Contrasting Plant Diversification Histories Within the Andean
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Multiple Polyploidy Events in the Early Radiation of Nodulating And
Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes Steven B. Cannon,*,y,1 Michael R. McKain,y,2,3 Alex Harkess,y,2 Matthew N. Nelson,4,5 Sudhansu Dash,6 Michael K. Deyholos,7 Yanhui Peng,8 Blake Joyce,8 Charles N. Stewart Jr,8 Megan Rolf,3 Toni Kutchan,3 Xuemei Tan,9 Cui Chen,9 Yong Zhang,9 Eric Carpenter,7 Gane Ka-Shu Wong,7,9,10 Jeff J. Doyle,11 and Jim Leebens-Mack2 1USDA-Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 2Department of Plant Biology, University of Georgia 3Donald Danforth Plant Sciences Center, St Louis, MO 4The UWA Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia 5The School of Plant Biology, The University of Western Australia, Crawley, WA, Australia 6Virtual Reality Application Center, Iowa State University 7Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada 8Department of Plant Sciences, The University of Tennessee Downloaded from 9BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China 10Department of Medicine, University of Alberta, Edmonton, AB, Canada 11L. H. Bailey Hortorium, Department of Plant Biology, Cornell University yThese authors contributed equally to this work. *Corresponding author: E-mail: [email protected]. http://mbe.oxfordjournals.org/ Associate editor:BrandonGaut Abstract Unresolved questions about evolution of the large and diverselegumefamilyincludethetiming of polyploidy (whole- genome duplication; WGDs) relative to the origin of the major lineages within the Fabaceae and to the origin of symbiotic nitrogen fixation. Previous work has established that a WGD affects most lineages in the Papilionoideae and occurred sometime after the divergence of the papilionoid and mimosoid clades, but the exact timing has been unknown. -
Evolutionary Tendencies Eclética Química, Vol
Eclética Química ISSN: 0100-4670 [email protected] Universidade Estadual Paulista Júlio de Mesquita Filho Brasil Magalhães, A. F.; Tozzi, A. M. G. A.; Santos, C. C.; Magalhães, E. G. Analysis of metabolites from plants of the Swartzia genus using chemical indexes: evolutionary tendencies Eclética Química, vol. 31, núm. 2, 2006, pp. 13-16 Universidade Estadual Paulista Júlio de Mesquita Filho Araraquara, Brasil Available in: http://www.redalyc.org/articulo.oa?id=42931202 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative www.scielo.br/eq Volume 31, número 2, 2006 Analysis of metabolites from plants of the Swartzia genus using chemical indexes: evolutionary tendencies A. F. Magalhãesa*, A. M. G. A. Tozzib, C. C. Santosa, E. G. Magalhãesa aDepartamento de Química Orgânica, Instituto de Química, UNICAMP, CP 6154, 13084-862 Campinas, SP, Brazil. bDepartamento de Botânica, Instituto de Biologia, UNICAMP, CP 6109, 13083-970 Campinas, SP, Brazil. *E-mail adress: [email protected] Abstract: The chemical indexes, suggested by Gottlieb et al., have not been used before regarding evolutionary tendency of species in the Swartzia genus. However, the importance of this work encour- aged for an analysis of the Swartzia genus using the metabolites isolated from nine species. The analy- sis, based on calculated chemical indexes, provided an evolutionary tendency for these plants, which correlates with the classification based on morphological analysis. Keywords: Swartzia; Leguminosae; plant evolution; chemical index; chemotaxonomy. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Ontogenia Floral De Discolobium Pulchellum E Riedeliella Graciliflora (Leguminosae: Papilionoideae: Dalbergieae)
