescribed species. Names given within tildes (~) are published, but may not be validly published. Underlined species are included in the checklist for North America north of Mexico (Esslinger 2011). Names are given with authorities and original citation date where possible, followed by a colon. Additional citations are given after the colon, followed by a series of abbreviations for states and regions where known. States and provinces use the standard two-letter abbreviation. Regions include: NAm = North America; WNA = western North America (west of the continental divide); Klam = Klamath Region (my home territory). For those not known from North America, continental distribution may be given: SAm = South America; EUR = Europe; ASIA = Asia; Afr = Africa; Aus = Australia. -
Diversidad Y Aspectos Microevolutivos En Cosimbiontes Liquénicos Microevolutive Aspects and Diversity in Lichen Co-Symbionts
UNIVERSIDAD COMPLUTENSE DE MADRID FACULTAD DE FARMACIA Departamento de Biología Vegetal II TESIS DOCTORAL Diversidad y aspectos microevolutivos en cosimbiontes liquénicos Microevolutive aspects and diversity in lichen co-symbionts MEMORIA PARA OPTAR AL GRADO DE DOCTOR PRESENTADA POR David Alors Rodríguez Directores Ana Mª Crespo de las Casas Pradeep K. Divakar Madrid, 2018 © David Alors Rodríguez, 2017 Universidad Complutense de Madrid, Facultad de Farmacia Departamento de Biología Vegetal II DIVERSIDAD Y ASPECTOS MICROEVOLUTIVOS EN COSIMBIONTES LIQUÉNICOS MICROEVOLUTIVE ASPECTS AND DIVERSITY IN LICHEN CO-SYMBIONTS MEMORIA PARA OPTAR AL GRADO DE DOCTOR PRESENTADA POR: David Alors Rodríguez Bajo la dirección de los doctores: Ana Mª Crespo de las Casas y Pradeep K. Divakar Madrid, 2017 Dedicatoria Dedico esta tesis a mi familia por su apoyo incondicional desde mi más tierna infancia. Siempre estuvieron a mi lado y yo al suyo. Y solo en los años de esta tesis y con mis estancias en el extranjero me alejé físicamente de ellos y no pude darles el tiempo que se merecían. Dedico esta tesis a toda mi familia, en especial a esas dos personas tan importantes e influyentes para mí que se han marchado en estos años, pero no del todo porque siguen en nuestra memoria. Agradecimientos En primer lugar agradezco mi educación científica desde la licenciatura en CC. Biológicas en la UA, a mi paso por el instituto Torre de la Sal-CSIC, bajo la supervisión de la Dra. Ana Mª Gomez-Peris. Agradezco la oportunidad que me dio la catedrática Ana Mª Crespo de las Casas, asesorada por el Dr. C. -
Opuscula Philolichenum, 6: 1-XXXX
Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C. -
A Checklist of Lichens Collected During the First Howard Crum Bryological Workshop, Delaware Water Gap National Recreation Area
Opuscula Philolichenum, 2: 1-10. 2005. Contributions to the Lichen Flora of Pennsylvania: A Checklist of Lichens Collected During the First Howard Crum Bryological Workshop, Delaware Water Gap National Recreation Area RICHARD C. HARRIS1 & JAMES C. LENDEMER2 ABSTRACT. – A checklist of 209 species of lichens and lichenicolous fungi collected during the First Howard Crum Bryological Workshop in the Delaware Water Gap National Recreation Area, Pennsylvania, USA is provided. The new species Opegrapha bicolor R.C. Harris & Lendemer, collected during the Foray, is described. Chrysothrix flavovirens Tønsberg and Merismatium peregrinum (Flotow) Triebel are reported as new to North America. On April 23-26, 2004, we were graciously allowed to be commensals during the First Howard Crum Bryological Workshop in the Delaware Water Gap National Recreation Area, Pennsylvania, USA. Given the dearth of knowledge of lichen distributions in Pennsylvania and the overall lack of recent vouchers, this was a valuable opportunity to collect in what turned out to be a rich and interesting area. We were quite surprised by the apparent high lichen diversity, as well as the number of novelties and rarities, in an area so close to the East Coast megalopolis. In four half-days in the field, we collected 209 species in a limited area of the Pennsylvania part of the Park. Some are clearly new to science of which, Opegrapha bicolor is described here (see Endnote). Two presumably undescribed species of Fellhanera will be published elsewhere, and the Halecania will be included in a forthcoming treatment of Ozark lichens. Others are left for the future, as present material (and our knowledge) are inadequate. -
A Preliminary Lichen Checklist of the Redstone Arsenal, Madison County, Alabama
