A Non-Native Bryozoan Creates Novel Substrate on the Mudflats in San Francisco Bay
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Part I. an Annotated Checklist of Extant Brachyuran Crabs of the World
THE RAFFLES BULLETIN OF ZOOLOGY 2008 17: 1–286 Date of Publication: 31 Jan.2008 © National University of Singapore SYSTEMA BRACHYURORUM: PART I. AN ANNOTATED CHECKLIST OF EXTANT BRACHYURAN CRABS OF THE WORLD Peter K. L. Ng Raffles Museum of Biodiversity Research, Department of Biological Sciences, National University of Singapore, Kent Ridge, Singapore 119260, Republic of Singapore Email: [email protected] Danièle Guinot Muséum national d'Histoire naturelle, Département Milieux et peuplements aquatiques, 61 rue Buffon, 75005 Paris, France Email: [email protected] Peter J. F. Davie Queensland Museum, PO Box 3300, South Brisbane, Queensland, Australia Email: [email protected] ABSTRACT. – An annotated checklist of the extant brachyuran crabs of the world is presented for the first time. Over 10,500 names are treated including 6,793 valid species and subspecies (with 1,907 primary synonyms), 1,271 genera and subgenera (with 393 primary synonyms), 93 families and 38 superfamilies. Nomenclatural and taxonomic problems are reviewed in detail, and many resolved. Detailed notes and references are provided where necessary. The constitution of a large number of families and superfamilies is discussed in detail, with the positions of some taxa rearranged in an attempt to form a stable base for future taxonomic studies. This is the first time the nomenclature of any large group of decapod crustaceans has been examined in such detail. KEY WORDS. – Annotated checklist, crabs of the world, Brachyura, systematics, nomenclature. CONTENTS Preamble .................................................................................. 3 Family Cymonomidae .......................................... 32 Caveats and acknowledgements ............................................... 5 Family Phyllotymolinidae .................................... 32 Introduction .............................................................................. 6 Superfamily DROMIOIDEA ..................................... 33 The higher classification of the Brachyura ........................ -
Larval Morphology of the Spider Crab Leurocyclus Tuberculosus (Decapoda: Majoidea: Inachoididae)
Nauplius 17(1): 49-58, 2009 49 Larval morphology of the spider crab Leurocyclus tuberculosus (Decapoda: Majoidea: Inachoididae) William Santana and Fernando Marques (WS) Museu de Zoologia, Universidade de São Paulo, Avenida Nazaré, 481, Ipiranga, 04263-000, São Paulo, SP, Brasil. E-mail: [email protected] (FM) Universidade de São Paulo, Departamento de Zoologia, Instituto de Biociências, Caixa Postal 11461, 05588-090, São Paulo, SP, Brasil. E-mail: [email protected] Abstract Within the recently resurrected family Inachoididae is Leurocyclus tuberculosus, an inachoidid spider crab distributed throughout the Western Atlantic of South America from Brazil to Argentina (including Patagonia), and along the Eastern Pacific coast of Chile. The larval development of L. tuberculosus consists of two zoeal stages and one megalopa. We observed that the larval morphology of L. tuberculosus conforms to the general pattern found in Majoidea by having two zoeal stages, in which the first stage has nine or more seta on the scaphognatite of the maxilla, and the second zoeal stage present well developed pleopods. Here, we describe the larval morphology of L. tuberculosus and compare with other inachoidid members for which we have larval information. Key words: Larval development, Majidae, Zoeal stages, Megalopa, Crustacea, Leurocyclus. Introduction described. Larval stages of Anasimus latus Rath- bun, 1894 was the first one to be described by Few decades ago, the family Inachoididae Sandifer and Van Engel (1972). Following, Web- Dana, 1851 was resurrected by Drach and Gui- ber and Wear (1981) and Terada (1983) described not (1983; see also Drach and Guinot, 1982), the first zoeal stage of Pyromaia tuberculata (Lock- who considered that the morphological modifica- ington, 1877), which was completely described tions on the carapace and endophragmal skeleton by Fransozo and Negreiros-Fransozo (1997) and among some majoid genera granted to a set of re-described by Luppi and Spivak (2003). -
Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight
Georgia Southern University Digital Commons@Georgia Southern Electronic Theses and Dissertations Graduate Studies, Jack N. Averitt College of Fall 2005 Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight Richard Robert Ruzicka Follow this and additional works at: https://digitalcommons.georgiasouthern.edu/etd Recommended Citation Ruzicka, Richard Robert, "Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight" (2005). Electronic Theses and Dissertations. 705. https://digitalcommons.georgiasouthern.edu/etd/705 This thesis (open access) is brought to you for free and open access by the Graduate Studies, Jack N. Averitt College of at Digital Commons@Georgia Southern. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Digital Commons@Georgia Southern. For more information, please contact [email protected]. SPONGE COMMUNITY STRUCTURE AND ANTI-PREDATOR DEFENSES ON TEMPERATES REEFS OF THE SOUTH ATLANTIC BIGHT by RICHARD ROBERT RUZICKA III Under the Direction of Daniel F. Gleason ABSTRACT The interaction between predation and anti-predator defenses of prey is important in shaping community structure in all ecosystems. This study examined the relationship between sponge predation and the distribution of sponge anti-predator defenses on temperate reefs in the South Atlantic Bight. Significant differences in the distribution of sponge species, sponge densities, and densities of sponge predators were documented across two adjacent reef habitats. Significant differences also occurred in the distribution of sponge chemical and structural defenses with chemical deterrence significantly greater in sponges associated with the habitat having higher predation intensity. Structural defenses, although effective in some instances, appear to be inadequate against spongivorous predators thereby restricting the distribution of sponge species lacking chemical defenses to habitats with lower predation intensity. -
Manukau Harbour Targeted Marine Pest Survey May 2019. TR2020/003
Manukau Harbour Targeted Marine Pest Survey May 2019 M. Tupe, C. Woods, S. Happy and C. Boyes February 2020 Technical Report 2020/003 Manukau Harbour targeted marine pest survey May 2019 February 2020 Technical Report 2020/003 M Tupe (nee Vaughan) Environmental Services, Auckland Council C Woods National Institute of Water and Atmospheric Research Ltd, NIWA S Happy Environmental Services, Auckland Council C Boyes Environmental Services, Auckland Council NIWA project: ARC19501 Auckland Council Technical Report 2020/003 ISSN 2230-4525 (Print) ISSN 2230-4533 (Online) ISBN 978-1-99-002202-9 (Print) ISBN 978-1-99-002203-6 (PDF) This report has been peer reviewed by the Peer Review Panel. Review completed on 3 February 2020 Reviewed by two reviewers Approved for Auckland Council publication by: Name: Phil Brown Position: Head of Natural Environment Delivery (Environmental Services) Name: Jonathan Miles Position: Team Manager, Islands (Environmental Services) Date: 3 February 2020 Recommended citation Tupe, M., C Woods, S Happy and C Boyes (2020). Manukau Harbour targeted marine pest survey May 2019. Auckland Council technical report, TR2020/003 © 2020 Auckland Council Auckland Council disclaims any liability whatsoever in connection with any action taken in reliance of this document for any error, deficiency, flaw or omission contained in it. This document is licensed for re-use under the Creative Commons Attribution 4.0 International licence. In summary, you are free to copy, distribute and adapt the material, as long as you attribute it to the Auckland Council and abide by the other licence terms. Executive summary The introduction of new species to an environment in which they did not evolve has been recognised as one of the top threats to ecosystem function and biodiversity. -
HABITAT TYPE and ASSOCIATED BIOLOGICAL ASSEMBLAGES – Shellfish Beds Sculpins, Rockfish, Perch and Herring
HABITAT TYPE AND ASSOCIATED BIOLOGICAL ASSEMBLAGES – Shellfish Beds sculpins, rockfish, perch and herring. Hard substrates are arenaria. Sutton (1978) also delineated beds of the rough an important feeding habitat for harbor seals, including piddock (Zirfaea pilsbryi), a native clam that bores into from the Golden Gate east to Treasure Island, northwest soft rock or clays, as a potential species for sport harvest, to Tiburon Peninsula, and southward to Yerba Buena and suggested that there may be significant subtidal beds Island (Goals Project 2000, Green et al. 2006). Also, of the native bentnose clam (Macoma nasuta), which was many harbor seal haul-out sites are located in close