Odorrana Schmackeri)Is Affected by Patch Isolation and Resource Limitation in a Fragmented Landscape
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A New Species of Odorrana Inhabiting Complete Darkness in a Karst Cave in Guangxi, China
Asian Herpetological Research 2015, 6(1): 11–17 ORIGINAL ARTICLE DOI: 10.16373/j.cnki.ahr.140054 A New Species of Odorrana Inhabiting Complete Darkness in a Karst Cave in Guangxi, China Yunming MO1, Weicai CHEN1*, Huaying WU1, Wei ZHANG2 and Shichu ZHOU1 1 Natural History Museum of Guangxi, Nanning 530012, Guangxi, China 2 School of Life Sciences, East China Normal University, Shanghai 200062, China Abstract A new species of the genus Odorrana is described from a completely dark karst cave of northeastern Guangxi, southern China. The new species, Odorrana lipuensis sp. nov., can be distinguished from its congeners by a combination of the following characters: medium size (SVL: 40.7–47.7 mm in males, 51.1–55.4 mm in females); tips of all but first finger expanded with circummarginal grooves; smooth, grass-green dorsum with irregular brown mottling; pineal body invisible; throat to upper abdomen with gray mottling; dorsal surfaces of limbs with brown bands; dorsolateral fold absent; tiny spinules on lateral body, temporal region, and anterior and posterior edge of tympanum; white nuptial pad present on finger I; males lacking vocal sacs; females having creamy yellow eggs, without black poles. Uncorrected sequence divergences between O. lipuensis sp. nov. and all homologous 16S rRNA sequences of Odorrana available on GenBank is equal to or greater than 4.9%. Currently, the new species is only known from the type locality. Keywords Odorrana lipuensis sp. nov., karst cave, Guangxi, southern China 1. Introduction monophyletic group (Chen et al., 2013). All are known to be associated with mountain streams except O. -
Host Defense Peptides from Asian Frogs As Potential Clinical Therapies
Host Defense Peptides from Asian Frogs as Potential Clinical Therapies. Vineeth T.V. Kumar, Rajiv Gandhi Centre for Biotechnology (RGCB) David Holthausen, Emory University Joshy Jacob, Emory University Sanil George, Rajiv Gandhi Centre for Biotechnology (RGCB) Journal Title: Antibiotics Volume: Volume 4, Number 2 Publisher: MDPI | 2015, Pages 136-159 Type of Work: Article | Final Publisher PDF Publisher DOI: 10.3390/antibiotics4020136 Permanent URL: https://pid.emory.edu/ark:/25593/rmwpf Final published version: http://dx.doi.org/10.3390/antibiotics4020136 Copyright information: © 2015 by the authors; licensee MDPI, Basel, Switzerland. This is an Open Access work distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/). Accessed September 24, 2021 11:23 PM EDT Antibiotics 2015, 4, 136-159; doi:10.3390/antibiotics4020136 OPEN ACCESS antibiotics ISSN 2079-6382 www.mdpi.com/journal/antibiotics Review Host Defense Peptides from Asian Frogs as Potential Clinical Therapies Vineeth T.V. Kumar 1, David Holthausen 2, Joshy Jacob 2,* and Sanil George 1,* 1 Molecular Ecology Lab, Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram, Kerala 695014, India; E-Mail: [email protected] 2 Emory Vaccine Center, Department of Microbiology and Immunology, Emory University, Yerkes National Primate Research Center, 954 Gatewood Rd, Atlanta, GA 30329, USA; E-Mail: [email protected] * Authors to whom correspondence should be addressed; E-Mails: [email protected] (J.J.); [email protected] (S.G.); Tel.: +1-404-727-7919 (J.J.); +91-471-252-9520 (S.G.). Academic Editor: William M. Shafer Received: 10 November 2014 / Accepted: 4 March 2015 / Published: 30 March 2015 Abstract: Host defense peptides (HDPs) are currently major focal points of medical research as infectious microbes are gaining resistance to existing drugs. -