JOÃO PEDRO SILVÉRIO PENA BENTO Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae) Campo Grande – MS Abril – 2020 1 JOÃO PEDRO SILVÉRIO PENA BENTO Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae) Dissertação apresentada ao programa de Pós-Graduação em Biologia Vegetal (PPGBV) da Universidade Federal de Mato Grosso do Sul, como requisito para a obtenção de grau de mestre em Biologia Vegetal Orientadora: Ângela Lúcia Bagnatori Sartori Campo Grande – MS Abril – 2020 2 Ficha Catalográfica Bento, João Pedro Silvério Pena Papilionada Versus Não Papilionada: Ontogenia floral de Discolobium pulchellum e Riedeliella graciliflora (Leguminosae: Papilionoideae: Dalbergieae). Dissertação (Mestrado) – Instituto de Biociências da Universidade Federal de Mato Grosso do Sul. 1. Anatomia floral, 2. Clado Pterocarpus, 3. Desenvolvimento floral, 4. Estruturas secretoras, 5. Simetria floral Universidade Federal de Mato Grosso do Sul Instituto de Biociências 3 Agradecimentos À Coordenação de Aperfeiçoamento de Pessoa de Nível Superior (Capes) pela concessão de bolsa de estudo. À minha orientadora Profª. Drª. Ângela Lúcia Bagnatori Sartori, que aceitou a me acompanhar nessa etapa. Agradeço pelas suas correções, por me ensinar como conduzir as pesquisas, por sempre me receber em sua sala mesmo estando ocupada e por seu respeito e carinho de orientadora. À Drª. Elidiene Priscila Seleme Rocha, Drª. Flavia Maria Leme, Profª. Drª. Juliana Villela Paulino, Profª. Drª. Rosani do Carmo de Oliveira Arruda e a Profª. Drª. Viviane Gonçalves Leite, por aceitar compor a minha banca de avaliação final de dissertação. Aos professores que me avaliaram em bancas anteriores e contribuíram para melhorias do projeto. -
Highly Glycosylated Flavonoids from the Pods of Bobgunnia
Tetrahedron Letters 51 (2010) 4727–4730 Contents lists available at ScienceDirect Tetrahedron Letters journal homepage: www.elsevier.com/locate/tetlet Highly glycosylated flavonoids from the pods of Bobgunnia madagascariensis Philip C. Stevenson a,b,*, Stephen P. Nyirenda c, Nigel C. Veitch a a Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK b Natural Resources Institute, University of Greenwich, Chatham Maritime, Kent ME4 4TB, UK c Department of Agricultural Research Services, PO Box 59, Mzuzu, Malawi article info abstract Article history: Methanolic extracts of the pods of Bobgunnia madagascariensis (Leguminosae) yielded four pentaglycosylated Received 19 April 2010 flavonoids, including the 3-O-a-L-rhamnopyranosyl(1?3)-a-L-rhamnopyranosyl(1?2)[a-L-rhamnopyr- Revised 16 June 2010 anosyl(1?6)]-b-D-glucopyranoside-7-O-a-L-rhamnopyranosides of 3,5,7-trihydroxy-2-(4-hydroxyphenyl)- Accepted 2 July 2010 4H-benzopyran-4-one (kaempferol) and 3,5,7-trihydroxy-2-(3,4-dihydroxyphenyl)-4H-benzopyran-4-one Available online 7 July 2010 (quercetin), which were characterized by a novel O-linked branched tetrasaccharide. Spectroscopic and chemical methods were used to determine the structures of the latter, which co-occurred with the Keywords: corresponding b-D-galactopyranosyl isomers, and two saponins. Conformational isomerism of quercetin Bobgunnia 3-O- -L-rhamnopyranosyl(1?3)- -L-rhamnopyranosyl(1?2)[ -L-rhamnopyranosyl(1?6)]-b-D-gluco- Swartzia a a a Tribe Swartzieae pyranoside-7-O-a-L-rhamnopyranoside was detected in solution by NMR, a phenomenon previously Leguminosae associated only with C-glycosylflavonoids. flavonol pentaglycosides Ó 2010 Elsevier Ltd. -
Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes
SAJB-00941; No of Pages 18 South African Journal of Botany xxx (2013) xxx–xxx Contents lists available at SciVerse ScienceDirect South African Journal of Botany journal homepage: www.elsevier.com/locate/sajb Reconstructing the deep-branching relationships of the papilionoid legumes D. Cardoso a,⁎, R.T. Pennington b, L.P. de Queiroz a, J.S. Boatwright c, B.