André Phillips Phd Thesis
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Classical and Molecular Cytogenetic Characterization of Allochthonous European Bitterling Rhodeus Amarus (Cyprinidae, Acheilognathinae) from Northern Italy
Genes Genet. Syst. (2008) 83, p. 417–422 Classical and molecular cytogenetic characterization of allochthonous European bitterling Rhodeus amarus (Cyprinidae, Acheilognathinae) from Northern Italy Angelo Libertini1, Luciana Sola2*, Massimiliano Rampin1, Anna Rita Rossi2, Koji Iijima3 and Takayoshi Ueda3 1Institute of Marine Sciences, National Council for Research, Castello 1364/a, Venice 30122, Italy 2Department of Animal and Human Biology, “La Sapienza” Rome University, Via A. Borelli 50, Rome 00161, Italy 3Department of Biology, Faculty of Education, Utsunomiya University, 350 Mine, Utsunomiya 321-8505, Japan (Received 23 July 2008, accepted 10 September 2008) A cytogenetical study was carried out on 34 specimens of the European bitter- ling Rhodeus amarus (Teleostei: Cyprinidae, Acheilognathinae) from four rivers of the Venice district (NE Italy). This allochthonous fish species was accidentally introduced in the North-East of Italy about 20 years ago and is now rapidly spreading all over the rivers of the Northern part of the country. All the studied specimens are characterised by the same karyotype (2n = 48: 8M + 20SM + 20ST), i.e., the typical one of the native populations of the species. However, a polymor- phism in the number of NOR bearing chromosomes has been found. In fact, in addition to the main species-specific NORs, on the short arms of chromosome pair 7, two to five additional 18S rDNA sites have been revealed by FISH in different specimens. Sequential staining with silver nitrate, chromomycin A3 and DAPI revealed that most of the additional sites are inactive and CMA3-positive. Data herein reported confirm that in spite of an overall morphological karyo- logical conservativeness, significant differences for the finer cytogenetic features can be found within the Acheilognathinae with the 2n = 48 and NF = 76 karyotype. -
Teleostei: Cyprinidae: Acheilognathinae) from China
Zootaxa 3790 (1): 165–176 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3790.1.7 http://zoobank.org/urn:lsid:zoobank.org:pub:BD573A51-6656-4E86-87C2-2411443C38E5 Rhodeus albomarginatus, a new bitterling (Teleostei: Cyprinidae: Acheilognathinae) from China FAN LI1,3 & RYOICHI ARAI2 1Institute of Biodiversity Science, Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Fudan University, Shanghai 200433, China. E-mail: [email protected] 2Department of Zoology, University Museum, University of Tokyo, 7–3–1 Hongo, Bunkyo-ku, Tokyo. 113-0033, Japan. E-mail: [email protected] 3Corresponding author Abstract Rhodeus albomarginatus, new species, is described from the Lvjiang River, a tributary flowing into Poyang Lake of Yang- tze River basin, in Anhui Province, China. It is distinguished from all congeneric species by unique combination of char- acters: branched dorsal-fin rays 10; branched anal-fin rays 10–11; longest simple rays of dorsal and anal fins strong and stiff, distally segmented; pelvic fin rays i 6; longitudinal scale series 34–36; transverse scale series 11; pored scales 4–7; vertebrae 33–34; colour pattern of adult males (iris black, belly reddish-orange, central part of caudal fin red, dorsal and anal fins of males edged with white margin). Key words: Cyprinidae, Rhodeus albomarginatus, new species, Yangtze River, China Introduction Bitterling belong to the subfamily Acheilognathinae in Cyprinidae and include three genera, Acheilognathus, Rhodeus and Tanakia. The genus Rhodeus can be distinguished from the other two genera by having an incomplete lateral line, no barbels, and wing-like yolk sac projections in larvae (Arai & Akai, 1988). -
Tropical Fish Now That You Have Set up Your Aquarium and Are Starting to Think About Adding Fish, You Have Many Choices to Choose From
