Population Structure and Fecundity of Upogebia Omissa (Decapoda: Gebiidea: Upogebiidae) in an Estuarine Region in Sergipe, Northeastern Brazil
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https://theses.gla.ac.uk/ Theses Digitisation: https://www.gla.ac.uk/myglasgow/research/enlighten/theses/digitisation/ This is a digitised version of the original print thesis. Copyright and moral rights for this work are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This work cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Enlighten: Theses https://theses.gla.ac.uk/ [email protected] ASPECTS OF THE BIOLOGY OF THE SQUAT LOBSTER, MUNIDA RUGOSA (FABRICIUS, 1775). Khadija Abdulla Yousuf Zainal, BSc. (Cairo). A thesis submitted for the degree of Doctor of Philosophy to the Faculty of Science at the University of Glasgow. August 1990 Department of Zoology, University of Glasgow, Glasgow, G12 8QQ. University Marine Biological Station, Millport, Isle of Cumbrae, Scotland KA28 OEG. ProQuest Number: 11007559 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 11007559 Published by ProQuest LLC(2018). -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
From Ghost and Mud Shrimp
Zootaxa 4365 (3): 251–301 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2017 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4365.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:C5AC71E8-2F60-448E-B50D-22B61AC11E6A Parasites (Isopoda: Epicaridea and Nematoda) from ghost and mud shrimp (Decapoda: Axiidea and Gebiidea) with descriptions of a new genus and a new species of bopyrid isopod and clarification of Pseudione Kossmann, 1881 CHRISTOPHER B. BOYKO1,4, JASON D. WILLIAMS2 & JEFFREY D. SHIELDS3 1Division of Invertebrate Zoology, American Museum of Natural History, Central Park West @ 79th St., New York, New York 10024, U.S.A. E-mail: [email protected] 2Department of Biology, Hofstra University, Hempstead, New York 11549, U.S.A. E-mail: [email protected] 3Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia 23062, U.S.A. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 252 Introduction . 252 Methods and materials . 253 Taxonomy . 253 Isopoda Latreille, 1817 . 253 Bopyroidea Rafinesque, 1815 . 253 Ionidae H. Milne Edwards, 1840. 253 Ione Latreille, 1818 . 253 Ione cornuta Bate, 1864 . 254 Ione thompsoni Richardson, 1904. 255 Ione thoracica (Montagu, 1808) . 256 Bopyridae Rafinesque, 1815 . 260 Pseudioninae Codreanu, 1967 . 260 Acrobelione Bourdon, 1981. 260 Acrobelione halimedae n. sp. 260 Key to females of species of Acrobelione Bourdon, 1981 . 262 Gyge Cornalia & Panceri, 1861. 262 Gyge branchialis Cornalia & Panceri, 1861 . 262 Gyge ovalis (Shiino, 1939) . 264 Ionella Bonnier, 1900 . -
Upogebia Pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea the Blue Mud Shrimp Family: Upogebiidae
Phylum: Arthropoda, Crustacea Upogebia pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea The blue mud shrimp Family: Upogebiidae Taxonomy: Dana described Gebia (on either side of the mouth), two pairs of pugettensis in 1852 and this species was later maxillae and three pairs of maxillipeds. The redescribed as Upogebia pugettensis maxillae and maxillipeds attach posterior to (Stevens 1928; Williams 1986). the mouth and extend to cover the mandibles (Ruppert et al. 2004). Description Carapace: Bears two rows of 11–12 Size: The type specimen was 50.8 mm in teeth laterally (Fig. 1) in addition to a small length and the illustrated specimen (ovigerous distal spines (13 distal spines, 20 lateral teeth female from Coos Bay, Fig. 1) was 90 mm in on carapace shoulder, see Wicksten 2011). length. Individuals are often larger and reach Carapace with thalassinidean line extending sizes to 100 mm (range 75–112 mm) and from anterior to posterior margin (Wicksten northern specimens are larger than those in 2011). southern California (MacGinitie and Rostrum: Large, tridentate, obtuse, MacGinitie 1949; Wicksten 2011). rough and hairy (Schmitt 1921), the sides Color: Light blue green to deep olive brown bear 3–5 short conical teeth (Wicksten 2011). with brown fringes on pleopods and pleon. Rostral tip shorter than antennular peduncle. Individual color variable and may depend on Two short processes extending on either side feeding habits (see Fig. 321, Kozloff 1993; each with 0–2 dorsal teeth (Wicksten 2011). Wicksten 2011). Teeth: General Morphology: The body of decapod Pereopods: Two to five simple crustaceans can be divided into the walking legs. -
