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Genevista Microdeletion and Microduplication Syndromes
GeNeViSTA Microdeletion and Microduplication Syndromes: An Update Priya Ranganath, Prajnya Ranganath Department of Medical Genetics, Nizam’s Institute of Medical Sciences, Hyderabad, India Correspondence to: Dr Prajnya Ranganath Email: [email protected] Abstract containing dosage sensitive genes responsible for the phenotype is generally involved (Goldenberg, Microdeletion and microduplication syndromes 2018). Theoretically, for every microdeletion (MMS) also known as ‘contiguous gene syndrome there should be a reciprocal syndromes’ are a group of disorders caused microduplication syndrome, but microdeletions by sub-microscopic chromosomal deletions or are more common. Microduplications appear to duplications. Most of these conditions are typically result in a milder or no clinical phenotype. associated with developmental delay, autism, multiple congenital anomalies, and characteristic Molecular Etiopathology phenotypic features. These chromosomal abnormalities cannot be detected by conventional Copy number variation (CNV) is defined as the gain cytogenetic techniques like karyotyping and or loss of a stretch of DNA when compared with require higher resolution ‘molecular cytogenetic’ the reference human genome and may range in techniques. The advent of high throughput tests size from a kilobase to several megabases or even such as chromosomal microarray in the past one an entire chromosome. The CNVs associated with or two decades has led to a continuously growing MMS constitute only a small fraction of the total list of microdeletions and microduplication number of possible copy-number variants. There syndromes along with identification of the ‘critical are two major classes of CNVs: recurrent and region’ responsible for the main phenotypic non-recurrent. Recurrent CNVs generally result features associated with these syndromes. This from Non-Allelic Homologous Recombination review discusses the etiopathogenic mechanisms (NAHR) during meiosis. -
Duchenne Muscular Dystrophy (DMD)
Pediatric Residents Review Session A bit of a hodge podge to keep you guessing December 20, 2018 Natarie Liu, FRCPC, Pediatric Neurology Email me for resources (OSCE handbook, etc) Thanks to Dr. K. Smyth and Dr. K Murias for inspiration for some of the slides Case 3mo girl with hypotonia, hypotonic facies, 1+ symmetric DTR. What is the most likely diagnosis? a. Congenital muscular dystrophy b. Myotonic dystrophy c. SMA1 d. Nemaline rod Stem not giving this picture OR this picture What is this? Dystrophinopathies Duchenne Muscular Dystrophy Becker Muscular Dystrophy Dystrophinopathies By convention, if boy stops walking before age 12, this is Duchenne Muscular Dystrophy (DMD) If they remain ambulatory after their 16th birthday, are typically considered to have Becker Muscular Dystrophy (BMD) Anything in between is an intermediate phenotype Some centres transition to using Dystrophinopathies as the term Dystrophinopathies are X-linked disorders Dystrophinopathies: Epidemiology Duchenne Muscular Dystrophy 1:3500 live male births but newborn screening places the incidence closer to 1:5000 live male births Mean lifespan 19 years traditionally, now greater than 25 years (with multidisciplinary team management and corticosteroid use) Becker Muscular Dystrophy Incidence 1/10th-1/5th of DMD Prevalence 60-90% more than DMD DMD: Clinical Features Boys often present between 3-5 years of age Delayed motor milestones and falls, difficulty running and jumping Gain motor milestones through 6-7 years of age, progressive weakness after Wheelchair before age 12, historically Examination Calf hypertrophy Mild lordotic posture Waddling of gait Poor hip excursion during running Head lag when pulled from sitting from supine Partial Gower maneuver when rising from floor. -
Digeorge Syndrome