Tropical Fish Now that you have set up your aquarium and are starting to think about adding fish, you have many choices to choose from. One specific type of fish is the tropical fish, found in tropical waters all over the world and in areas near the equator. They can live in fresh water such as ponds, lakes, streams and even oceans that are salt water. In home aquariums, tropical fish are usually kept in heated fish tanks or in areas where the ambient room temperature is between 70°F - 82°F. As you make your decisions, be sure to research their compatibility, hardiness and if they are a schooling fish or not. Selecting the right fish will help ensure that you have hours of enjoyment and success. Today, many freshwater fish are captive bred either in fish farms or by hobbyists, making them readily available and easy to find. Popular freshwater tropical fish include Bettas, Guppies, Tetras, Swordtails, Platys, Barbs, Mollies and Corydoras among others. Sometimes people starting out in the aquatic hobby may not always provide their fish with ideal living conditions. Fish recommended for beginners and new aquariums must be durable and able to handle sometimes-poor water quality and stressful living conditions. The list included here are freshwater fish and will provide you with a nice assortment to consider. Cold -Water Fish The most common cold-water fish species is the goldfish but there are many other fish species that do not require a heated tank such as White Cloud Mountain Minnows, Bloodfin Tetras, and Rosy Barbs among others; where their preferred water temperature is between 64 to 72 degrees F. -
ECOLOGY of NORTH AMERICAN FRESHWATER FISHES
ECOLOGY of NORTH AMERICAN FRESHWATER FISHES Tables STEPHEN T. ROSS University of California Press Berkeley Los Angeles London © 2013 by The Regents of the University of California ISBN 978-0-520-24945-5 uucp-ross-book-color.indbcp-ross-book-color.indb 1 44/5/13/5/13 88:34:34 AAMM uucp-ross-book-color.indbcp-ross-book-color.indb 2 44/5/13/5/13 88:34:34 AAMM TABLE 1.1 Families Composing 95% of North American Freshwater Fish Species Ranked by the Number of Native Species Number Cumulative Family of species percent Cyprinidae 297 28 Percidae 186 45 Catostomidae 71 51 Poeciliidae 69 58 Ictaluridae 46 62 Goodeidae 45 66 Atherinopsidae 39 70 Salmonidae 38 74 Cyprinodontidae 35 77 Fundulidae 34 80 Centrarchidae 31 83 Cottidae 30 86 Petromyzontidae 21 88 Cichlidae 16 89 Clupeidae 10 90 Eleotridae 10 91 Acipenseridae 8 92 Osmeridae 6 92 Elassomatidae 6 93 Gobiidae 6 93 Amblyopsidae 6 94 Pimelodidae 6 94 Gasterosteidae 5 95 source: Compiled primarily from Mayden (1992), Nelson et al. (2004), and Miller and Norris (2005). uucp-ross-book-color.indbcp-ross-book-color.indb 3 44/5/13/5/13 88:34:34 AAMM TABLE 3.1 Biogeographic Relationships of Species from a Sample of Fishes from the Ouachita River, Arkansas, at the Confl uence with the Little Missouri River (Ross, pers. observ.) Origin/ Pre- Pleistocene Taxa distribution Source Highland Stoneroller, Campostoma spadiceum 2 Mayden 1987a; Blum et al. 2008; Cashner et al. 2010 Blacktail Shiner, Cyprinella venusta 3 Mayden 1987a Steelcolor Shiner, Cyprinella whipplei 1 Mayden 1987a Redfi n Shiner, Lythrurus umbratilis 4 Mayden 1987a Bigeye Shiner, Notropis boops 1 Wiley and Mayden 1985; Mayden 1987a Bullhead Minnow, Pimephales vigilax 4 Mayden 1987a Mountain Madtom, Noturus eleutherus 2a Mayden 1985, 1987a Creole Darter, Etheostoma collettei 2a Mayden 1985 Orangebelly Darter, Etheostoma radiosum 2a Page 1983; Mayden 1985, 1987a Speckled Darter, Etheostoma stigmaeum 3 Page 1983; Simon 1997 Redspot Darter, Etheostoma artesiae 3 Mayden 1985; Piller et al. -
Spatial Models of Speciation 1.0Cm Modelos Espaciais De Especiação
UNIVERSIDADE ESTADUAL DE CAMPINAS INSTITUTO DE BIOLOGIA CAROLINA LEMES NASCIMENTO COSTA SPATIAL MODELS OF SPECIATION MODELOS ESPACIAIS DE ESPECIAÇÃO CAMPINAS 2019 CAROLINA LEMES NASCIMENTO COSTA SPATIAL MODELS OF SPECIATION MODELOS ESPACIAIS DE ESPECIAÇÃO Thesis presented to the Institute of Biology of the University of Campinas in partial fulfill- ment of the requirements for the degree of Doc- tor in Ecology Tese apresentada ao Instituto de Biologia da Universidade Estadual de Campinas como parte dos requisitos exigidos para a obtenção do título de Doutora em Ecologia Orientador: Marcus Aloizio Martinez de Aguiar ESTE ARQUIVO DIGITAL CORRESPONDE À VERSÃO FINAL DA TESE DEFENDIDA PELA ALUNA CAROLINA LEMES NASCIMENTO COSTA, E ORIENTADA PELO PROF DR. MAR- CUS ALOIZIO MARTINEZ DE AGUIAR. CAMPINAS 2019 Ficha catalográfica Universidade Estadual de Campinas Biblioteca do Instituto de Biologia Mara Janaina de Oliveira - CRB 8/6972 Costa, Carolina Lemes Nascimento, 1989- C823s CosSpatial models of speciation / Carolina Lemes Nascimento Costa. – Campinas, SP : [s.n.], 2019. CosOrientador: Marcus Aloizio Martinez de Aguiar. CosTese (doutorado) – Universidade Estadual de Campinas, Instituto de Biologia. Cos1. Especiação. 