First Oligocene Records of Calyptogena (Bivalvia: Vesicomyidae) By
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DOGAMI Open-File Report O-86-06, the State of Scientific
"ABLE OF CONTENTS Page INTRODUCTION ..~**********..~...~*~~.~...~~~~1 GORDA RIDGE LEASE AREA ....................... 2 RELATED STUDIES IN THE NORTH PACIFIC .+,...,. 5 BYDROTHERMAL TEXTS ........................... 9 34T.4 GAPS ................................... r6 ACKNOWLEDGEMENT ............................. I8 APPENDIX 1. Species found on the Gorda Ridge or within the lease area . .. .. .. .. .. 36 RPPENDiX 2. Species found outside the lease area that may occur in the Gorda Ridge Lease area, including hydrothermal vent organisms .................................55 BENTHOS THE STATE OF SCIENTIFIC INFORMATION RELATING TO THE BIOLOGY AND ECOLOGY 3F THE GOUDA RIDGE STUDY AREA, NORTZEAST PACIFIC OCEAN: INTRODUCTION Presently, only two published studies discuss the ecology of benthic animals on the Gorda Sidge. Fowler and Kulm (19701, in a predominantly geolgg isal study, used the presence of sublittor31 and planktsnic foraminiferans as an indication of uplift of tfie deep-sea fioor. Their resuits showed tiac sedinenta ana foraminiferans are depositea in the Zscanaba Trough, in the southern part of the Corda Ridge, by turbidity currents with a continental origin. They list 22 species of fararniniferans from the Gorda Rise (See Appendix 13. A more recent study collected geophysical, geological, and biological data from the Gorda Ridge, with particular emphasis on the northern part of the Ridge (Clague et al. 19843. Geological data suggest the presence of widespread low-temperature hydrothermal activity along the axf s of the northern two-thirds of the Corda 3idge. However, the relative age of these vents, their present activity and presence of sulfide deposits are currently unknown. The biological data, again with an emphasis on foraminiferans, indicate relatively high species diversity and high density , perhaps assoc iated with widespread hydrotheraal activity. -
Benthic Data Sheet
DEMERSAL OTTER/BEAM TRAWL DATA SHEET RESEARCH VESSEL_____________________(1/20/13 Version*) CLASS__________________;DATE_____________;NAME:___________________________; DEVICE DETAILS_________ LOCATION (OVERBOARD): LAT_______________________; LONG______________________________ LOCATION (AT DEPTH): LAT_______________________; LONG_____________________________; DEPTH___________ LOCATION (START UP): LAT_______________________; LONG______________________________;.DEPTH__________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ TIME: IN______AT DEPTH_______START UP_______SURFACE_______.DURATION OF TRAWL________; SHIP SPEED__________; WEATHER__________________; SEA STATE__________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_______________________________ INVERTEBRATES Phylum Porifera Order Pennatulacea (sea pens) Class Calcarea __________________________________ Family Stachyptilidae Class Demospongiae (Vase sponge) _________________ Stachyptilum superbum_____________________ Class Hexactinellida (Hyalospongia- glass sponge) Suborder Subsessiliflorae Subclass Hexasterophora Family Pennatulidae Order Hexactinosida Ptilosarcus gurneyi________________________ Family Aphrocallistidae Family Virgulariidae Aphrocallistes vastus ______________________ Acanthoptilum sp. ________________________ Other__________________________________________ Stylatula elongata_________________________ Phylum Cnidaria (Coelenterata) Virgularia sp.____________________________ Other_______________________________________ -
Haemoglobin Structure and Biochemical Characteristics of the Sulphide-Binding Component from the Deep-Sea Clam Calyptogena Magnifica