-E. Van Wyk d, M.F. Wojciechowski e, M. Lavin f a Herbário da Universidade Estadual de Feira de Santana (HUEFS), Av. Transnordestina, s/n, Novo Horizonte, 44036-900 Feira de Santana, Bahia, Brazil b Royal Botanic Garden Edinburgh, 20A Inverleith Row, EH5 3LR Edinburgh, UK c Department of Biodiversity and Conservation Biology, University of the Western Cape, Modderdam Road, \ Bellville, South Africa d Department of Botany and Plant Biotechnology, University of Johannesburg, P. O. Box 524, 2006 Auckland Park, Johannesburg, South Africa e School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA f Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA article info abstract Available online xxxx Resolving the phylogenetic relationships of the deep nodes of papilionoid legumes (Papilionoideae) is essential to understanding the evolutionary history and diversification of this economically and ecologically important legume Edited by J Van Staden subfamily. The early-branching papilionoids include mostly Neotropical trees traditionally circumscribed in the tribes Sophoreae and Swartzieae. They are more highly diverse in floral morphology than other groups of Keywords: Papilionoideae. For many years, phylogenetic analyses of the Papilionoideae could not clearly resolve the relation- Leguminosae ships of the early-branching lineages due to limited sampling. -
Filling in the Gaps of the Papilionoid Legume
Molecular Phylogenetics and Evolution 84 (2015) 112–124 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Filling in the gaps of the papilionoid legume phylogeny: The enigmatic Amazonian genus Petaladenium is a new branch of the early-diverging Amburaneae clade ⇑ Domingos Cardoso a,b, , Wallace M.B. São-Mateus b, Daiane Trabuco da Cruz b, Charles E. Zartman c, Dirce L. Komura c, Geoffrey Kite d, Gerhard Prenner d, Jan J. Wieringa e, Alexandra Clark f, Gwilym Lewis g, R. Toby Pennington f, Luciano Paganucci de Queiroz b a Departamento de Botânica, Instituto de Biologia, Universidade Federal da Bahia, Rua Barão de Geremoabo, s/n, Campus Universitário de Ondina, 40170-115 Salvador, Bahia, Brazil b Programa de Pós-Graduação em Botânica (PPGBot), Universidade Estadual de Feira de Santana, Av. Transnordestina, s/n, Novo Horizonte, 44036-900 Feira de Santana, Bahia, Brazil c Instituto Nacional de Pesquisas da Amazônia (INPA), Department of Biodiversity, Av. André Araújo, 2936, Petrópolis, 69060-001 Manaus, Amazonas, Brazil d Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK e Naturalis Biodiversity Centre, Botany Section, Darwinweg 2, 2333 CR Leiden, The Netherlands f Tropical Diversity Section, Royal Botanic Garden Edinburgh, 20A Inverleith Row, Edinburgh EH5 3LR, UK g Herbarium, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK article info abstract Article history: Recent deep-level phylogenies of the basal papilionoid legumes (Leguminosae, Papilionoideae) have Received 12 September 2014 resolved many clades, yet left the phylogenetic placement of several genera unassessed. The phylogenet- Revised 20 December 2014 ically enigmatic Amazonian monospecific genus Petaladenium had been believed to be close to the genera Accepted 27 December 2014 of the Genistoid Ormosieae clade. -
Wojciechowski Quark
Wojciechowski, M.F. (2003). Reconstructing the phylogeny of legumes (Leguminosae): an early 21st century perspective In: B.B. Klitgaard and A. Bruneau (editors). Advances in Legume Systematics, part 10, Higher Level Systematics, pp. 5–35. Royal Botanic Gardens, Kew. RECONSTRUCTING THE PHYLOGENY OF LEGUMES (LEGUMINOSAE): AN EARLY 21ST CENTURY PERSPECTIVE MARTIN F. WOJCIECHOWSKI Department of Plant Biology, Arizona State University, Tempe, Arizona 85287 USA Abstract Elucidating the phylogenetic relationships of the legumes is essential for understanding the evolutionary history of events that underlie the origin and diversification of this family of ecologically and economically important flowering plants. In the ten years since the Third International Legume Conference (1992), the study of legume phylogeny using molecular data has advanced from a few tentative inferences based on relatively few, small datasets into an era of large, increasingly multiple gene analyses that provide greater resolution and confidence, as well as a few surprises. Reconstructing the phylogeny of the Leguminosae and its close relatives will further advance our knowledge of legume biology and facilitate comparative studies of plant structure and development, plant-animal interactions, plant-microbial