2. Radiação adaptativa (Evolução). 3. Modelos biológicos. 4. Padrão espacial. 5. Macroevolução. I. Aguiar, Marcus Aloizio Martinez de, 1960-. II. Universidade Estadual de Campinas. Instituto de Biologia. III. Título. Informações para Biblioteca Digital Título em outro idioma: Modelos espaciais de especiação Palavras-chave em inglês: Speciation Adaptive radiation (Evolution) Biological models Spatial pattern Macroevolution Área de concentração: Ecologia Titulação: Doutora em Ecologia Banca examinadora: Marcus Aloizio Martinez de Aguiar [Orientador] Mathias Mistretta Pires Sabrina Borges Lino Araujo Rodrigo André Caetano Gustavo Burin Ferreira Data de defesa: 25-02-2019 Programa de Pós-Graduação: Ecologia Powered by TCPDF (www.tcpdf.org) Comissão Examinadora: Prof. -
Characterization, Expression Profile, and Promoter Analysis of the Rhodeus Uyekii Vitellogenin Ao1 Gene
Int. J. Mol. Sci. 2014, 15, 18804-18818; doi:10.3390/ijms151018804 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Article Characterization, Expression Profile, and Promoter Analysis of the Rhodeus uyekii Vitellogenin Ao1 Gene Hee Jeong Kong 1, Ju Lan Kim 1, Ji Young Moon 1, Woo-Jin Kim 1, Hyung Soo Kim 1, Jung Youn Park 1, Hyun Kook Cho 2,* and Cheul Min An 1 1 Biotechnology Research Division, National Fisheries Research and Development Institute, Busan 619-705, Korea; E-Mails: [email protected] (H.J.K.); [email protected] (J.L.K.); [email protected] (J.Y.M.); [email protected] (W.-J.K.); [email protected] (H.S.K.); [email protected] (J.Y.P.); [email protected] (C.M.A.) 2 Department of Molecular Biology, Pusan National University, Busan 609-735, Korea * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +82-51-510-3671; Fax: +82-51-513-9258. External Editor: Xiaofeng Jia Received: 21 July 2014; in revised form: 24 September 2014 / Accepted: 11 October 2014 / Published: 17 October 2014 Abstract: The fish Vitellogenin (Vg) gene has been applied as a biomarker for exposure to estrogenic compounds in the aquatic environment. In this study, we cloned and characterized Vg cDNA from the Korean rose bitterling Rhodeus uyekii (Ru-Vg). The Ru-Vg cDNA encodes a 1424-amino-acid polypeptide that belongs to the VgAo1 family and contains a putative signal peptide, lipovitellin I, phosvitin, and lipovitellin II, but does not contain the vWFD domain or the C-terminal peptide. -
LIFE+ Nature & Biodiversity Projects 2012
Nature & Biodiversity LIFE PROJECTS 2012 LIFE Nature Environment Introduction to LIFE+ Nature & Biodiversity 2012 LIFE+ Nature & Biodiversity 2012: Commission funds 92 nature conservation and biodiversity projects in 24 countries with €139.3 million The European Commission has approved funding for 92 new nature conservation and biodiversity projects in 24 countries under the LIFE+ Nature & Biodiversity programme 2012. These projects will tackle a wide range of problems affecting species, habitats and biodiversity in Europe. The projects are led by ‘beneficiaries’, or project promoters, based in Austria, Belgium, Bulgaria, Cyprus, Czech Republic, Denmark, Estonia, Finland, France, Germany, Greece, Hungary, Ireland, Italy, Latvia, Lithuania, Malta, the Netherlands, Poland, Portugal, Slovak Republic, Spain, Sweden and the UK. They represent a total investment of €247.4 million, of which the EU will provide some €139.3 million. LIFE Nature & Biodiversity in 2012 project proposals per year. LIFE+ Nature & Biodiversi- ty is one of three thematic components under the LIFE LIFE+ Nature & Biodiversity projects aim to improve programme. The other two components, LIFE+ Envi- the conservation status of endangered