[Downloaded free from http://www.jpgmonline.com on Thursday, October 22, 2015, IP: 120.62.21.80] Grand Round Case “FISHed” out the diagnosis: A case of DiGeorge syndrome Bajaj S, Thombare TS, Tullu MS, Agrawal M Department of Pediatrics, ABSTRACT Seth Gordhandas Our patient presented with congenital heart disease (CHD: Tetralogy of Fallot), hypocalcemia, hypoparathyroidism, Sunderdas Medical College and King Edward and facial dysmorphisms. Suspecting DiGeorge syndrome (DGS), a fluorescence in situ hybridization (FISH) Memorial Hospital, analysis for 22q11.2 deletion was made. The child had a hemizygous deletion in the 22q11.2 region, diagnostic Mumbai, Maharashtra, of DGS. Unfortunately, the patient succumbed to the heart disease. DGS is the most common microdeletion India syndrome, and probably underrecognized due to the varied manifestations. This case stresses the importance of a detailed physical examination and a high index of suspicion for diagnosing this genetic condition. Timely Address for correspondence: diagnosis can help manage and monitor these patients better and also offer prenatal diagnosis in the next Dr. Milind S Tullu, pregnancy. E-mail: milindtullu@ yahoo.com Received : 18-05-2015 Review completed : 19-06-2015 KEY WORDS: Child, congenital heart disease (CHD), DiGeorge syndrome (DGS), dysmorphism, genetic Accepted : 05-10-2015 counseling, microdeletion Case Details were below the third percentile for his age (weight 3.5 kg, length 61 cm, head circumference 37 cm). A closer look, ur patient was an 8-month-old male child of Indian however, revealed some alerting dysmorphic features in Oorigin and the first issue of a nonconsanguineous the child. He had narrow and upslanting palpebral fissures, marriage. -
Clinical Findings in 32 Patients with 22Qll.2 Microdeletion Attended in the City of Córdoba, Argentina
Brief report Arch Argent Pediatr 2013;111(5):423-427 / 423 Clinical findings in 32 patients with 22qll.2 microdeletion attended in the city of Córdoba, Argentina Cecilia del Carmen Montes, M.D.a,b, Alicia Sturich, Biologista,b,Alejandra Chaves, B.S.a, Ernesto Juaneda, M.D.c, Julio Orellana, M.D.d, Roberto De Rossi, M.D.e, Blanca Pereyra, B.S.a, Luis Alday, M.D.c, and Norma Teresa Rossi, M.D.a,b ABSTRACT INTRODUCTION The 22q11.2 microdeletion is the most common deletion The 22q11.2 microdeletion is the most syndrome, with a prevalence of 1/4000-1/6000 among newborn infants and a wide phenotypic variability. The diagnosis of common cause of microdeletion in human beings the 22q11.2 microdeletion is made through cytogenetics or and has a prevalence of 1/4000-1/6000 among fluorescence in situ hybridization (FISH). The objectives of this live newborn infants. Approximately 95% of article were to describe the clinical features of 32 patients with the cases are diagnosed when a loss of genetic 22q11.2 microdeletion and the findings of other chromosomal abnormalities and genetic syndromes in phenotypically similar material is observed through the fluorescence in patients. This series was made up of 268 patients with clinical situ hybridization (FISH) technique. Tobías, et al. criteria supporting the diagnostic suspicion attended at the recommend the use of the FISH technique for the Hospital de Niños and Hospital Privado, of Córdoba, between 22q11.2 microdeletion in patients with conotruncal March 1st, 2004 and August 31st, 2011. The following parameters were analyzed: age at the time of the diagnosis, sex, clinical heart defects, or in the parents of patients with manifestations, and mortality. -
Genes, Hearing, and Deafness : from Molecular Biology to Clinical Practice
1181 FM 4/4/07 4:16 PM Page i Genes, Hearing, and Deafness From Molecular Biology to Clinical Practice Edited by Alessandro Martini Audiology and ENT Clinical Institute University of Ferrara Ferrara Italy Dafydd Stephens School of Medicine Cardiff University Cardiff Wales Andrew P Read Department of Medical Genetics St Mary’s Hospital Manchester UK 1181 FM 4/4/07 4:16 PM Page ii © 2007 Informa UK Ltd First published in the United Kingdom in 2007 by Informa Healthcare, Telephone House, 69–77 Paul Street, London EC2A 4LQ. Informa Healthcare is a trading division of Informa UK Ltd. Registered Office: 37/41 Mortimer Street, London W1T 3JH. Registered in England and Wales number 1072954. Tel: +44 (0)20 7017 6000 Fax: +44 (0)20 7017 6699 Website: www.informahealthcare.com All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, without the prior permission of the publisher or in accordance with the provisions of the Copyright, Designs and Patents Act 1988 or under the terms of any licence permitting limited copying issued by the Copyright Licensing Agency, 90 Tottenham Court Road, London W1P 0LP. Although every effort has been made to ensure that all owners of copyright material have been acknowledged in this publication, we would be glad to acknowledge in subsequent reprints or seditions any omissions brought to our attention. Although every effort has been made to ensure that drug doses and other information are presented accurately in this publication, the ultimate responsibility rests with the prescribing physician. -
