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Multiple Polyploidy Events in the Early Radiation of Nodulating And
Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes Steven B. Cannon,*,y,1 Michael R. McKain,y,2,3 Alex Harkess,y,2 Matthew N. Nelson,4,5 Sudhansu Dash,6 Michael K. Deyholos,7 Yanhui Peng,8 Blake Joyce,8 Charles N. Stewart Jr,8 Megan Rolf,3 Toni Kutchan,3 Xuemei Tan,9 Cui Chen,9 Yong Zhang,9 Eric Carpenter,7 Gane Ka-Shu Wong,7,9,10 Jeff J. Doyle,11 and Jim Leebens-Mack2 1USDA-Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 2Department of Plant Biology, University of Georgia 3Donald Danforth Plant Sciences Center, St Louis, MO 4The UWA Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia 5The School of Plant Biology, The University of Western Australia, Crawley, WA, Australia 6Virtual Reality Application Center, Iowa State University 7Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada 8Department of Plant Sciences, The University of Tennessee Downloaded from 9BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China 10Department of Medicine, University of Alberta, Edmonton, AB, Canada 11L. H. Bailey Hortorium, Department of Plant Biology, Cornell University yThese authors contributed equally to this work. *Corresponding author: E-mail: [email protected]. http://mbe.oxfordjournals.org/ Associate editor:BrandonGaut Abstract Unresolved questions about evolution of the large and diverselegumefamilyincludethetiming of polyploidy (whole- genome duplication; WGDs) relative to the origin of the major lineages within the Fabaceae and to the origin of symbiotic nitrogen fixation. Previous work has established that a WGD affects most lineages in the Papilionoideae and occurred sometime after the divergence of the papilionoid and mimosoid clades, but the exact timing has been unknown. -
Evolutionary Tendencies Eclética Química, Vol
Eclética Química ISSN: 0100-4670 [email protected] Universidade Estadual Paulista Júlio de Mesquita Filho Brasil Magalhães, A. F.; Tozzi, A. M. G. A.; Santos, C. C.; Magalhães, E. G. Analysis of metabolites from plants of the Swartzia genus using chemical indexes: evolutionary tendencies Eclética Química, vol. 31, núm. 2, 2006, pp. 13-16 Universidade Estadual Paulista Júlio de Mesquita Filho Araraquara, Brasil Available in: http://www.redalyc.org/articulo.oa?id=42931202 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative www.scielo.br/eq Volume 31, número 2, 2006 Analysis of metabolites from plants of the Swartzia genus using chemical indexes: evolutionary tendencies A. F. Magalhãesa*, A. M. G. A. Tozzib, C. C. Santosa, E. G. Magalhãesa aDepartamento de Química Orgânica, Instituto de Química, UNICAMP, CP 6154, 13084-862 Campinas, SP, Brazil. bDepartamento de Botânica, Instituto de Biologia, UNICAMP, CP 6109, 13083-970 Campinas, SP, Brazil. *E-mail adress: [email protected] Abstract: The chemical indexes, suggested by Gottlieb et al., have not been used before regarding evolutionary tendency of species in the Swartzia genus. However, the importance of this work encour- aged for an analysis of the Swartzia genus using the metabolites isolated from nine species. The analy- sis, based on calculated chemical indexes, provided an evolutionary tendency for these plants, which correlates with the classification based on morphological analysis. Keywords: Swartzia; Leguminosae; plant evolution; chemical index; chemotaxonomy. -
(Verbenaceae) Using Multiple Loci
bs_bs_banner Botanical Journal of the Linnean Society, 2013, 171, 103–119. With 5 figures Investigating the evolution of Lantaneae (Verbenaceae) using multiple loci PATRICIA LU-IRVING* and RICHARD G. OLMSTEAD Department of Biology, University of Washington, Seattle, Washington 98195, USA Received 3 February 2012; revised 29 June 2012; accepted for publication 23 August 2012 Lantaneae are an example of a taxonomically problematic, widespread and recently radiated Neotropical lineage. Taxonomy in Lantaneae is difficult because of complex, overlapping patterns of shifts in morphological traits among members; monophyly of the traditional genera cannot be