species and ronment Policy & Bio¬diversity and LIFE+ Information habitats. Of the 258 proposals received under the & Communication, focus respectively on supporting 2012 call for proposals, the Commission selected 92 pilot projects that contribute to the development of projects for funding. These projects will be carried innovative policy ideas, technologies, methods and out by partnerships of conservation bodies, govern- instruments; and on disseminating information and ment authorities and other parties located across 24 raising the profile of environmental issues, or provid- Member States. In total, they represent an investment ing training and awareness-raising for the prevention of €247.4 million, of which the EU will provide some of forest fires. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Reproductive Morphology and Sperm Depletion in Crayfish
WORCESTER POLYTECHNIC INSTITUTE Reproductive morphology and sperm depletion in crayfish A Major Qualifying Project submitted to the Faculty of the WORCESTER POLYTECHNIC INSTITUTE in partial fulfillment of the requirements for the Degree of Bachelor of Science by Lauren Pehnke and Aung Pyae 4/26/2012 Acknowledgements There are a number of people to whom we owe our thanks. Firstly, our advisors, Michael Buckholt, Daniel Gibson, and Lauren Mathews, without whose guidance, we would have been lost. Secondly, to the other crayfish ProjectLab groups, for helping us collect some of our specimens from the Quinebaug River in the fall. Lastly, we would like to thank the other groups working in the ProjectLab for their patience and understanding on the matters of keeping live crayfish and the odors inherent to doing so. 1 Abstract Females of the species Orconectes limosus have shown a preference for virgin males over those which had mated recently, when given the choice in prior studies. It was hypothesized that a depletion in sperm stores in the males could be an explanation for this preference. Using conventional methods such as microdissection, resin embedding, and light and electron microscopy, we attempted to show evidence of this depletion and the sperm’s deposition within the female’s spermatheca. 2 Table of Contents Acknowledgements ......................................................................................................................... 1 Abstract .......................................................................................................................................... -
Taxonomic Research of the Gobioid Fishes (Perciformes: Gobioidei) in China
KOREAN JOURNAL OF ICHTHYOLOGY, Vol. 21 Supplement, 63-72, July 2009 Received : April 17, 2009 ISSN: 1225-8598 Revised : June 15, 2009 Accepted : July 13, 2009 Taxonomic Research of the Gobioid Fishes (Perciformes: Gobioidei) in China By Han-Lin Wu, Jun-Sheng Zhong1,* and I-Shiung Chen2 Ichthyological Laboratory, Shanghai Ocean University, 999 Hucheng Ring Rd., 201306 Shanghai, China 1Ichthyological Laboratory, Shanghai Ocean University, 999 Hucheng Ring Rd., 201306 Shanghai, China 2Institute of Marine Biology, National Taiwan Ocean University, Keelung 202, Taiwan ABSTRACT The taxonomic research based on extensive investigations and specimen collections throughout all varieties of freshwater and marine habitats of Chinese waters, including mainland China, Hong Kong and Taiwan, which involved accounting the vast number of collected specimens, data and literature (both within and outside China) were carried out over the last 40 years. There are totally 361 recorded species of gobioid fishes belonging to 113 genera, 5 subfamilies, and 9 families. This gobioid fauna of China comprises 16.2% of 2211 known living gobioid species of the world. This report repre- sents a summary of previous researches on the suborder Gobioidei. A recently diagnosed subfamily, Polyspondylogobiinae, were assigned from the type genus and type species: Polyspondylogobius sinen- sis Kimura & Wu, 1994 which collected around the Pearl River Delta with high extremity of vertebral count up to 52-54. The undated comprehensive checklist of gobioid fishes in China will be provided in this paper. Key words : Gobioid fish, fish taxonomy, species checklist, China, Hong Kong, Taiwan INTRODUCTION benthic perciforms: gobioid fishes to evolve and active- ly radiate. The fishes of suborder Gobioidei belong to the largest The gobioid fishes in China have long received little group of those in present living Perciformes. -