Systematics, Phylogeny, and Taphonomy of Ghost Shrimps (Decapoda): a Perspective from the Fossil Record
73 (3): 401 – 437 23.12.2015 © Senckenberg Gesellschaft für Naturforschung, 2015. Systematics, phylogeny, and taphonomy of ghost shrimps (Decapoda): a perspective from the fossil record Matúš Hyžný *, 1, 2 & Adiël A. Klompmaker 3 1 Geological-Paleontological Department, Natural History Museum Vienna, Burgring 7, 1010 Vienna, Austria; Matúš Hyžný [hyzny.matus@ gmail.com] — 2 Department of Geology and Paleontology, Faculty of Natural Sciences, Comenius University, Mlynská dolina, Ilkovičova 6, SVK-842 15 Bratislava, Slovakia — 3 Florida Museum of Natural History, University of Florida, 1659 Museum Road, PO Box 117800, Gaines- ville, FL 32611, USA; Adiël A. Klompmaker [[email protected]] — * Correspond ing author Accepted 06.viii.2015. Published online at www.senckenberg.de/arthropod-systematics on 14.xii.2015. Editor in charge: Stefan Richter. Abstract Ghost shrimps of Callianassidae and Ctenochelidae are soft-bodied, usually heterochelous decapods representing major bioturbators of muddy and sandy (sub)marine substrates. Ghost shrimps have a robust fossil record spanning from the Early Cretaceous (~ 133 Ma) to the Holocene and their remains are present in most assemblages of Cenozoic decapod crustaceans. Their taxonomic interpretation is in flux, mainly because the generic assignment is hindered by their insufficient preservation and disagreement in the biological classification. Fur- thermore, numerous taxa are incorrectly classified within the catch-all taxonCallianassa . To show the historical patterns in describing fos- sil ghost shrimps and to evaluate taphonomic aspects influencing the attribution of ghost shrimp remains to higher level taxa, a database of all fossil species treated at some time as belonging to the group has been compiled: 250 / 274 species are considered valid ghost shrimp taxa herein. -
Two New Paleogene Species of Mud Shrimp (Crustacea, Decapoda, Upogebiidae) from Europe and North America
Bulletin of the Mizunami Fossil Museum, no. 33 (2006), p. 77–85, 2 pls., 1 fig. © 2006, Mizunami Fossil Museum Two new Paleogene species of mud shrimp (Crustacea, Decapoda, Upogebiidae) from Europe and North America Rene H. B. Fraaije1, Barry W. M. van Bakel1, John W. M. Jagt2, and Yvonne Coole3 1Oertijdmuseum De Groene Poort, Bosscheweg 80, NL-5283 WB Boxtel, the Netherlands <[email protected]> 2Natuurhistorisch Museum Maastricht, de Bosquetplein 6-7, NL-6211 KJ Maastricht, the Netherlands <[email protected]> 3St. Maartenslaan 88, NL-6039 BM Stramproy, the Netherlands Abstract Two new species of the mud shrimp genus Upogebia (Callianassoidea, Upogebiidae) are described; U. lambrechtsi sp. nov. from the lower Eocene (Ypresian) of Egem (northwest Belgium), and U. barti sp. nov. from the upper Oligocene (Chattian) of Washington State (USA). Both new species here described have been collected from small, ball-shaped nodules; they are relatively well preserved and add important new data on the palaeobiogeographic distribution of fossil upogebiids. Key words: Crustacea, Decapoda, Upogebiidae, Eocene, Oligocene, Belgium, USA, new species Introduction Jurassic species of Upogebia have been recorded, in stratigraphic order: On modern tidal flats, burrowing upogebiid shrimps constitute the