assumed without additional information from molecular data. We took a multi-locus approach to infer phylogenetic relationships in Lantaneae, resolving major clades among a broad representative sample that covers the morphological, taxonomic and geographical diversity of this group. Data from multiple, independent loci reveal individual gene trees that are incongruent with one another, with varying degrees of support. Without reliable, applicable methods to determine the sources of such incongru- ence and to resolve it, we present the consensus between well-supported topologies among our data sets as the best estimate of Lantaneae phylogeny to date. According to this consensus tree, fleshy fruits in Lantaneae have been derived from dry fruits at least five times; taxonomic schemes separating genera based on fruit characteristics are artificial. Lantaneae have shifted into the Neotropics from the southern temperate subtropics and have colonized Africa in at least two separate long-distance dispersal events. This study provides a first pass at a broad Lantaneae phylogeny, but two important areas remain unresolved: the position of Acantholippia relative to Aloysia; and species-level relationships in the Lantana–Lippia clade. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Ontogenia Floral De Discolobium Pulchellum E Riedeliella Graciliflora (Leguminosae: Papilionoideae: Dalbergieae)
JOÃO PEDRO SILVÉRIO PENA BENTO Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae) Campo Grande – MS Abril – 2020 1 JOÃO PEDRO SILVÉRIO PENA BENTO Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae) Dissertação apresentada ao programa de Pós-Graduação em Biologia Vegetal (PPGBV) da Universidade Federal de Mato Grosso do Sul, como requisito para a obtenção de grau de mestre em Biologia Vegetal Orientadora: Ângela Lúcia Bagnatori Sartori Campo Grande – MS Abril – 2020 2 Ficha Catalográfica Bento, João Pedro Silvério Pena Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae). Dissertação (Mestrado) – Instituto de Biociências da Universidade Federal de Mato Grosso do Sul. 1. Anatomia floral, 2. Clado Pterocarpus, 3. Desenvolvimento floral, 4. Estruturas secretoras, 5. Simetria floral Universidade Federal de Mato Grosso do Sul Instituto de Biociências 3 Agradecimentos À Coordenação de Aperfeiçoamento de Pessoa de Nível Superior (Capes) pela concessão de bolsa de estudo. À minha orientadora Profª. Drª. Ângela Lúcia Bagnatori Sartori, que aceitou a me acompanhar nessa etapa. Agradeço pelas suas correções, por me ensinar como conduzir as pesquisas, por sempre me receber em sua sala mesmo estando ocupada e por seu respeito e carinho de orientadora. À Drª. Elidiene Priscila Seleme Rocha, Drª. Flavia Maria Leme, Profª. Drª. Juliana Villela Paulino, Profª. Drª. Rosani do Carmo de Oliveira Arruda e a Profª. Drª. Viviane Gonçalves Leite, por aceitar compor a minha banca de avaliação final de dissertação. Aos professores que me avaliaram em bancas anteriores e contribuíram para melhorias do projeto. -
Highly Glycosylated Flavonoids from the Pods of Bobgunnia
Tetrahedron Letters 51 (2010) 4727–4730 Contents lists available at ScienceDirect Tetrahedron Letters journal homepage: www.elsevier.com/locate/tetlet Highly glycosylated flavonoids from the pods of Bobgunnia madagascariensis Philip C. Stevenson a,b,*, Stephen P. Nyirenda c, Nigel C. Veitch a a Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK b Natural Resources Institute, University of Greenwich, Chatham Maritime, Kent ME4 4TB, UK c Department of Agricultural Research Services, PO Box 59, Mzuzu, Malawi article info abstract Article history: Methanolic extracts of the pods of Bobgunnia madagascariensis (Leguminosae) yielded four pentaglycosylated Received 19 April 2010 flavonoids, including the 3-O-a-L-rhamnopyranosyl(1?3)-a-L-rhamnopyranosyl(1?2)[a-L-rhamnopyr- Revised 16 June 2010 anosyl(1?6)]-b-D-glucopyranoside-7-O-a-L-rhamnopyranosides of 3,5,7-trihydroxy-2-(4-hydroxyphenyl)- Accepted 2 July 2010 4H-benzopyran-4-one (kaempferol) and 3,5,7-trihydroxy-2-(3,4-dihydroxyphenyl)-4H-benzopyran-4-one Available online 7 July 2010 (quercetin), which were characterized by a novel O-linked branched tetrasaccharide. Spectroscopic and chemical methods were used to determine the structures of the latter, which co-occurred with the Keywords: corresponding b-D-galactopyranosyl isomers, and two saponins. Conformational isomerism of quercetin Bobgunnia 3-O- -L-rhamnopyranosyl(1?3)- -L-rhamnopyranosyl(1?2)[ -L-rhamnopyranosyl(1?6)]-b-D-gluco- Swartzia a a a Tribe Swartzieae pyranoside-7-O-a-L-rhamnopyranoside was detected in solution by NMR, a phenomenon previously Leguminosae associated only with C-glycosylflavonoids. flavonol pentaglycosides Ó 2010 Elsevier Ltd. -
Combined Phylogenetic Analyses Reveal Interfamilial Relationships and Patterns of floral Evolution in the Eudicot Order Fabales
Cladistics Cladistics 1 (2012) 1–29 10.1111/j.1096-0031.2012.00392.x Combined phylogenetic analyses reveal interfamilial relationships and patterns of floral evolution in the eudicot order Fabales M. Ange´ lica Belloa,b,c,*, Paula J. Rudallb and Julie A. Hawkinsa aSchool of Biological Sciences, Lyle Tower, the University of Reading, Reading, Berkshire RG6 6BX, UK; bJodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK; cReal Jardı´n Bota´nico-CSIC, Plaza de Murillo 2, CP 28014 Madrid, Spain Accepted 5 January 2012 Abstract Relationships between the four families placed in the angiosperm order Fabales (Leguminosae, Polygalaceae, Quillajaceae, Surianaceae) were hitherto poorly resolved. We combine published molecular data for the chloroplast regions matK and rbcL with 66 morphological characters surveyed for 73 ingroup and two outgroup species, and use Parsimony and Bayesian approaches to explore matrices with different missing data. All combined analyses using Parsimony recovered the topology Polygalaceae (Leguminosae (Quillajaceae + Surianaceae)). Bayesian analyses with matched morphological and molecular sampling recover the same topology, but analyses based on other data recover a different Bayesian topology: ((Polygalaceae + Leguminosae) (Quillajaceae + Surianaceae)). We explore the evolution of floral characters in the context of the more consistent topology: Polygalaceae (Leguminosae (Quillajaceae + Surianaceae)). This reveals synapomorphies for (Leguminosae (Quillajaceae + Suri- anaceae)) as the presence of free filaments and marginal ⁄ ventral placentation, for (Quillajaceae + Surianaceae) as pentamery and apocarpy, and for Leguminosae the presence of an abaxial median sepal and unicarpellate gynoecium. An octamerous androecium is synapomorphic for Polygalaceae. The development of papilionate flowers, and the evolutionary context in which these phenotypes appeared in Leguminosae and Polygalaceae, shows that the morphologies are convergent rather than synapomorphic within Fabales. -
Floristic Composition and Edge-Induced Homogenization in Tree Communities in the Fragmented Atlantic Rainforest of Rio De Janeiro, Brazil
Mongabay.com Open Access Journal - Tropical Conservation Science Vol. 9 (2): 852-876, 2016 Research Article Floristic composition and edge-induced homogenization in tree communities in the fragmented Atlantic rainforest of Rio de Janeiro, Brazil. Oliver Thier1* and Jens Wesenberg2 1 University of Leipzig, Institute for Biology I, Systematic Botany and Functional Biodiversity, Johannisallee 21, 04103 Leipzig, Germany. 2 Senckenberg Museum of Natural History Görlitz, Botany Department, Am Museum 1, 02826 Görlitz, Germany. * Corresponding author. Email: [email protected] Abstract This study investigates the changes of tree species composition and diversity along the gradient from fragment edge to interior, and between edge and interior habitats, on a regional scale, in nine Atlantic forest fragments (6–120 ha), in southeastern Brazil. A total of 1980 trees (dbh ≥ 5 cm) comprising 252 species, 156 genera and 57 families were surveyed using the point-centered quarter method. From the fragment edge towards the interior the proportion of shade-tolerant trees increased continuously. The majority of all trees within the first 100 m from the edge belonged to the pioneer-guild. Floristic dissimilarity