commonly harvested by Native Americans. Some studies proximity to subtidal hard substrate including Point refer in passing to beds of the exotic freshwater Asiatic Bonita, Castro Rocks, Yerba Buena Island, and Angel clam (Corbicula fluminea; harvested for food or bait), Island (Goals Project 2000). Sea lions also feed in deep, native California mussel (Mytilus californianus), bay marine waters of San Francisco Bay; however, they feed mussel (consisting of the native M. trossulus, the exotic M. mostly on seasonally abundant herring associated with galloprovincialis, and their hybrids), exotic ribbed hard structures and eel grass beds in the Central Bay, and horsemussel (Geukensia demissa), native ghost shrimp on spawning salmonids that are migrating up the Bay (Neotrypaea californica), and the blue mud shrimp across multiple habitats to freshwater tributaries. Pacific (Upogebia pugettensis). Jones & Stokes (1977) and Sutton herring is a major prey item for many marine mammal (1978) implied that the ribbed horsemussel might be a species that are drawn to the Bay, including harbor sport-harvested species in the San Francisco Bay. -
Programmatic Essential Fish Habitat (EFH) Assessment for the Long-Term Management Strategy for the Placement of Dredged Material in the San Francisco Bay Region
Programmatic Essential Fish Habitat (EFH) Assessment for the Long-Term Management Strategy for the Placement of Dredged Material in the San Francisco Bay Region July 2009 Executive Summary Programmatic Essential Fish Habitat (EFH) Assessment for the Long-Term Management Strategy for the Placement of Dredged Material in the San Francisco Bay Region Pursuant to section 305(b)(2) of the Magnuson-Stevens Fishery Conservation and Management Act of 1976 (16 U.S.C. §1855(b)), the United States Army Corps of Engineers (USACE) and the United States Environmental Protection Agency (USEPA), as the federal lead and co-lead agencies, respectively, submit this Programmatic Essential Fish Habitat (EFH) Assessment for the Long-Term Management Strategy for the Placement of Dredged Material in the San Francisco Bay Region. This document provides an assessment of the potential effects of the on-going dredging and dredged material placement activities of all federal and non-federal maintenance dredging projects in the action area (see Figure 1.1 located on page 3). The SF Bay LTMS program area spans 11 counties, including: Marin, Sonoma, Napa, Solano, Sacramento, San Joaquin, Contra Costa, Alameda, Santa Clara, San Mateo and San Francisco counties. It does not include the mountainous or inland areas far removed from navigable waters. The geographic scope of potential impacts included in this consultation (action area) comprises the estuarine waters of the San Francisco Bay region, portions of the Sacramento-San Joaquin Delta (Delta) west of Sherman Island and the western portion of the Port of Sacramento and Port of Stockton deep water ship channels. It also includes the wetlands and shallow intertidal areas that form a margin around the Estuary and the tidal portions of its tributaries. -
Becker Et Al. 2014
Biological Conservation 176 (2014) 199–206 Contents lists available at ScienceDirect Biological Conservation journal homepage: www.elsevier.com/locate/biocon The effect of captivity on the cutaneous bacterial community of the critically endangered Panamanian golden frog (Atelopus zeteki) ⇑ Matthew H. Becker a, , Corinne L. Richards-Zawacki b, Brian Gratwicke c, Lisa K. Belden a a Department of Biological Sciences, Virginia Tech, Blacksburg, VA, USA b Department of Ecology and Evolutionary Biology, Tulane University, New Orleans, LA, USA c Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC, USA article info abstract Article history: For many threatened vertebrates, captivity may be the only option for species survival. Maintaining Received 11 February 2014 species in captivity prior to reintroduction presents many challenges, including the need to preserve Received in revised form 21 April 2014 genetic diversity and mitigation of disease risks. Recent studies suggest that captivity can alter the suite Accepted 28 May 2014 of symbiotic microbes that play important roles in host health. The Panamanian golden frog (Atelopus zeteki) has not been seen in its native habitat in Panamá since 2009. Along with habitat loss and illegal collecting, the lethal disease chytridiomycosis, caused by the fungal pathogen Batrachochytrium dendro- Keywords: batidis (Bd), is responsible for the severe decline of this species. Prior to the spread of Bd into golden frog Amphibians habitat, conservation organizations collected golden frogs and placed them in captive survival assurance Captive management Batrachochytrium dendrobatidis colonies. The skin of amphibians is host to a diverse resident bacterial community, which acts as a Probiotic defense mechanism in some amphibians to inhibit pathogens. -