dominant decapod crustacean group. For instance, in the 1 – Upogebia rhacheochir Stenzel, 1945 (p. 432, text-fig. 12; pl. intertidal zone of the northern Adriatic (Mediterranean, southern 42); Britton Formation (Eagle Ford Group), northwest of Dallas Europe) up to 200 individuals per square metre have been recorded (Texas, USA). Stenzel (1945, p. 408) dated the Britton (Dworschak, 1987). Worldwide, several dozens of species of Formation as early Turonian, but a late Cenomanian age is Upogebia and related genera are known, and their number is still more likely (compare Jacobs et al., 2005). -
Revision of Jaxea Kuemeli BACHMAYER, 1954 (Decapoda
N. Jb. Geol. Palaont. Abh. 260/2, 173-184 Article published online March 2011 Revision of Jaxea kuemeli BACHMAYER, 1954 (Decapoda: Gebiidea: Laomediidae) from the Miocene of Europe, with remarks on the palaeobiogeography of the genus Jaxea NARDO, 1847 Matus Hyzny With 7 figures and 2 tables HYZNY,M. (2011): Revision of Jaxea kuemeli BACHMAYER,1954 (Decapoda: Gebiidea: Laomediidae) from the Miocene of Europe, with remarks on the palaeobiogeography of the genus Jaxea NARDO, 1847. - N. lb. Geol. Paliiont. Abh., 260: 173-184; Stuttgart. Abstract: The present contribution reevaluates the fossil record of the genus Jaxea (Decapoda: Ge- biidea: Laomediidae) and gives an emended diagnosis and an updated description of Jaxea kuemeli based on well preserved material from the lower and middle Miocene strata of Austria, Slovakia and Hungary. The species is distinguished from the extant J. nocturna on the basis of the tooth formula of the chelipeds. The geographic distribution and the palaeobiogeography of the genus is discussed and migration from the Tethys eastward towards the present-day Indo-Pacific Ocean during the Miocene time is proposed. The fossil record of the family Laomediidae is shortly reviewed. The monotypical genus Reschia from the Tithonian of southern Germany once tentatively assigned to Laomediidae is excluded from the family. Key words: Decapoda, Laomediidae, Jaxea, Miocene, palaeobiogeography. 1. Introduction A recent study of the type material of Jaxea kuemeli oriented cervical groove. However, a re-examination BACHMAYER,1954 from the middle Miocene of the of the type material has now revealed that what was Vienna Basin, plus additional specimens from sev- described as a complete dorsal carapace is only a frag- erallocalities in Austria, Slovakia and Hungary (Fig. -
Axiidea (Micheleidae) and Gebiidea (Laomediidae and Upogebiidae) of Panglao, the Philippines
Ann. Naturhist. Mus. Wien, B 121 19–32 Wien, Februar 2019 Axiidea (Micheleidae) and Gebiidea (Laomediidae and Upogebiidae) of Panglao, the Philippines P. C. Dworschak* Abstract A summary of species from one axiidean family and two gebiidean families collected during the Panglao Marine Biodiversity Project 2004 is presented. The axiidean family Micheleidae is represented by one damaged specimen, tentatively identified asMichelea sp. The gebiidean family Laomediidae is represented by two species, Naushonia carinata DWORSCHAK, MARIN & ANKER, 2006 and Axianassa heardi ANKER, 2011. The family Upogebiidae is the most diverse and represented by nine species, Acutigebia sp., Neogebicula monochela (SAKAI, 1967) with one specimen each, Gebiacantha ceratophora (DE MAN, 1905) and G. multispinosa NGOC-HO, 1994 with two and three specimens, respectively, G. laurentae NGOC-HO, 1989 with 21 specimens was the most common followed by Upogebia barbata (STRAHL, 1862) and U. holthuisi SAKAI, 1982 with 8 and 6 specimens, respectively. Figures for seven species of Upogebiidae are presented. Except for U. barbata, all upogebiid species and Axianassa heardi are here recorded the first time from the Philippines. Key words: Axiidea, Micheleidae, Gebiidea, Laomediidae, Upogebiidae, Panglao, Philippines, burrowing shrimp Introduction The international Panglao Marine Biodiversity Project in May-July 2004 consisted of an extensive sampling of molluscs and decapod crustaceans around the island of Panglao, southwest of Bohol, Philippines (BOUCHET et al. 2009). The special task of the author during this survey was to collect axiidean and gebiidean shrimp and their associated decapod and mollusc fauna with the aid of a yabby pump. This sampling of axiideans and gebiideans revealed numerous new records and several undescribed species that have been studied in earlier papers (DWORSCHAK 2006, 2007, 2011a, b, 2014, 2018, DWORSCHAK et al. -