was found to be higher among interior habitats of different fragments than among the corresponding edge areas or among different small fragments. Species diversity increased along the edge-interior gradient 1.5 times within the first 250 m. Our results support previous findings that the establishment of edge-affected habitats leads to tree species impoverishment and homogenization via the dominance and proliferation of pioneer species in the forest edges of severely fragmented tropical landscapes. We argue that conservation strategies which include the creation of buffer zones between forest edges and the matrix will be more efficient than the establishment of narrow corridors to connect fragments and protected areas. -
Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes
SAJB-00941; No of Pages 18 South African Journal of Botany xxx (2013) xxx–xxx Contents lists available at SciVerse ScienceDirect South African Journal of Botany journal homepage: www.elsevier.com/locate/sajb Reconstructing the deep-branching relationships of the papilionoid legumes D. Cardoso a,⁎, R.T. Pennington b, L.P. de Queiroz a, J.S. Boatwright c, B.-E. Van Wyk d, M.F. Wojciechowski e, M. Lavin f a Herbário da Universidade Estadual de Feira de Santana (HUEFS), Av. Transnordestina, s/n, Novo Horizonte, 44036-900 Feira de Santana, Bahia, Brazil b Royal Botanic Garden Edinburgh, 20A Inverleith Row, EH5 3LR Edinburgh, UK c Department of Biodiversity and Conservation Biology, University of the Western Cape, Modderdam Road, \ Bellville, South Africa d Department of Botany and Plant Biotechnology, University of Johannesburg, P. O. Box 524, 2006 Auckland Park, Johannesburg, South Africa e School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA f Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA article info abstract Available online xxxx Resolving the phylogenetic relationships of the deep nodes of papilionoid legumes (Papilionoideae) is essential to understanding the evolutionary history and diversification of this economically and ecologically important legume Edited by J Van Staden subfamily. The early-branching papilionoids include mostly Neotropical trees traditionally circumscribed in the tribes Sophoreae and Swartzieae. They are more highly diverse in floral morphology than other groups of Keywords: Papilionoideae. For many years, phylogenetic analyses of the Papilionoideae could not clearly resolve the relation- Leguminosae ships of the early-branching lineages due to limited sampling. -
Precious Woods Background Paper 1
Chatham House Workshop: Tackling the Trade in Illegal Precious Woods 23-24 April 2012 Background Paper 1: Precious Woods: Exploitation of the Finest Timber Prepared by TRAFFIC Authors: Section 1: Anna Jenkins, Neil Bridgland, Rachel Hembery & Ulrich Malessa Section 2: James Hewitt, Ulrich Malessa & Chen Hin Keong This review was commissioned from TRAFFIC by The Royal Institute of International Affairs (Chatham House), London UK. TRAFFIC supervised the elaboration of the review with support of Ethical Change Ltd, Llanidloes UK. The review was developed as one of three studies to explore the social and ecological impacts of trade, related exporting and importing country regulations as well as to develop recommendations to reduce the negative impacts of trade in precious woods species. Contact details of lead authors and supervisor: Section 1 & Appendices Anna Jenkins Ethical Change Ltd Tryfan, Llanidloes, SY18 6HU, Wales, UK [email protected] Section 2 James Hewitt [email protected] Section 1 & 2 (technical supervisor) Ulrich Malessa TRAFFIC WWF US 1250 24 th ST NW, Washington, DC 20037, USA [email protected] 2 Contents Contents ............................................................................................................................................................................................. 3 Acknowledgments ....................................................................................................................................................................... 4 Section 1 ............................................................................................................................................................................................ -