D. Wangl, R. Sapolsky2,1, Spencer.1, T. Riouxl, L
Session 20: Plenary Session A3 1 2 Genome-wide screen for Hirschsprung disease susceptibility loci in a Correction of the high-SCE phenotype in Bloom's syndrome (BS) cells Mennonite kindred segregating an endothelin-B receptor mutation. by transfection of the wild-type gene. J. German. M. Proytcheva. T.-Z. Ye. E.G. Puffenberger. A. Lynn, C. Kashuk, and A. Chakravarti. Dept. of Genetics, Case M. Sanz. N. Neff. N. A. Ellis. New York Blood Center, New York, NY. Weserin Reserve Univ., Cleveland, OH. BS is a rare autosomal recessive disorder characterized bv short stature and Genome-wide screens using polymorphic markers in segregating multiplex families are predisposition to developing cancer. An excessive rate of sister-chromatid exchanges now routine for localizing disease genes. In principle, susceptibility loci may even be (SCEs) in proliferating BS cells is a unique and diagnostic feature of the syndrome. mapped in simplex families by searching for allelic associations between genetic Recently, the BS gene, BLM, was isolated and shown to encode a 1417 amino acid markers and disease phenotype. This exercise is most efficient in isolated populations protein product homologous to RecQ helicases (Ellis et aL, 1995). We have introduced where large genomic segments will be shared by affected individuals on the basis of the wild-type BLM cDNA into BS cells in order to test its ability to correct the high- common ancestry. We demonstrate the identification of multiple genomic regions that SCE phenotype of BS cells. harbor putative susceptibility loci for Hirschsprung disease (HSCR) in a large, inbred A full-length BLM cDNA, R 12, was transferred into pOPRSVI-CAT, a mammalian Mennonite kindred by using genome-wide association mapping. -
Syndrome? J Med Genet: First Published As 10.1136/Jmg.34.1.79 on 1 January 1997
I Med Genet 1997;34:79-82 79 Anal anomalies: an uncommon feature of velocardiofacial (Shprintzen) syndrome? J Med Genet: first published as 10.1136/jmg.34.1.79 on 1 January 1997. Downloaded from S Worthington, A Colley, K Fagan, Kang Dai, A H Lipson* Abstract advanced maternal age, was reported as a nor- We report three cases of velocardiofacial mal male karyotype. The neonatal period was syndrome (VCFS) with anal anomalies complicated by hypotonia and feeding diffi- who have deletions of the 22qll region culties and gastro-oesophageal reflux. Con- and a further case where the proband has stipation owing to anal stenosis was a problem VCFS clinically and her father has an anal from the first month of age. At 7 months anomaly. It is important to consider VCFS of age he underwent an anoplasty which was in the differential diagnosis of children successful in treating the constipation. with anal anomalies and to look for other He had significant global developmental and features of the syndrome, such as asym- expressive speech delay with a normal hearing metrical crying facies, submucous cleft of assessment. A skeletal survey showed spina the palate, developmental delay, cardiac bifida occulta. At 4 years of age he was referred anomalies, and hypoparathyroidism. to a child development unit where the diagnosis (J Med Genet 1997;34:79-82) of VCFS was suggested. Review by a geneticist confirmed facial dysmorphic features (fig 1) of Keywords: anal anomalies; velocardiofacial syndrome; micrognathia, almond shaped palpebral fis- 22ql deletion. sures, deficient alae nasi, broad nasal bridge, prominent dysplastic ears, and a short, hy- potonic palate with a single uvula. -
View & Print the Complete Manual