Biology of Mediterranean and Caribbean Thalassinidea (Decapoda)
Biology of Mediterranean and Caribbean Thalassinidea (Decapoda) Peter C. DWORSCHAK Dritte Zoologische Abteilung, Naturhistorisches Museum, Burgring 7, A 1014 Wien, Austria ([email protected]) Abstract Among burrowing organisms, the most complex and extensive burrow systems are found within the Thalassinidea. This group of decapods comprises some 520+ species in currently 11 families and 80+ genera. They live predominantly in very shallow waters, where they often occur in high densities and influence the whole sedimentology and geochemistry of the seabed. In this contribution I present results of studies on the biology of several Mediterranean (Upogebia pusilla, U. tipica, Pestarella tyrrhena, P. candida, Jaxea nocturna) and Caribbean (Axiopsis serratifrons, Neocallichirus grandimana, Glypturus acanthochirus, Corallianassa longiventris) species. Of special interest is the occurrence of debris-filled chambers in the burrows of two callianassid species, Pestarella tyrrhena and Corallianassa longiventris. The possible role of this introduced plant material for the nutrition of the shrimps is discussed. 1. Introduction The Thalassinidea are a group of mainly burrowing decapod shrimps. They have attracted increased attention in recent ecological studies on marine soft-bottom benthos, especially in terms of their influence on the whole sedimentology and geochemistry of the seabed (Ziebis et al., 1996a, b), their bioturbating activities (Rowden & Jones, 1993; Rowden et al., 1998a, b) and consequent effects on benthic community structure (Posey, 1986; Posey et al., 1991; Wynberg & Branch, 1994; Tamaki, 1994). They are of particular interest because they construct very complex and extensive burrow systems (Griffis & Suchanek, 1991; Nickell & Atkinson, 1995). This group of decapods comprises some 520+ species in currently 11 families and 80+ genera. -
(Petagna, 1792) (Thalassinidea, Upogebiidae) from Laboratory-Reared Material
Invertebrate Reproduction and Development, 43: 1 (2003) 83-90 Balaban, PhiladelphiaRehovot 0168-8170/03/$05.008 2003 Balaban Redescription of the larval stages of Upobebiapusilla (Petagna, 1792) (Thalassinidea, Upogebiidae) from laboratory-reared material ANTONMA DOS SANTOS'. and JOSE PAULA* 'Instituto de InvestigapTo das Pescas e do Mar (IPIUAR), Av. de Brasilia, s/n. 1449-006 Lisboa, Portugal Tel. +351 (21) 302-7194; Fax +351 (21) 302-5948; email: [email protected] 'IMR-Laboratdrio Maritimo da Guia, Faculdade de Cigncias, Universidade de Lisboa, fitrada do Guincho, 2750-642 Cascais, Portugal Received 21 November 2001; Accepted 9 December 2002 Summary The complete larval development of Upogebia pusilla (Petagna, 1792) was reared under laboratory conditions and the development comprised four zoeal stages and a megalop. The morphological features were described, illustrated and compared with other known larvae of Upogebia. Key words: Larval development, Upogebiapusilla, Upogebiidae, Decapoda, zoeal stages, megalopal stage. Introduction 1919 from plankton and reared material [four zoeal Upogebia pusilla (Petagna, 1792) is a common stages and post-larva]; U. pusilla (originally as U. species on estuaries in Portugal and occurs from the littoralis) by Dolgopolskaia, 1954 and 1969 [four zoeal English Channel to Mauritania and the Canary Islands, stages and post-larva] and U.deltaura and U. pusilla the Mediterranean, Black Sea and Suez Canal (as U. littoralis) by Heegaard, 1963 [first stage zoea]. (d'Udekem d'Acoz, 1999). Besides U.pusilla, the Although these studies gave some indication of general Upogebiidae family has five other species occurring in form, appendage morphology and chromatophore European waters: Gebiacantha talismani (Bouvier), patterns, the descriptions do not meet with modem day Upogebia deltaura (Leach), U. -