A New Species of Odorrana (Anura, Ranidae) from Hunan Province, China
ZooKeys 1024: 91–115 (2021) A peer-reviewed open-access journal doi: 10.3897/zookeys.1024.56399 RESEarch arTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research A new species of Odorrana (Anura, Ranidae) from Hunan Province, China Bing Zhang1, Yuan Li1, Ke Hu1, Pipeng Li2, Zhirong Gu3, Nengwen Xiao4, Daode Yang1 1 Institute of Wildlife Conservation, Central South University of Forestry and Technology, Changsha 410004, China 2 Institute of Herpetology, Shenyang Normal University, Shenyang 110034, China 3 Bureau of Hunan Badagongshan National Nature Reserve, Sangzhi 427100, China 4 State Environmental Protection Key Labo- ratory of Regional Eco-process and Function Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China Corresponding author: Daode Yang ([email protected]) Academic editor: A. Crottini | Received 12 July 2020 | Accepted 30 December 2020 | Published 15 March 2021 http://zoobank.org/756CA7F5-A4C1-4759-AB64-8C147F6C9A6A Citation: Zhang B, Li Y, Hu K, Li P, Gu Z, Xiao N, Yang D (2021) A new species of Odorrana (Anura, Ranidae) from Hunan Province, China. ZooKeys 1024: 91–115. https://doi.org/10.3897/zookeys.1024.56399 Abstract A new species, Odorrana sangzhiensis sp. nov., is described, based on five specimens from Sangzhi County, Zhangjiajie City, Hunan Province, China. Molecular phylogenetic analyses, based on mitochondrial 12S rRNA and 16S rRNA gene sequences, strongly support the new species as a monophyletic group nested into the O. schmackeri species complex. The new -
A Biogeographic Synthesis of the Amphibians and Reptiles of Indochina
BAIN & HURLEY: AMPHIBIANS OF INDOCHINA & REPTILES & HURLEY: BAIN Scientific Publications of the American Museum of Natural History American Museum Novitates A BIOGEOGRAPHIC SYNTHESIS OF THE Bulletin of the American Museum of Natural History Anthropological Papers of the American Museum of Natural History AMPHIBIANS AND REPTILES OF INDOCHINA Publications Committee Robert S. Voss, Chair Board of Editors Jin Meng, Paleontology Lorenzo Prendini, Invertebrate Zoology RAOUL H. BAIN AND MARTHA M. HURLEY Robert S. Voss, Vertebrate Zoology Peter M. Whiteley, Anthropology Managing Editor Mary Knight Submission procedures can be found at http://research.amnh.org/scipubs All issues of Novitates and Bulletin are available on the web from http://digitallibrary.amnh.org/dspace Order printed copies from http://www.amnhshop.com or via standard mail from: American Museum of Natural History—Scientific Publications Central Park West at 79th Street New York, NY 10024 This paper meets the requirements of ANSI/NISO Z39.48-1992 (permanence of paper). AMNH 360 BULLETIN 2011 On the cover: Leptolalax sungi from Van Ban District, in northwestern Vietnam. Photo by Raoul H. Bain. BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY A BIOGEOGRAPHIC SYNTHESIS OF THE AMPHIBIANS AND REPTILES OF INDOCHINA RAOUL H. BAIN Division of Vertebrate Zoology (Herpetology) and Center for Biodiversity and Conservation, American Museum of Natural History Life Sciences Section Canadian Museum of Nature, Ottawa, ON Canada MARTHA M. HURLEY Center for Biodiversity and Conservation, American Museum of Natural History Global Wildlife Conservation, Austin, TX BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY Number 360, 138 pp., 9 figures, 13 tables Issued November 23, 2011 Copyright E American Museum of Natural History 2011 ISSN 0003-0090 CONTENTS Abstract......................................................... -