Opuscula Philolichenum, 17: 351-361. 2018. *pdf effectively published online 12October2018 via (http://sweetgum.nybg.org/philolichenum/) A Preliminary Lichen Checklist of the Redstone Arsenal, Madison County, Alabama CURTIS J. HANSEN1 ABSTRACT. – Lichens were surveyed across nine ecologically sensitive areas of the U.S. Army’s Redstone Arsenal in Madison County, Alabama. From a total of 464 collections, 151 species in 64 genera were identified, including 12 state records and three new species currently being described. Prior to this study, only eight lichen species had been documented from the Redstone Arsenal and less than 40 were known from Madison County. Newly reported lichens for Alabama include Caloplaca pollinii, Clauzadea chondrodes, Enchylium coccophorum, Hypotrachyna dentella, Lepraria xanthonica, Phaeophyscia hirsuta, Phaeophyscia leana, Physciella chloantha, Physconia leucoleiptes, Physconia subpallida, Punctelia graminicola, and Usnea halei. Results from this study represent the first lichen survey of the Redstone Arsenal and will serve as a baseline for future studies. KEYWORDS. – Lichen biodiversity, North America, northern Alabama, southern Highland Rim, Tennessee Valley, United States. INTRODUCTION Lichens of northern Alabama are poorly studied and virtually no records have been published from Madison County. Though many papers documenting lichens from nearby regions exist, including the Great Smoky Mountains (Lendemer et al. 2013) and Southern Appalachian Mountains (Dey 1978), there are no published lichen reports from this area of northern Alabama. One state-wide checklist documented two lichen species from Madison County (Hansen 2003). A search of the Consortium of North American Lichen Herbaria (CNALH 2017) resulted in only 38 lichen specimens from Madison County, including eight from Redstone Arsenal (hereafter abbreviated RA). -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
A New Checklist of Lichenised, Lichenicolous and Allied Fungi Reported from South Africa
Page 1 of 4 Original Research A new checklist of lichenised, lichenicolous and allied fungi reported from South Africa Author: Background: The last comprehensive list of lichenised, lichenicolous and allied fungi reported 1 Alan M. Fryday from South Africa was published in 1950. A checklist is important to provide basic information Affiliation: on the extent of the diversity, and to provide the most recent name and classification. 1Department of Plant Biology, Michigan State University, Objective: To present a list of all the lichenised, lichenicolous and allied fungi reported from United States South Africa. Correspondence to: Methods: The list presented is entirely literature based and no attempt has been made to Alan Fryday check the report of any taxa or their status by checking the specimens upon which they are based. Firstly, all taxa that were not reported from within the modern boundaries of South Email: Africa were excluded. Next, the Recent literature on lichens database was searched for literature [email protected] on South African lichens since 1945 and all references checked for new species or new reports, Postal address: which were then added to the list. These names were then checked against Index Fungorum Department of Plant Biology, to ensure that the most current name was being used. Finally, the list was rationalised by Plant Biology Laboratories, 612 Wilson Road, East excluding all synonyms and dubious infraspecific taxa. Lansing, MI, 48824, Results: The current list includes 1750 taxa in 260 genera from mainland South Africa, with United States an additional 100 species and 23 genera from the sub-Antarctic Prince Edward Islands, which Dates: are treated separately. -
The Lichen Flora of Gunib Plateau, Inner-Mountain Dagestan (North-East Caucasus, Russia)
Turkish Journal of Botany Turk J Bot (2013) 37: 753-768 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-1205-4 The lichen flora of Gunib plateau, inner-mountain Dagestan (North-East Caucasus, Russia) 1, 2 Gennadii URBANAVICHUS * , Aziz ISMAILOV 1 Institute of North Industrial Ecology Problems, Kola Science Centre, Russian Academy of Sciences, Apatity, Murmansk Region, Russia 2 Mountain Botanical Garden, Dagestan Scientific Centre, Russian Academy of Sciences, Makhachkala, Republic of Dagestan, Russia Received: 02.05.2012 Accepted: 15.03.2013 Published Online: 02.07.2013 Printed: 02.08.2013 Abstract: As a result of lichenological exploration of the Gunib plateau in the Republic of Dagestan (North-East Caucasus, Russia), we report 402 species of lichenised, 37 lichenicolous, and 7 nonlichenised fungi representing 151 genera. Nineteen species are recorded for the first time for Russia: Abrothallus chrysanthus J.Steiner, Abrothallus microspermus Tul., Caloplaca albopruinosa (Arnold) H.Olivier, Candelariella plumbea Poelt & Vězda, Candelariella rhodax Poelt & Vězda, Cladonia firma (Nyl.) Nyl., Halospora deminuta (Arnold) Tomas. & Cif., Halospora discrepans (J.Lahm ex Arnold) Hafellner, Lichenostigma epipolina Nav.-Ros., Calat. & Hafellner, Milospium graphideorum (Nyl.) D.Hawksw., Mycomicrothelia atlantica D.Hawksw. & Coppins, Parabagliettoa cyanea (A.Massal.) Gueidan & Cl.Roux, Placynthium garovaglioi (A.Massal.) Malme, Polyblastia dermatodes A.Massal., Rusavskia digitata (S.Y.Kondr.) S.Y.Kondr. & Kärnefelt, Squamarina stella-petraea Poelt, Staurothele elenkinii Oxner, Toninia nordlandica Th.Fr., and Verrucaria endocarpoides Servít. In addition, 71 taxa are new records for the Caucasus and 15 are new to Asia. Key words: Lichens, lichenicolous fungi, biodiversity, Gunib plateau, limestone, Dagestan, Caucasus, Russia 1.