Sexual Selection for Male Dominance Reduces Opportunities for Female Mate Choice in the European Bitterling (Rhodeus Sericeus)
Molecular Ecology (2005) 14, 1533–1542 doi: 10.1111/j.1365-294X.2005.02534.x SexualBlackwell Publishing, Ltd. selection for male dominance reduces opportunities for female mate choice in the European bitterling (Rhodeus sericeus) M. REICHARD,* J. BRYJA,* M. ONDRA3KOVÁ,* M. DÁVIDOVÁ,† P. KANIEWSKA‡ and C. SMITH§ *Institute of Vertebrate Biology, Academy of Sciences of the Czech Republic, Brno, Czech Republic; †Department of Zoology and Ecology, Faculty of Science, Masaryk University, Brno, Czech Republic; ‡Centre for Marine Studies, University of Queensland, Brisbane, Queensland 4072, Australia; §Department of Biology, University of Leicester, University Road, Leicester LE1 7RH, United Kingdom Abstract Sexual selection involves two main mechanisms: intrasexual competition for mates and intersexual mate choice. We experimentally separated intrasexual (male–male interference competition) and intersexual (female choice) components of sexual selection in a freshwater fish, the European bitterling (Rhodeus sericeus). We compared the roles of multiple morphological and behavioural traits in male success in both components of sexual com- petition, and their relation to male reproductive success, measured as paternity of off- spring. Body size was important for both female choice and male–male competition, though females also preferred males that courted more vigorously. However, dominant males often monopolized females regardless of female preference. Subordinate males were not excluded from reproduction and sired some offspring, possibly through sneaked ejaculations. Male dominance and a greater intensity of carotenoid-based red colouration in their iris were the best predictors of male reproductive success. The extent of red iris colouration and parasite load did not have significant effects on female choice, male dominance or male reproductive success. -
Molecular Phylogeography of the Tench
Univerzita Karlova v Praze Přírodovědecká fakulta Katedra zoologie Molekulární fylogeografie lína obecného Tinca tinca (Linnaeus, 1758) Zdeněk Lajbner Disertační práce Školitel: RNDr. Petr Kotlík, Ph.D. ÚŽFG AV ČR, v.v.i., Liběchov Praha 2010 Prohlašuji, že jsem předloženou disertační práci vypracoval samostatně s použitím citované literatury. Dílčí publikace byly zkompletovány společně se jmenovanými spoluautory. Prohlašuji, že jsem nepředložil tuto práci ani žádnou její část k získání jiného nebo stejného akademického titulu. V Praze, 21. prosince 2010 …………..….................... Zdeněk Lajbner Poděkování Na prvním místě děkuji RNDr. Petru Kotlíkovi, Ph.D., z Ústavu živočišné fyziologie a genetiky (ÚŽFG) AV ČR, v.v.i., za trpělivost, kterou se mnou měl již od dob mého magisterského studia a s níž se zhostil i vedení mé práce disertační. Rovněž mu děkuji za všestrannou podporu, jíž se mi z jeho strany dostávalo. Děkuji Prof. Ing. Petru Rábovi, DrSc. a všem kolegům z Laboratoře genetiky ryb ÚŽFG AV ČR, v.v.i., v Liběchově, za vytvoření příjemného pracovního prostředí, trvalý přísun inspirace a cenné rady. V neposlední řadě děkuji spoluautorům publikací i všem dalším lidem, kteří mi během tvorby disertační práce jakkoliv pomohli a to především při shromažďování vzorků línů z celého světa. Velmi rád za trpělivost, s níž tolerovala mé zaneprázdnění, děkuji i mé rodině. Tato práce vznikla za finanční podpory Ministerstva školství mládeže a tělovýchovy České republiky - projekt číslo LC06073 a výzkumných záměrů přidělených Ústavu živočišné fyziologie a genetiky Akademie věd České republiky - projekt číslo AV0Z50450515, Přírodovědecké fakultě Univerzity Karlovy v Praze - projekt číslo 21620828, Fakultě rybářství a ochrany vod Jihočeské Univerzity v Českých Budějovicích - projekt číslo 6007665809 a Interní grantové agentury ÚŽFG AV ČR v.v.i.