symbiosis, and genome structure and dynamics. Phylogenetic relationships of Leguminosae — what has been accomplished since ILC-3? The Leguminosae (Fabaceae), with approximately 720 genera and more than 18,000 species worldwide (Lewis et al., in press) is the third largest family of flowering plants (Mabberley, 1997). Although greater in terms of the diversity of forms and number of habitats in which they reside, the family is second only perhaps to Poaceae (the grasses) in its agricultural and economic importance, and includes species used for foods, oils, fibre, fuel, timber, medicinals, numerous chemicals, cultivated horticultural varieties, and soil enrichment. -
Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes
Cardoso, D. et al. (2013). Reconstructing the deep-braching relationships of the papilionoid legumes. South African Journal of Botany. 89: 58-75 https://dx.doi.org/10.1016/j.sajb.2013.05.001 Reconstructing the deep-branching relationships of the papilionoid legumes D. Cardoso, R.T. Pennington, L.P. de Queiroz, J.S. Boatwright, B.-E. Van Wyk, M.F. Wojciechowski and M. Lavin Abstract Resolving the phylogenetic relationships of the deep nodes of papilionoid legumes (Papilionoideae) is essential to understanding the evolutionary history and diversification of this economically and ecologically important legume subfamily. The early-branching papilionoids include mostly Neotropical trees traditionally circumscribed in the tribes Sophoreae and Swartzieae. They are more highly diverse in floral morphology than other groups of Papilionoideae. For many years, phylogenetic analyses of the Papilionoideae could not clearly resolve the relation- ships of the early-branching lineages due to limited sampling. In the eight years since the publication of Legumes of the World, we have seen an extraordinary wealth of new molecular data for the study of Papilionoideae phylogeny, enabling increasingly greater resolution and many surprises. This study draws on recent molecular phylogenetic studies and a new comprehensive Bayesian phylogenetic analysis of 668 plastid matK sequences. The present matK phylogeny resolves the deep-branching relationships of the papilionoids with increased support for many clades, and suggests that taxonomic realignments of some genera and of numerous tribes are necessary. The potentially earliest-branching papilionoids fall within an ADA clade, which includes the recircumscribed monophyletic tribes Angylocalyceae, Dipterygeae, and Amburanae. The genera Aldina and Amphimas represent two of the nine main but as yet unresolved lineages comprising the large 50-kb inversion clade. -
The Distinct Plastid Genome Structure of Maackia Fauriei (Fabaceae: Papilionoideae) and Its Systematic Implications for Genistoids and Tribe Sophoreae
RESEARCH ARTICLE The distinct plastid genome structure of Maackia fauriei (Fabaceae: Papilionoideae) and its systematic implications for genistoids and tribe Sophoreae In-Su Choi, Byoung-Hee Choi* Department of Biological Sciences, Inha University, Incheon, Republic of Korea * [email protected] a1111111111 a1111111111 a1111111111 Abstract a1111111111 Traditionally, the tribe Sophoreae sensu lato has been considered a basal but also hetero- a1111111111 geneous taxonomic group of the papilionoid legumes. Phylogenetic studies have placed Sophoreae sensu stricto (s.s.) as a member of the core genistoids. The recently suggested new circumscription of this tribe involved the removal of traditional members and the inclu- sion of Euchresteae and Thermopsideae. Nonetheless, definitions and inter- and intra-taxo- OPEN ACCESS nomic issues of Sophoreae remain unclear. Within the field of legume systematics, the Citation: Choi I-S, Choi B-H (2017) The distinct molecular characteristics of a plastid genome (plastome) have an important role in helping plastid genome structure of Maackia fauriei to define taxonomic groups. Here, we examined the plastome of Maackia fauriei, belonging (Fabaceae: Papilionoideae) and its systematic implications for genistoids and tribe Sophoreae. to Sophoreae s.s., to elucidate the molecular characteristics of Sophoreae. Its gene con- PLoS ONE 12(4): e0173766. https://doi.org/ tents are similar to the plastomes of other typical legumes. Putative pseudogene rps16 of 10.1371/journal.pone.0173766 Maackia and Lupinus species imply independent functional gene loss from the genistoids. Editor: Giovanni G Vendramin, Consiglio Nazionale Our overall examination of that loss among legumes suggests that it is common among all delle Ricerche, ITALY major clades of Papilionoideae. -