I the Diversity of Amphibians in Tarutao Island, Satun Province With
i The Diversity of Amphibians in Tarutao Island, Satun Province with The Comparative Study of Hylarana eschatia (Inger, Stuart and Iskandar, 2009) between Tarutao Island and Peninsular Thailand Tshering Nidup A Thesis Submitted in Fulfillment of the Requirements for the Degree Masters of Science in Ecology Prince of Songkla University 2014 Copyright of Prince of Songkla University ii Thesis Title The Diversity of Amphibians in Tarutao Island, Satun Province with The Comparative Study of Hylarana eschatia (Inger, Stuart and Iskandar, 2009) between Tarutao Island and Peninsular Thailand Author Mr. Tshering Nidup Major Program Ecology Major Advisor Examining Committee: ………………………………. ……………………...……….Chairperson (Dr. Sansareeya Wangkulangkul) (Asst. Prof. Dr. Supiyanit Maiphae) Co-advisor ……………………..….……………........ …………………………………….... (Dr. Sansareeya Wangkulangkul) (Assoc. Prof. Dr. Chutamas Satasook) …………………………….……..……… ……………………. (Assoc. Prof. Dr. Chutamas Satasook) (Dr. Paul J. J. Bates) …………………………………………....... (Dr. Anchalee Aowphol) The Graduate School, Prince of Songkla University, has approved this thesis as fulfillment of the requirements for the Master of Science, Degree in Ecology. ………………………..…………… (Assoc. Prof. Dr. Teerapol Srichana) Dean of Graduate School iii This is to certify that the work here submitted is the result of the candidate’s own investigations. Due acknowledgement has been made of any assistance received. .…………...………………… Signature (Dr. Sansareeya Wangkulangkul) Major Advisor ……………...………………… Signature (Mr. Tshering Nidup) -
Ecological Studies and Conservation Status Assessment on Two Endangered Vibrissaphora Toads in China
Ecological Studies and Conservation Status Assessment on Two Endangered Vibrissaphora Toads in China Final Report August, 2007-August, 2008 Mustache Toad Project Group Southwest Forestry College Written By Ben Han, Lianxian Han, Han Liu, Yueqiang Liu, Guangxu Huang 1 Project ID: 060107 Taxa: Amphibian Country: China Region: Asia Team Leader: Ben Han Award Category: Future Conservationist Project Duration: August, 2007—August, 2008 Contributive Member List Team Leader: Ben Han Team Members: Fuping, Sun, Han Liu, Zhongrong Wu, Yang Li, Shaojun Yang, Zhenguo Xie, Jijun Chen, Yueqiang Liu, Guangxu Huang, Xiaoping Lei, Jiawei Yang, Tengfang Lai Science Advisor: Lianxian Han (Primary), Dingqi Rao (Secondary) Chytrid Fungus Testing Assistance: Jodi Rowley (Conservation International) Participated Institutions (a) Department of Conservation Biology, Southwest Forestry College (SWFC), Bailong Temple, Kunming, Yunnan, China, 650224 (b) Leigongshan National Nature Reserve, Guizhou, China (c) Fanjingshan National Nature Reserve, Guizhou, China (d) Xiaoxi, Jiemuxi, and Badagongshan National Nature Reserve, Hunan, China (Three separate NNRs in Hunan Province) 2 Content Part A Preparation Introduction………………………………….………………………………….5 Issues……………………………………………..…………………………….7 Objectives…………………………………………...………………………….8 Team Members……………………………..…………………………………11 Part B Research and Assessment Site A: Leigongshan National Nature Reserve…………………………….16 Site B: Fanjingshan National Nature Reserve……………………………..58 Site C: Distribution and Status in Hunan province………………………...91 -