CHARGE SYNDROME A MANAGEMENT MANUAL FOR PARENTS Edited by Meg Hefner, M.S. and Sandra L.H. Davenport, M.D. © CHARGE Syndrome Foundation, Inc. 1999, 2001, 2012 318 Half Day Road #305, Buffalo Grove, IL 60089 (800) 442-7604 (516) 684-4720 (888) 317-4735 Fax www.chargesyndrome.org [email protected] This project was supported by: ♦ The Minnesota DeafBlind Project ♦ The Maryland Jaycees ♦ The CHARGE Syndrome Foundation, Inc. Copyright note: Parents and others are invited to make copies of sections of this manual for use by individuals involved with the management of children with CHARGE. No part of this publication may be reproduced in any publication, including the Internet, without permission from the CHARGE Syndrome Foundation, Inc. and the author (or the holder of the copyright) of each section. CHARGE Parent Manual: Table of Contents Version 2.1, July 2001 Updated September 2012 I. Introduction History of the CHARGE Syndrome Foundation, Inc. and the Manual Stories from Families II. Priorities: What is most important for your child III. Medical Aspects of CHARGE A. Introduction to Medical Section B. Medical Visit Pad/Record Keeping C. Overview for Physicians D. Diagnosis, Genetics, and Prenatal Diagnosis E. Cranial Nerves and Brain F. Sensory Loss and Development G. Eyes H. Ears and Hearing I. Choanal Atresia J. Cleft Lip and Palate K. T-E Fistula and Esophageal Atresia L. Airway M. Swallowing and Feeding N. Heart O. Renal and Urinary P. Genital/Endocrine Q. Muscles and Bones R. Growth S. Adolescence T. Life Expectancy IV. Development and Education in CHARGE Introduction to the Development and Learning Sections A. -
Appendix 3.1 Birth Defects Descriptions for NBDPN Core, Recommended, and Extended Conditions Updated March 2015
Appendix 3.1 Birth Defects Descriptions for NBDPN Core, Recommended, and Extended Conditions Updated March 2015 Participating members of the Birth Defects Definitions Group: Lorenzo Botto (UT) John Carey (UT) Cynthia Cassell (CDC) Tiffany Colarusso (CDC) Janet Cragan (CDC) Marcia Feldkamp (UT) Jamie Frias (CDC) Angela Lin (MA) Cara Mai (CDC) Richard Olney (CDC) Carol Stanton (CO) Csaba Siffel (GA) Table of Contents LIST OF BIRTH DEFECTS ................................................................................................................................. I DETAILED DESCRIPTIONS OF BIRTH DEFECTS ........................................................................................ 1 FORMAT FOR BIRTH DEFECT DESCRIPTIONS ......................................................................................................................... 1 CENTRAL NERVOUS SYSTEM ........................................................................................................................ 2 ANENCEPHALY ............................................................................................................................................................... 2 ENCEPHALOCELE ............................................................................................................................................................ 3 HOLOPROSENCEPHALY .................................................................................................................................................... 4 SPINA BIFIDA WITHOUT ANENCEPHALY .............................................................................................................................. -
Genevista Fetal Dysmorphology: an Indispensable Tool for Synthesis Of
GeNeViSTA Fetal Dysmorphology: An Indispensable Tool for Synthesis of Perinatal Diagnosis Shagun Aggarwal Department of Medical Genetics, Nizam’s Institute of Medical Sciences, Hyderabad & Centre for DNA Fingerprinting and Diagnostics, Hyderabad Email: [email protected] Introduction for pregnancy management as it aids in accurate prognostication and communicating the possibility of intellectual disability and other co-morbidities in Dysmorphology is the science (and art!) of studying such children, helps in decision-making regarding abnormal form, with special emphasis on subtle termination or continuation of pregnancy, facili- ndings which provide clue to an underlying diag- tates appropriate postnatal management and also nosis, mostly a genetic syndrome. It has been the provides recurrence risk estimates for subsequent prime tool of the geneticist enabling a syndromic conceptions. In the postnatal scenario, such a diag- diagnosis on basis of patient’s gestalt with ndings nosis facilitates emotional closure, recurrence risk like a white forelock, heterochromia iridis, broad counseling and early, denitive prenatal diagnosis thumb, asymmetric crying facies and many other in subsequent pregnancies. subtle features acting as decisive tools in the