Lowland Vegetation of Tropical South America -- an Overview
Lowland Vegetation of Tropical South America -- An Overview Douglas C. Daly John D. Mitchell The New York Botanical Garden [modified from this reference:] Daly, D. C. & J. D. Mitchell 2000. Lowland vegetation of tropical South America -- an overview. Pages 391-454. In: D. Lentz, ed. Imperfect Balance: Landscape Transformations in the pre-Columbian Americas. Columbia University Press, New York. 1 Contents Introduction Observations on vegetation classification Folk classifications Humid forests Introduction Structure Conditions that suppport moist forests Formations and how to define them Inclusions and archipelagos Trends and patterns of diversity in humid forests Transitions Floodplain forests River types Other inundated forests Phytochoria: Chocó Magdalena/NW Caribbean Coast (mosaic type) Venezuelan Guayana/Guayana Highland Guianas-Eastern Amazonia Amazonia (remainder) Southern Amazonia Transitions Atlantic Forest Complex Tropical Dry Forests Introduction Phytochoria: Coastal Cordillera of Venezuela Caatinga Chaco Chaquenian vegetation Non-Chaquenian vegetation Transitional vegetation Southern Brazilian Region Savannas Introduction Phytochoria: Cerrado Llanos of Venezuela and Colombia Roraima-Rupununi savanna region Llanos de Moxos (mosaic type) Pantanal (mosaic type) 2 Campo rupestre Conclusions Acknowledgments Literature Cited 3 Introduction Tropical lowland South America boasts a diversity of vegetation cover as impressive -- and often as bewildering -- as its diversity of plant species. In this chapter, we attempt to describe the major types of vegetation cover in this vast region as they occurred in pre- Columbian times and outline the conditions that support them. Examining the large-scale phytogeographic regions characterized by each major cover type (see Fig. I), we provide basic information on geology, geological history, topography, and climate; describe variants of physiognomy (vegetation structure) and geography; discuss transitions; and examine some floristic patterns and affinities within and among these regions. -
Antimicrobial Activity of Neotropical Wood and Bark Extracts
Pharmaceutical Biology 1388-0209/99/3703-0208$15.00 1999, Vol. 37, NO. 3, pp. 208-215 O Swets & Zeitlinger ANTIMICROBIALACTIVITY OF NEOTROPICALWOOD AND BARKEXTRACTS Ivelisse Roviral, Amy Berkovl, Ainsley Parkinson1, Scott Mori3 and Barbara Meurer-Grimes1 lDepartment of Biological Sciences, Lehman College and The Graduate School of the City University of New York, 250 Bedford Park Boulevard West, Bronx, New York 10468, U.S.A. 21nstitut Français de Recherche Scientifique pour le Développement en Coopération (ORSTOM), Laboratoire d’Entomologie forestière, Centre de Cayenne, B. P. 165,97323 Cayenne Cedex, France 31nstitute of Systematic Botany, The New York Botanical Garden, Bronx, New York 10458, U.S.A. ABSTRACT INTRODUCTION A total of 203 wood and bark extracts obtaiiiedfiom a The tree species of the lowland Neotropical rainforests Neotropical lowland rainforest in French Guiana were in northem South America constitute a vast natural and tested for antimicrobial activity against a panel offour economic resource of our planet. Waterman and huinaii pathogens. Iïihibitoiy activity against Staphy- lococcus aureus was regularly obsewed. Significant McKey (1983) propose that the bark might actually be growth inhibition against Enterococcus faecilis was the ‘most defended part of a tropical tree’. Medicinal found in species belonging to the plant genus Sloanea uses of various woods and, especially, of barks have (Elaeocaipaceae) and various Sapotaceae. ílie plant been reported from many cultures that live in close con- genera Eschweilera, Gustavia and Couratai (Lecythi- daceae) showed notable growth iiihibitory activity tact with these forests. Grenand et al. (1987) mention against both Escherichia coli aiid Enterococcus fae- hundreds of ethnomedicinal applications of bark and cilis.