Redalyc.CHEMICAL INDEXES CALCULATED for 8,11,13
Eclética Química ISSN: 0100-4670 [email protected] Universidade Estadual Paulista Júlio de Mesquita Filho Brasil Magalhães, A. F.; Tozzi, A. M. G. A.; Santos, C. C.; Magalhães, E. G. CHEMICAL INDEXES CALCULATED FOR 8,11,13-TRIENABIETANE DITERPENOIDS ISOLATED FROM SWARTZIA SPECIES Eclética Química, vol. 35, núm. 3, 2010, pp. 169-177 Universidade Estadual Paulista Júlio de Mesquita Filho Araraquara, Brasil Available in: http://www.redalyc.org/articulo.oa?id=42915812017 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative ECLÉTICA www.scielo.br/eq química Volume 35, número 3, 2010 Artigo/Article CHEMICAL INDEXES CALCULATED FOR 8,11,13-TRIEN- ABIETANE DITERPENOIDS ISOLATED FROM SWARTZIA SPECIES A. F. Magalhães a*; A. M. G. A. Tozzi b; C. C. Santos a; E. G. Magalhães a. a University of Campinas, UNICAMP, Institute of Chemistry, P. O. Box 6154, 13083-970, Campinas, SP, Brazil b University of Campinas, UNICAMP, Institute of Biology, P. O. Box 6109, 13083-970, Campinas, SP, Brazil aCorrespondence to: Aderbal F. Magalhães. E-mail adress: [email protected] Abstract: The disparity found in the molecular structures of compounds isolated from nine plants of the Swartzia genus indicates that the Swartzia species that furnished cassane diter- penoids and triterpenoidal saponins are more recent, since these metabolites have adopted the mevalonic acid route of formation, abandoning the shikimic acid/acetate route that produces the isoflavonoids found in the remaining species. -
Eclética Química 35-3.Indd
ECLÉTICA www.scielo.br/eq química Volume 35, número 3, 2010 Artigo/Article CHEMICAL INDEXES CALCULATED FOR 8,11,13-TRIEN- ABIETANE DITERPENOIDS ISOLATED FROM SWARTZIA SPECIES A. F. Magalhães a*; A. M. G. A. Tozzi b; C. C. Santos a; E. G. Magalhães a. a University of Campinas, UNICAMP, Institute of Chemistry, P. O. Box 6154, 13083-970, Campinas, SP, Brazil b University of Campinas, UNICAMP, Institute of Biology, P. O. Box 6109, 13083-970, Campinas, SP, Brazil aCorrespondence to: Aderbal F. Magalhães. E-mail adress: [email protected] Abstract: The disparity found in the molecular structures of compounds isolated from nine plants of the Swartzia genus indicates that the Swartzia species that furnished cassane diter- penoids and triterpenoidal saponins are more recent, since these metabolites have adopted the mevalonic acid route of formation, abandoning the shikimic acid/acetate route that produces the isoflavonoids found in the remaining species. Chemical indexes calculated from the mole- cular structure diversities of sixteen 8,11,13-trien-abietane diterpenoids isolated from Swartzia langsdorffii and S. arborescens indicate that S. arborescens is more recent than S. langsdorffii. The results suggest a more evolved position in Swartzia species of the section Possira. Keywords: Leguminosae, Systematics of Swartzia genus, plant evolution, chemical index, chemotaxonomy. Introduction common ancestry. Indeed, a systematic study of Swartzia, based on morphological and molecular The genus Swartzia Schreb. belongs to tri- characters, could provide an evolutionary basis to be Swartzieae, subfamily Papilionoideae (Faboi- evaluate the infrageneric taxonomy of Cowan [2]. deae) of the Leguminosae (Fabaceae), and con- Recently, it was pointed out [11] that sists of about 180 species distributed in tropical Swartzia should be retained without further divi- America [1].