Chapter 9. State of Deep-Sea Coral and Sponge Ecosystems of the U.S
State of Deep‐Sea Coral and Sponge Ecosystems of the Northeast United States Chapter 9 in The State of Deep‐Sea Coral and Sponge Ecosystems of the United States Report Recommended citation: Packer DB, Nizinski MS, Bachman MS, Drohan AF, Poti M, Kinlan BP (2017) State of Deep‐Sea Coral and Sponge Ecosystems of the Northeast United States. In: Hourigan TF, Etnoyer, PJ, Cairns, SD (eds.). The State of Deep‐Sea Coral and Sponge Ecosystems of the United States. NOAA Technical Memorandum NMFS‐OHC‐4, Silver Spring, MD. 62 p. Available online: http://deepseacoraldata.noaa.gov/library. An octopus hides in a rock wall dotted with cup coral and soft coral in Welker Canyon off New England. Courtesy of the NOAA Office of Ocean Exploration and Research. STATE OF DEEP‐SEA CORAL AND SPONGE ECOSYSTEMS OF THE NORTHEAST UNITED STATES STATE OF DEEP-SEA CORAL AND SPONGE David B. Packer1*, ECOSYSTEMS OF THE Martha S. NORTHEAST UNITED Nizinski2, Michelle S. STATES Bachman3, Amy F. Drohan1, I. Introduction Matthew Poti4, The Northeast region extends from Maine to North Carolina ends at and Brian P. the U.S. Exclusive Economic Zone (EEZ). It encompasses the 4 continental shelf and slope of Georges Bank, southern New Kinlan England, and the Mid‐Atlantic Bight to Cape Hatteras as well as four New England Seamounts (Bear, Physalia, Mytilus, and 1 NOAA Habitat Ecology Retriever) located off the continental shelf near Georges Bank (Fig. Branch, Northeast Fisheries Science Center, 1). Of particular interest in the region is the Gulf of Maine, a semi‐ Sandy Hook, NJ enclosed, separate “sea within a sea” bounded by the Scotian Shelf * Corresponding Author: to the north (U.S. -
Redirect Notice
UC San Diego Research Theses and Dissertations Title The population dynamics of mitten crab larvae in the San Francisco Bay Permalink https://escholarship.org/uc/item/01g8c0ck Author Gonzales, Vanessa Alexandra Publication Date 2010-10-01 eScholarship.org Powered by the California Digital Library University of California ABSTRACT THE POPULATION DYNAMICS OF MITTEN CRAB LARVAE IN THE SAN FRANCISCO BAY The Chinese mitten crab, Eriocheir sinensis, has a history of invasions in numerous countries. In 1992, the Chinese mitten crab was introduced to the San Francisco Bay/Delta system. Since its invasion in the San Francisco Bay, it has become an aquatic nuisance species. Little is known about the population dynamics of the megalopa stage of the Chinese mitten crab in the San Francisco Bay estuary, particularly the megalopa stage. Light traps are often used to sample marine larvae and can provide measures for relative abundance of larvae between sampling locations. As part of an ongoing study to monitor mitten crab larvae in the San Francisco Bay, light trap and plankton tow samples were analyzed for mitten crab megalopae and zoeae. In order to implement low cost sampling devices for mitten crab megalopae such as light traps, it is necessary to be able to identify their larvae in collected samples. Thus, the main objective of this work was to develop a means to distinguish mitten crab megalopae from other native and invasive brachyuran megalopae inhabiting the San Francisco Bay Estuary. The minimal amount of mitten crab megalopae found in light trap samples may be linked to the recent decline of mitten crab zoeae in San Pablo Bay. -
González Pisani, Ximena. 2011