Climatic Niche Measures and Extinction Risks of Amphibians In
Australian Systematic Botany, 2017, 30, 414–421 ©CSIRO 2017 doi:10.1071/SB17001_AC Supplemental material Correlates of ecological-niche diversity and extinction risk of amphibians in China under climate change Youhua ChenA,C,D and Tania EscalanteB AChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610000, P.R. China. BGrupo de Biogeografía de la Conservación, Departamento de Biología Evolutiva, Facultad de Ciencias, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Coyoacán, CP 04510, México. CDepartment of Renewable Resources, University of Alberta, Edmonton, AB, T6G 2H1, Canada. DCorresponding author. Email: [email protected] Page 1 of 12 Australian Systematic Botany ©CSIRO 2017 doi:10.1071/SB17001_AC Table S1. Correlations of different niche diversity metrics and the significance of the correlations Upper triangular matrix collects the correlation values, whereas the lower triangular matrix collects the P-values of the correlations. NC, niche connectivity; TNC, trend of NC; NB, niche breadth; TNB, trend of NB; NP, niche position; TNP, trend of NP; NA, niche amount; TNA, trend of NA; NCO, niche spatial correlation; TNCO, trend of NCO; NPA, niche packing; TNPA, trend of NPA; NFD, niche fractal dimension; TNFD, trend of NFD; NV, niche volume; and TNV, trend of NV NB NP NC NA NCO NPA NFD TNB TNP TNC TNA TNCO TNPA TNFD NB 1.000 0.515 0.263 0.088 0.335 –0.168 –0.071 –0.269 –0.056 –0.081 0.027 –0.086 0.095 –0.017 NP 0.000 1.000 0.003 –0.318 0.342 0.633 –0.423 –0.125 –0.134 –0.089 0.088 –0.151 -
李永民, 吴孝兵. 安徽省两栖爬行动物名录修订. 生物多样性, 2019, 27 (9): 1002–1011
李永民, 吴孝兵. 安徽省两栖爬行动物名录修订. 生物多样性, 2019, 27 (9): 1002–1011. http://www.biodiversity-science.net/CN/10.17520/biods.2019036 附录1 安徽省两栖爬行类分类与分布名录 Appendix 1 A classification and distribution checklist of amphibians and reptiles in Anhui Province 区系型 种名 地理分布 濒危等级 文献 Distribution Species Distribution Status References pattern 两栖纲 Amphibia 有尾目 Caudata 小鲵科 Hynobiidae 1. 安吉小鲵 Hynobius amjiensis Ⅴ O CR; 3 李永民等, 2013 2. 商城肥鲵 Pachyhynobius shang Ⅲ O VU; 3 陈壁辉, 1991; 费梁等, 2006 chengensis 隐鳃鲵科 Cryptobranchidae 3. 大鲵 Andrias davidianus Ⅲ、Ⅴ W CR; 2; I 陈壁辉, 1991; 费梁等, 2006 蝾螈科 Salamandridae 4. 安徽疣螈 Tylototriton anhuiensis Ⅲ O NE Qian et al, 2017 5. 大别疣螈 T. dabienicus Ⅲ O EN 陈晓虹等, 2010a; Shen et al, 2012 6. 东方蝾螈 Cynops orientalis Ⅱ、Ⅲ、Ⅴ O NT; 3 陈壁辉, 1991; 许雪峰, 2001 7. 费氏肥螈 Pachytriton feii Ⅴ O NT Nishikawa et al, 2011; 费梁等, 2012 8. 无斑肥螈 P. labiatus Ⅴ O VU; 3 陈壁辉, 1991; 费梁等, 2006 9. 中国瘰螈 Paramesotriton chinesis Ⅴ O NT; 3 陈壁辉, 1991; 费梁等, 2012 无尾目 Anura 角蟾科 Megophryidae 10. 黄山角蟾 Megophrys huang Ⅴ O VU 费梁等, 2005, 2009a; 杨剑焕 shanensis 等, 2013 蟾蜍科 Bufonidae 11. 花背蟾蜍 Bufo raddei Ⅰ P LC; 3; 4 陈壁辉, 1991; 费梁等, 2009a 12. 中华蟾蜍 B. gargarizans Ⅰ、Ⅱ、Ⅲ、 W LC; 3; 4 陈壁辉, 1991; 费梁等, 2009a Ⅳ、Ⅴ 雨蛙科 Hylidae 13. 秦岭雨蛙 Hyla tsinlingensis Ⅲ O LC 陈壁辉, 1991; 费梁等, 2009a; 潘涛等, 2014 14. 三港雨蛙 H. sanchiangensis Ⅲ、Ⅴ O LC 陈壁辉, 1991; 费梁等, 2009a 15. 无斑雨蛙 H. immaculate Ⅱ、Ⅲ、Ⅳ、 W LC 陈壁辉, 1991; 费梁等, 2009a Ⅴ 16. 中国雨蛙 H. chinensis Ⅲ、Ⅴ O LC 陈壁辉, 1991; 费梁等, 2009a 树蛙科 Rhacophoridae 17. 布氏泛树蛙 Polypedates braueri Ⅲ、Ⅴ O LC; 3 Li et al, 2013; Pan et al, 2013 18. -
Interspecific Amplexus Between Glandirana Tientaiensis (Chang, 1933) and Odorrana Schmackeri (Boettger, 1892) at the Fuchun River, Eastern China