ge- Any morphological or growth abnormality in the netics clinic. Most individuals with dysmorphism fetal life can be an isolated abnormality of multi- are affected with genetic syndromes, which can factorial origin, the consequence of environmental be due to chromosomal abnormalities, copy num- etiologies like a teratogenic insult, intrauterine fac- ber variations or single gene defects. However, tors, maternal illness, etc. or a component of a various environmental factors can also lead to genetic syndrome. In such a scenario, it is impor- dysmorphism, many times mimicking specic ge- tant to be aware of these possibilities, and perform netic syndromes due to involvement of a common a complete dysmorphological evaluation with an biological pathway. -
7.1 Birth Defects Code List
7.1 BIRTH DEFECTS CODE LIST Based on the British Pediatric Association (BPA) Classification of Diseases (1979) and the World Health Organization's International Classification of Diseases, 9th Revision, Clinical Modification (ICD-9-CM) (1979) Code modifications developed by Division of Birth Defects and Developmental Disabilities National Center on Birth Defects and Developmental Disabilities Centers for Disease Control and Prevention Public Health Service U.S. Department of Health and Human Services Atlanta, Georgia 30333 and Birth Defects Epidemiology and Surveillance Branch Epidemiology and Disease Surveillance Unit Texas Department of State Health Services 1100 West 49th Street Austin, TX 78756 Revised July 31, 2019 TABLE OF CONTENTS Table of Contents .................................................................................................................................................. 2 Introduction To Birth Defect Diagnosis Coding ................................................................................................. 7 Purpose ............................................................................................................................................................ 7 BPA coding system .......................................................................................................................................... 7 Description of the BPA code ............................................................................................................................ 8 Problems with the -
Familial Congenital Facial Synkinesis
Familial Congenital Facial Synkinesis Due to 12q Duplication: A Case Report and Literature Review Kenneth Alexis Myers, MD, PhD, a, b Allan Micheil Innes, MD, c Jean Kit-Wah Mah, MDb Inverse Marcus Gunn phenomenon is a rare form of congenital facial abstract synkinesis in which jaw movement temporarily elicits ptosis, either unilateral or bilateral. This phenomenon is presumed to result from dysinnervation of facial muscles during development of the nervous system. We describe 2 brothers, both with inverse Marcus Gunn phenomenon in the context of multiple other congenital anomalies, all presumed secondary to a chromosomal abnormality involving 12q duplication and 1p36 deletion. Although a handful of familial cases of congenital facial synkinesis have been previously described, this is the first in which a genetic abnormality has been identified. Of the 4 genetic abnormalities previously described a Department of Neurology, Epilepsy Research Centre, in association with congenital facial synkinesis (based on isolated case Austin Health, University of Melbourne, Melbourne, reports), 1 also involved duplication at the long arm of chromosome 12. We Australia; and Departments of bPediatrics, Section of ≥ Neurology, and cMedical Genetics, Cumming School of conclude that duplication of 1 of the roughly 44 protein-coding genes in the Medicine, University of Calgary, Calgary, Alberta, Canada ∼6.3-Mb overlap region between the previously published case and our 2 patients is a likely genetic cause of congenital facial synkinesis. Dr Myers collected the data, prepared fi gures and tables, and drafted the initial manuscript; Dr Innes assisted with interpretation and description of the genomic abnormalities and reviewed and edited Congenital facial synkinesis is a rare of age with focal seizures, some of the manuscript; Dr Mah confi rmed the clinical data and reviewed and edited the manuscript; entity resulting from aberrant facial which had secondary generalization.