Tesis Doctoral Biología reproductiva de los cangrejos ¨Araña¨Leurocyclus tuberculosus y Libinia spinosa (Brachyura, majoidea) del norte de Patagonia González Pisani, Ximena 2011 Este documento forma parte de la colección de tesis doctorales y de maestría de la Biblioteca Central Dr. Luis Federico Leloir, disponible en digital.bl.fcen.uba.ar. Su utilización debe ser acompañada por la cita bibliográfica con reconocimiento de la fuente. This document is part of the doctoral theses collection of the Central Library Dr. Luis Federico Leloir, available in digital.bl.fcen.uba.ar. It should be used accompanied by the corresponding citation acknowledging the source. Cita tipo APA: González Pisani, Ximena. (2011). Biología reproductiva de los cangrejos ¨Araña¨Leurocyclus tuberculosus y Libinia spinosa (Brachyura, majoidea) del norte de Patagonia. Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Cita tipo Chicago: González Pisani, Ximena. "Biología reproductiva de los cangrejos ¨Araña¨Leurocyclus tuberculosus y Libinia spinosa (Brachyura, majoidea) del norte de Patagonia". Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. 2011. Dirección: Biblioteca Central Dr. Luis F. Leloir, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. Contacto: [email protected] Intendente Güiraldes 2160 - C1428EGA - Tel. (++54 +11) 4789-9293 Universidad de Buenos Aires, Argentina FACULTAD DE CIENCIAS EXACTAS Y NATURALES BIOLOGÍA REPRODUCTIVA DE LOS CANGREJOS “ARAÑA” LEUROCYCLUS TUBERCULOSUS Y LIBINIA SPINOSA (BRACHYURA, MAJOIDEA) DEL NORTE DE PATAGONIA. Tesis presentada para optar al título de Doctor de la Universidad de Buenos Aires en el área: CIENCIAS BIOLÓGICAS Ximena González Pisani Directora de tesis: Dra. Laura S. López Greco Director Asistente: Dr. -
The Role of Fishing Vessels As Vectors of Marine and Estuarine Aquatic
Aquatic Invasive Species Vector Risk Assessments: 7KHUROHRIÀVKLQJYHVVHOVDVYHFWRUVIRUPDULQHDQG HVWXDULQHVSHFLHVLQ&DOLIRUQLD Final Report July 2012 Submitted to the California Ocean Science Trust Funded by the California Ocean Protection Council By: The Aquatic Bioinvasion Research & Policy Institute $3DUWQHUVKLSEHWZHHQ3RUWODQG6WDWH8QLYHUVLW\ WKH6PLWKVRQLDQ(QYLURQPHQWDO 5HVHDUFK&HQWHU Ian Davidson, Gail Ashton, Chela Zabin & Greg Ruiz TABLEOFCONTENTS 1.EXECUTIVESUMMARY...........................................................................................................................3 2.INTRODUCTION.....................................................................................................................................5 2.1Aims.....................................................................................................................................................7 3.METHODS............................................................................................................................................10 3.1InvasionHistory&VectorStrength..................................................................................................10 3.2VectorAnalysis..................................................................................................................................11 3.3ImpactsofCaliforniaAISwithfishingvesselbiofoulingasapossiblevector...................................13 3.4Vectordisruption..............................................................................................................................14 -
Sponge Cell Culture
Sponge cell culture Klaske J. Schippers Sponge cell culture Klaske J. Schippers Thesis committee Promotors Submitted in fulfillment of the requirements for the degree of doctor Prof. dr. ir. R.H. Wijffels at Wageningen University Professor of Bioprocess Engineering by the authority of the Rector Magnificus Wageningen University Prof. dr. M.J. Kropff, in the presence of the Co-promotors Thesis Committee appointed by the Academic Board to be defended in public Prof. dr. S.A. Pomponi on Friday 15 February 2013 Professor of Marine Biotechnology, Wageningen University / Professor Harbor at 4 p.m. in the Aula. Branch Oceanographic Institute-Florida Atlantic University, USA Dr.ir. D.E. Martens Assistant professor, Bioprocess Engineering Wageningen University Other members Prof. dr. J. van der Oost, Wageningen University Dr. N.J. de Voogd, Museum Naturalis, Leiden Prof. dr. M.J. Uriz, Centro de Estudios Avanzados de Blanes, Spain Dr. ir. G.P. Pijlman, Wageningen University This research was conducted under the auspices of the Graduate School VLAG (Advances studies in Food Technology, Agrobiotechnology, Nutrition and Health Sciences). Table of contents Chapter 1 Introduction and thesis outline 7 Chapter 2 Cultivation of sponges, sponge cells and symbionts: 21 achievements and future prospects. Advances in Marine Biology 2012. 62: 273-337. Chapter 3 Cell cycle analysis of primary sponge cell cultures. 87 In Vitro Cellular & Developmental Biology – Animal 2011. 47:302-311. Chapter 4 Toward development of a sponge cell line: comparison 105 of cell proliferation in sponge cell and tissue cultures. Submitted for publication. Chapter 5 Methods for insertion and expression of heterologous 127 genes in sponge cells.