Cah. Biol. Mar. (2000) 41 : 413-423 Haemoglobin structure and biochemical characteristics of the sulphide-binding component from the deep-sea clam Calyptogena magnifica Franck ZAL1,2*, Emmanuelle LEIZE3, Daniel R. Oros1, Stéphane HOURDEZ2, Alain Van DORSSELAER3 and James J. CHILDRESS1 1 Department of Biological Sciences and Marine Science Institute, University of California, Santa Barbara, CA 93106, USA Present address : 2* Equipe Ecophysiologie, UPMC - CNRS - INSU, Station Biologique, BP 74, 29682 Roscoff Cedex, France 3 Laboratoire de Spectrométrie de Masse Bio-Organique, Université Louis Pasteur-CNRS URA 31, Institut de Chimie, 1 rue Blaise Pascal, 67008 Strasbourg Cedex, France Abstract: Calyptogena magnifica is a large heterodont clam belonging to the family vesicomyidae that lives at a depth of ca. 2600 m, near deep-sea hydrothermal vent areas on the East-Pacific Rise and Galapagos Rift. This species harbors abundant autotrophic sulphide-oxidizing bacteria contained in bacteriocytes and located in the gills. Unlike the tube-worm Riftia pachyptila, which possesses extracellular haemoglobins that bind sulphide and oxygen simultaneously and reversibly at two different sites, Calyptogena magnifica possesses in its haemolymph two different types of molecules for these functions: an intracellular circulating haemoglobin (Hb) for oxygen binding and a sulphide-binding component (SBC) dissolved in the serum. To elucidate its quaternary structure, the haemoglobin was purified by gel chromatography (FPLC) and then analysed by electrospray ionization mass spectrometry (ESI-MS). FPLC analysis revealed a molecular mass of approximately 68 kDa. By mass spectrometry, under native condition, we found that this molecule contains two subunits of molecular masses 16134.0 Da (α) and 32513.1 Da (βγ). -
Patterns of Genome Size Diversity in Invertebrates
PATTERNS OF GENOME SIZE DIVERSITY IN INVERTEBRATES: CASE STUDIES ON BUTTERFLIES AND MOLLUSCS A Thesis Presented to The Faculty of Graduate Studies of The University of Guelph by PAOLA DIAS PORTO PIEROSSI In partial fulfilment of requirements For the degree of Master of Science April, 2011 © Paola Dias Porto Pierossi, 2011 Library and Archives Bibliotheque et 1*1 Canada Archives Canada Published Heritage Direction du Branch Patrimoine de I'edition 395 Wellington Street 395, rue Wellington Ottawa ON K1A 0N4 Ottawa ON K1A 0N4 Canada Canada Your file Votre reference ISBN: 978-0-494-82784-0 Our file Notre reference ISBN: 978-0-494-82784-0 NOTICE: AVIS: The author has granted a non L'auteur a accorde une licence non exclusive exclusive license allowing Library and permettant a la Bibliotheque et Archives Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par telecommunication ou par I'lnternet, preter, telecommunication or on the Internet, distribuer et vendre des theses partout dans le loan, distribute and sell theses monde, a des fins commerciales ou autres, sur worldwide, for commercial or non support microforme, papier, electronique et/ou commercial purposes, in microform, autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriete du droit d'auteur ownership and moral rights in this et des droits moraux qui protege cette these. Ni thesis. Neither the thesis nor la these ni des extraits substantiels de celle-ci substantial extracts from it may be ne doivent etre imprimes ou autrement printed or otherwise reproduced reproduits sans son autorisation. -
Abbreviation Kiel S. 2005, New and Little Known Gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar
1 Reference (Explanations see mollusca-database.eu) Abbreviation Kiel S. 2005, New and little known gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar. AF01 http://www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/ForschungImadagaskar.htm (11.03.2007, abstract) Bandel K. 2003, Cretaceous volutid Neogastropoda from the Western Desert of Egypt and their place within the noegastropoda AF02 (Mollusca). Mitt. Geol.-Paläont. Inst. Univ. Hamburg, Heft 87, p 73-98, 49 figs., Hamburg (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Kiel S. & Bandel K. 2003, New taxonomic data for the gastropod fauna of the Uzamba Formation (Santonian-Campanian, South AF03 Africa) based on newly collected material. Cretaceous research 24, p. 449-475, 10 figs., Elsevier (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Emberton K.C. 2002, Owengriffithsius , a new genus of cyclophorid land snails endemic to northern Madagascar. The Veliger 45 (3) : AF04 203-217. http://www.theveliger.org/index.html Emberton K.C. 2002, Ankoravaratra , a new genus of landsnails endemic to northern Madagascar (Cyclophoroidea: Maizaniidae?). AF05 The Veliger 45 (4) : 278-289. http://www.theveliger.org/volume45(4).html Blaison & Bourquin 1966, Révision des "Collotia sensu lato": un nouveau sous-genre "Tintanticeras". Ann. sci. univ. Besancon, 3ème AF06 série, geologie. fasc.2 :69-77 (Abstract). www.fossile.org/pages-web/bibliographie_consacree_au_ammon.htp (20.7.2005) Bensalah M., Adaci M., Mahboubi M. & Kazi-Tani O., 2005, Les sediments continentaux d'age tertiaire dans les Hautes Plaines AF07 Oranaises et le Tell Tlemcenien (Algerie occidentale). -