(Decapoda, Gebiidea, Upogebiidae) in the South China Sea
THE SUBFAMILY NEOGEBICULINAE (DECAPODA, GEBIIDEA, UPOGEBIIDAE) IN THE SOUTH CHINA SEA BY WENLIANG LIU1,3) and RUIYU LIU (J.Y. LIU)2,4) 1) Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; Graduate University, Chinese Academy of Sciences, Beijing 100049, China 2) Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China ABSTRACT Three species of the subfamily Neogebiculinae Sakai, 2006 are recorded from the Beibu Gulf (Tonkin Gulf), northern South China Sea. The first species, Neogebicula wistari Ngoc-Ho, 1995 is recorded for the first time from Chinese waters. The other two are described as new to science in this paper. The present authors take great pleasure to name them as Paragebicula bijdeleyi sp.nov.andNeogebicula holthuisi sp. nov. to honor the great carcinologist, the late Dr. Lipke Bijdeley Holthuis. Neogebicula holthuisi is closely allied to N. monochela (Sakai, 1967) but differs markedly in having an elongate rostrum. Paragebicula bijdeleyi sp. nov. is closely related to P. edentata (Lin, Ngoc-Ho & Chan, 2001) but differs markedly in the rostrum bearing marginal denticles. RÉSUMÉ Trois espèces de la sous-famille des Neogebiculinae Sakai, 2006 sont signalées dans le Golfe de Beibu (Golfe de Tonkin), nord de la mer de Chine du Sud. Le première espèce, Neogebicula wistari Ngoc-Ho, 1995 est signalée pour la première fois dans les eaux chinoises. Les deux autres sont décrites dans cet article comme nouvelles pour la science. C’est avec un grand plaisir que les auteurs les dédient à la mémoire du grand carcinologiste Dr. Lipke Bijdeley Holthuis, en les nommant Paragebicula bijdeleyi sp. -
Synopsis of the Family Callianassidae, with Keys to Subfamilies, Genera and Species, and the Description of New Taxa (Crustacea: Decapoda: Thalassinidea)
ZV-326 (pp 03-152) 02-01-2007 14:37 Pagina 3 Synopsis of the family Callianassidae, with keys to subfamilies, genera and species, and the description of new taxa (Crustacea: Decapoda: Thalassinidea) K. Sakai Sakai, K. Synopsis of the family Callianassidae, with keys to subfamilies, genera and species, and the description of new taxa (Crustacea: Decapoda: Thalassinidea). Zool. Verh. Leiden 326, 30.vii.1999: 1-152, figs 1-33.— ISSN 0024-1652/ISBN 90-73239-72-9. K. Sakai, Shikoku University, 771-1192 Tokushima, Japan, e-mail: [email protected]. Key words: Crustacea; Decapoda; Thalassinidae; Callianassidae; synopsis. A synopsis of the family Callianassidae is presented. Defenitions are given of the subfamilies and genera. Keys to the sufamilies, genera, as well as seperate keys to the species occurring in certain bio- geographical areas are provided. At least the synonymy, type-locality, and distribution of the species are listed. The following new taxa are described: Calliapaguropinae subfamily nov., Podocallichirus genus nov., Callianassa whitei spec. nov., Callianassa gruneri spec. nov., Callianassa ngochoae spec. nov., Neocallichirus kempi spec. nov. and Calliax doerjesti spec. nov. Contents Introduction ............................................................................................................................. 3 Systematics .............................................................................................................................. 7 Subfamily Calliapaguropinae nov. .....................................................................................