Herpetology Notes, volume 12: 41-42 (2019) (published online on 10 January 2019) Interspecific amplexus between Glandirana tientaiensis (Chang, 1933) and Odorrana schmackeri (Boettger, 1892) at the Fuchun River, eastern China Jordy Groffen1, Yi Yang2, Amaël Borzée1, and Yikweon Jang1,* During the breeding season, adult male anurans can have negative demographic consequences (Pearl et vocalize to attract females despite the risk of increased al., 2005; Amore et al., 2009). predation. Anurans usually distinguish mates through Herein we report, to the best of our knowledge, the visual, chemical, or acoustic signals (e.g., Bowcock first case of interspecific amplexus (Fig. 1) between et al., 2008; Belanger and Corkum, 2009). This is an adult male Tiantai frog, Glandirana tientaiensis important as egg fertilization is primarily external, (Chang, 1933), and an adult Kaochahien frog, and takes place during amplexus between a male Odorrana schmackeri (Boettger, 1892) of unknown sex. and a female (Wells, 2007). In anurans, interspecific This event was recorded on 7 July 2017 at 2007 h, in the amplexus is a relatively rare behaviour, with fewer than Xiekengkoucun area at a rocky, shallow side stream of 15 reports of interspecific combinations in 2016 and the Fuchun River in China (29.6747°N, 119.6848°E; 2017, in different locations and latitudes around the WGS84; 152 m a.s.l.). Odorrana schmackeri has a world (e.g., Müller, 2016; Beranek, 2017; Mudrek et broad distribution whereas G. tientaiensis is listed by the al., 2017). Some species have frequently been recorded IUCN as Near Threatened due to a small and declining with erroneous mates, for example Atelopus laetissimus, area of occupancy (Lau and Huiqing, 2004). -
Complete Mitochondrial Genomes of Nanorana Taihangnica and N
Zhang et al. BMC Evolutionary Biology (2018) 18:26 https://doi.org/10.1186/s12862-018-1140-2 RESEARCH ARTICLE Open Access Complete mitochondrial genomes of Nanorana taihangnica and N. yunnanensis (Anura: Dicroglossidae) with novel gene arrangements and phylogenetic relationship of Dicroglossidae Jia-Yong Zhang1,2,3, Le-Ping Zhang2, Dan-Na Yu1,2* , Kenneth B. Storey3 and Rong-Quan Zheng4 Abstract Background: Complete mitochondrial (mt) genomes have been used extensively to test hypotheses about microevolution and to study population structure, phylogeography, and phylogenetic relationships of Anura at various taxonomic levels. Large-scale mt genomic reorganizations have been observed among many fork-tongued frogs (family Dicroglossidae). The relationships among Dicroglossidae and validation of the genus Feirana are still problematic. Hence, we sequenced the complete mt genomes of Nanorana taihangnica (=F. taihangnica)andN. yunnanensis as well as partial mt genomes of six Quasipaa species (dicroglossid taxa), two Odorrana and two Amolops species (Ranidae), and one Rhacophorus species (Rhacophoridae) in order to identify unknown mt gene rearrangements, to investigate the validity of the genus Feirana, and to test the phylogenetic relationship of Dicroglossidae. Results: In the mt genome of N. taihangnica two trnM genes, two trnP genes and two control regions were found. In addition, the trnA, trnN, trnC,andtrnQ genes were translocated from their typical positions. In the mt genome of N. yunnanensis, three control regions were found and eight genes (ND6, trnP, trnQ, trnA, trnN, trnC, trnY and trnS genes) in the L-stand were translocated from their typical position and grouped together. We also found intraspecific rearrangement of the mitochondrial genomes in N. -