Vesicomyinae (Bivalvia Vesicomyidae) of the Kuril
Deep-Sea Research II ∎ (∎∎∎∎) ∎∎∎–∎∎∎ Contents lists available at ScienceDirect Deep-Sea Research II journal homepage: www.elsevier.com/locate/dsr2 Vesicomyinae (Bivalvia: Vesicomyidae) of the Kuril–Kamchatka Trench and adjacent abyssal regions Elena M. Krylova a,n, Gennady M. Kamenev b, Irina P. Vladychenskaya c, Nikolai B. Petrov c a P.P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Nakhimovsky Prospekt, 36, Moscow 117997, Russia b A.V. Zhirmunsky Institute of Marine Biology FEB RAS, Palchevskogo St., 17, Vladivostok 690041, Russia c A.N.Belozersky Institute of Physico-Chemical Biology MSU, Leninskie Gory, 1-40, Moscow 119992, Russia abstract Keywords: Abyssal Representatives of the subfamily Vesicomyinae (Bivalvia, Vesicomyidae) are tiny deep-sea molluscs Deep-sea trench distributed worldwide and reaching huge abundances of hundreds and thousands of specimens in trawl COI catches. During the German–Russian deep-sea expedition KuramBio (R/V Sonne, 2012) for the first time Morphology two vesicomyin species were collected from the abyssal plain adjacent to the Kuril–Kamchatka Trench New species from the depths of 4861–5787 m, Vesicomya pacifica (Smith, 1885) and “Vesicomya” filatovae sp.n. Two Northwestern Pacific Vesicomya species of vesicomyins, V. sergeevi Filatova, 1971 and V. profundi Filatova, 1971, which were previously reported from the hadal of the Kuril–Kamchatka Trench, were not collected at the abyssal depth despite of the close geographical proximity of the sampling area to their distribution ranges. Altogether nine species of vesicomyins are recorded now from the West and Indo-West Pacific; data on distribution and morpho-anatomical characters of these species are provided. Taxonomic description of V. -
The Smaller Vesicomyid Bivalves in the Genus Isorropodon (Bivalvia, Vesicomyidae, Pliocardiinae) Also Harbour Chemoautotrophic Symbionts
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repositório Institucional da Universidade de Aveiro Symbiosis (2012) 56:129–137 DOI 10.1007/s13199-012-0168-0 The smaller vesicomyid bivalves in the genus Isorropodon (Bivalvia, Vesicomyidae, Pliocardiinae) also harbour chemoautotrophic symbionts Clara F. Rodrigues & Marina R. Cunha & Karine Olu & Sébastien Duperron Received: 9 March 2012 /Accepted: 11 May 2012 /Published online: 25 May 2012 # Springer Science+Business Media B.V. 2012 Abstract Species of Isorropodon are vesicomyid bivalves 1 Introduction for which little information is available regarding host phy- logeny and bacterial symbioses. In this study we investigat- Vesicomyidae clams are among the dominant metazoan ed the symbioses in three Isorropodon species from three fauna in deep-sea sulphide-rich habitats (e.g. hydrothermal cold seep areas: Isorropodon bigoti (Gulf of Guinea), Iso- vents, cold seeps, whale carcasses) and occur worldwide rropodon megadesmus (GulfofCadiz)andIsorropodon from 77°N to 70°S at depths from 100 to 9,050 m (Krylova perplexum (Eastern Mediterranean). Analysis of bacterial and Sahling 2010). Genera within the subfamily Pliocardii- 16S ribosomal RNA gene sequences demonstrated that each nae (considered large-sized vesicomyids, with shell lengths vesicomyid species harbours a single symbiont phylotype, in the range of 1 to 30 cm) display distinctive shared that symbionts from the three species cluster together, and features including reduced gut and feeding groove, indicat- that they are closely related to other known vesicomyid ing a large dependence upon (intracellular) chemoautotro- symbionts. These results are confirmed by other marker phic bacteria for their nutrition (Krylova and Sahling 2010). -
Large Vesicomyidae (Mollusca: Bivalvia) from Cold Seeps in the Gulf