Multiple Invasions of the Ryukyu Archipelago by Oriental Frogs of the Subgenus Odorrana with Phylogenetic Reassessment of the Related Subgenera of the Genus Rana
Molecular Phylogenetics and Evolution 37 (2005) 733–742 www.elsevier.com/locate/ympev Multiple invasions of the Ryukyu Archipelago by Oriental frogs of the subgenus Odorrana with phylogenetic reassessment of the related subgenera of the genus Rana Masafumi Matsui a,¤, Tomohiko Shimada a, Hidetoshi Ota b, Tomoko Tanaka-Ueno a,c a Graduate School of Human and Environmental Studies, Kyoto University, Sakyo, Kyoto 606-8501, Japan b Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa 903-0213, Japan c Department of Cellular and Molecular Biology, Primate Research Institute, Kyoto University, Inuyama, Aichi 484-8506, Japan Received 27 January 2005; revised 2 April 2005 Available online 16 June 2005 Abstract The genus Rana, notably diversiWed in Oriental regions from China to Southeast Asia, includes a group of cascade frogs assigned to subgenera Odorrana and Eburana. Among them, R. ishikawae and the R. narina complex represent the northernmost members occurring from Taiwan to the Ryukyu Archipelago of Japan. Relationships of these frogs with the continental members, as well as the history of their invasions to islands, have been unclear. The taxonomic status of Odorrana and related genera varies among authors and no phylogenetic reassessment has been done. Using partial sequences of mitochondrial 12S and 16S rRNA genes, we estimated phylogenetic relationships among 17 species of the section Hylarana including Odorrana and Eburana, and related species from the Ryukyus, Taiwan, China, Thailand, Malaysia, and Indonesia. We estimate that (1) Odorrana is monophyletic and encom- passes species of Eburana and R. hosii, which is now placed in Chalcorana, (2) the ancestor of R. -
A Novel Kunitzin-Like Trypsin Inhibitor Isolated from Defensive Skin Secretion of Odorrana Versabilis
biomolecules Article A Novel Kunitzin-Like Trypsin Inhibitor Isolated from Defensive Skin Secretion of Odorrana versabilis 1, 2, 1 1 1, 1 Yanjing Dong y, Daning Shi y, Yuan Ying , Xinping Xi , Xiaoling Chen *, Lei Wang , Mei Zhou 1 , Qinan Wu 3, Chengbang Ma 1,* and Tianbao Chen 1 1 Natural Drug Discovery Group, School of Pharmacy, Queen’s University Belfast, Belfast BT9 7BL, UK 2 School of Government, Peking University, No 114, The Leo KoGuan Building, Beijing 100871, China 3 College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China * Correspondence: [email protected] (X.C.); [email protected] (C.M.); Tel.: +44-28-9097-1674 (X.C.); +44-28-9097-1678 (C.M.) These authors contributed equally to this work. y Received: 27 May 2019; Accepted: 27 June 2019; Published: 28 June 2019 Abstract: Protease inhibitors that were identified from amphibian skin secretions with low molecular weights and potent inhibitory activity were thought to be potential candidates for novel peptide drugs. Here, a novel peptide with trypsin inhibitory activity was found in the skin secretion of the Chinese bamboo leaf odorous frog, Odorrana versabilis. Based on the sequence alignments of sequencing results, the novel peptide (ALKYPFRCKAAFC) was named as Kunitzin-OV. The synthetic replicate of Kunitzin-OV was subjected to a series of functional assays, and it exhibited a trypsin inhibitory activity with a Ki value of 3.042 µM, whereas, when Lys-9 at P1 position was substituted by Phe, trypsin inhibitory activity was undetected and the chymotrypsin inhibitory activity was optimized with a Ki value of 2.874 µM.