Deep Sea Research Part II: Topical Studies in Archimer Oceanography Archive Institutionnelle de l’Ifremer November 2009, Volume 56, Issue 23, Pages 2350-2379 http://www.ifremer.fr/docelec/ http://dx.doi.org/10.1016/j.dsr2.2009.04.016 © 2009 Elsevier Ltd All rights reserved. Large Vesicomyidae (Mollusca: Bivalvia) from cold seeps in the Gulf of ailable on the publisher Web site Guinea off the coasts of Gabon, Congo and northern Angola Rudo von Cosela, * and Karine Olub, * a Muséum National d’Histoire Naturelle, Département Systématique et Evolution, USM 602 – Taxonomie – Collections, UMS 2700 CNRS, 55, Rue Buffon, 75005 Paris, France b IFREMER Centre de Brest, Département Etude des Ecosystèmes Profonds, BP 70, 29280 Plouzane, France *: Corresponding author : R. von Cosel, email address : [email protected], K. Olu, email address : [email protected] blisher-authenticated version is av Abstract: Two new genera and three new species of large Vesicomyidae are described from cold-seep sites on pockmarks and other sulfide-rich environments in the Gulf of Guinea (tropical east Atlantic) off Gabon, Congo (Brazzaville) and northern Angola, from 500 to 4000 m depth: “Calyptogena” (s.l.) regab n. sp., Wareniconcha (n.g.) guineensis (Thiele and Jaeckel 1931), Elenaconcha guiness n.g. n. sp., and Isorropodon atalantae n. sp. For two other species already taken by the R/V Valdivia in 1898, Calyptogena valdiviae (Thiele and Jaeckel 1931) and Isorropodon striatum (Thiele and Jaeckel 1931) new localities were discovered, and the species are rediscussed. E. guiness n.g. n.sp. is also recorded from off Banc d’Arguin, Mauritania, collected by commercial fishing vessels. -
Bioaccumulation of Some Trace Elements in the Biota Of
Bioaccumulation of some trace elements in the biota of hydrothermal fields of the Guaymas Basin (Gulf of California) 1 BOLETÍN DE LA SOCIEDAD GEOLÓ G ICA MEXICANA VOLU M EN 61, NÚ M . 1, 2009, P. 1-12 D GEOL DA Ó E G I I C C O A S 1904 M 2004 . C EX . ICANA A C i e n A ñ o s Bioaccumulation of some trace elements in the biota of hydrothermal fields of the Guaymas Basin (Gulf of California) Ludmila L. Demina1,*, Sergey V. Galkin1 and Evgueni N. Shumilin2 1 P.P.Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia 2 Centro Interdisciplinario de Ciencias Marinas, Avenida IPN s/n, Col. Playa Palo de Santa Rita, Apartado Postal 592, La Paz, Baja California Sur, 23096, Mexico * [email protected] Abstract Data from the hydrothermally influenced Guaymas Basin of the Gulf of California are presented on the concentration and distribution of As, Ag, Au, Ba, Cd, Co, Cr, Cu, Fe, Hg, Mn, Pb, Sb, Se, and Zn in different tissues of dominant hydrothermal vent animals such as vestimentifera Riftia pachyptila and vesicomyid clams Archivestica gigas (Calyptogena) and other organisms, including Spongia, bivalve mollusks Leda (Nuculana grasslei), Actiniaria, and crab Munidopsis. Chemical element content was measured by atomic absorption spectrometry (flame and graphite furnace methods) and instrumental neutron activation analysis. In the dominant specialized taxa, the main target organs of metals were the trophosome and obturaculae of Riftia pachyptila, the gills and mantle of Archivestica gigas (Calyptogena). The other organisms also demonstrated high bioaccumulation of metals. -
Dense Transcriptome Sampling Drastically Improves the Bivalve Tree of Life
Resolving the relationships of clams and royalsocietypublishing.org/journal/rspb cockles: dense transcriptome sampling drastically improves the bivalve tree of life Sarah Lemer1,2,Ru¨diger Bieler3 and Gonzalo Giribet2 Research 1University of Guam Marine Laboratory, 303 University Drive, UOG Station, Mangilao, GU 96923, USA 2 Cite this article: Lemer S, Bieler R, Giribet G. Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA 2019 Resolving the relationships of clams and 3Integrative Research Center, Field Museum of Natural History, 1400 South Lake Shore Drive, Chicago, cockles: dense transcriptome sampling IL 60605, USA drastically improves the bivalve tree of life. SL, 0000-0003-0048-7296 Proc. R. Soc. B 286: 20182684. http://dx.doi.org/10.1098/rspb.2018.2684 Bivalvia has been the subject of extensive recent phylogenetic work to attempt resolving either the backbone of the bivalve tree using transcriptomic data, or the tips using morpho-anatomical data and up to five genetic markers. Yet the first approach lacked decisive taxon sampling and the second failed to resolve Received: 27 November 2018 many interfamilial relationships, especially within the diverse clade Impari- Accepted: 11 January 2019 dentia. Here we combine dense taxon sampling with 108 deep-sequenced Illumina-based transcriptomes to provide resolution in nodes that required additional study. We designed specific data matrices to address the poorly resolved relationships within Imparidentia. Our results support the overall backbone of the bivalve tree, the monophyly of Bivalvia and all its main Subject Category: nodes, although the monophyly of Protobranchia remains less clear. -
Bioaccumulation of Some Trace Elements in the Biota of Hydrothermal Fields of the Guaymas Basin (Gulf of California) 31 Boletín De La Sociedad Geológica Mexicana
Bioaccumulation of some trace elements in the biota of hydrothermal fields of the Guaymas Basin (Gulf of California) 31 BOLETÍN DE LA SOCIEDAD GEOLÓGICA MEXICANA VOLUMEN 61, NÚM. 1, 2009, P. 31-45 D GEOL DA Ó E G I I C C O A S 1904 M 2004 . C EX . ICANA A C i e n A ñ o s Bioaccumulation of some trace elements in the biota of hydrothermal fields of the Guaymas Basin (Gulf of California) Ludmila L. Demina1,*, Sergey V. Galkin1 and Evgueni N. Shumilin2 1 P.P.Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia 2 Centro Interdisciplinario de Ciencias Marinas, Avenida IPN s/n, Col. Playa Palo de Santa Rita, Apartado Postal 592, La Paz, Baja California Sur, 23096, Mexico * [email protected] Abstract Data from the hydrothermally influenced Guaymas Basin of the Gulf of California are presented on the concentration and distribution of Ag, As, Au, Ba, Cd, Co, Cr, Cu, Fe, Hg, Mn, Pb, Sb, Se, and Zn in different tissues of dominant hydrothermal vent animals such as vestimentifera Riftia pachyptila and vesicomyid clams Archivesica gigas and other organisms, including Spongia, bivalve mollusks Nuculana grasslei, Phelliactis pabista, and crab Munidopsis alvisca. Chemical element content was measured by atomic absorption spectrometry (flame and graphite furnace methods) and instrumental neutron activation analysis. In the dominant specialized taxa, the main target organs of metals were the trophosome and obturaculae of Riftia pachyptila, the gills and mantle of Archivesica gigas. The other organisms also demonstrated high bioaccumulation of metals. Especially high levels of most of the metals (excluding Mn) were detected in the soft body of Nuculana grasslei. -
Amathys Lutzi
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Denisia Jahr/Year: 2006 Band/Volume: 0018 Autor(en)/Author(s): Cosel von Rudo Artikel/Article: Mollusca, Bivalvia 141-172 © Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Mollusca, Bivalvia The Solemyidae are represented at hydrothermal vent or carbon seeps or hydrothermal vents. In the past, species of Vesi- cold seep biotopes by the genus Acharax. Eight named species comyidae have been assigned to different genera or subgenera as well as several still unnamed species are known, but only a and many of the large species are now commonly placed in the single species has been collected at hydrothermal vents (Lau genus Calyptogena (sensu lato). Recently however, some au- Back-Arc Basin). Representatives of this genus can grow to rel- thors have revised tentatively all Vesicomyidae in the sole atively large sizes between 10 and 22 cm. They live deeply genus Vesicomya (in a broad sense) pending future supra-specif- buried in soft sediment. At least some species are characterized ic revisions based mainly on molecular research. Anyway, shell by the absence of a digestive tract, and their nourishment relies and soft part morphology remain important and key characters exclusively on their chemosynthetic symbiotic bacteria. are among others hinge dentition, shell size and shape and pres- Of the large mussels living at hydrothermal vents or cold ence or absence of a well-developed pallial sinus. Herein, the seeps, 20 species have been currently described, 18 of them in genus Calyptogena is maintained. The assignment of a vesi- the genus Bathymodiolus.