Vesicomyinae (Bivalvia Vesicomyidae) of the Kuril
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DOGAMI Open-File Report O-86-06, the State of Scientific
"ABLE OF CONTENTS Page INTRODUCTION ..~**********..~...~*~~.~...~~~~1 GORDA RIDGE LEASE AREA ....................... 2 RELATED STUDIES IN THE NORTH PACIFIC .+,...,. 5 BYDROTHERMAL TEXTS ........................... 9 34T.4 GAPS ................................... r6 ACKNOWLEDGEMENT ............................. I8 APPENDIX 1. Species found on the Gorda Ridge or within the lease area . .. .. .. .. .. 36 RPPENDiX 2. Species found outside the lease area that may occur in the Gorda Ridge Lease area, including hydrothermal vent organisms .................................55 BENTHOS THE STATE OF SCIENTIFIC INFORMATION RELATING TO THE BIOLOGY AND ECOLOGY 3F THE GOUDA RIDGE STUDY AREA, NORTZEAST PACIFIC OCEAN: INTRODUCTION Presently, only two published studies discuss the ecology of benthic animals on the Gorda Sidge. Fowler and Kulm (19701, in a predominantly geolgg isal study, used the presence of sublittor31 and planktsnic foraminiferans as an indication of uplift of tfie deep-sea fioor. Their resuits showed tiac sedinenta ana foraminiferans are depositea in the Zscanaba Trough, in the southern part of the Corda Ridge, by turbidity currents with a continental origin. They list 22 species of fararniniferans from the Gorda Rise (See Appendix 13. A more recent study collected geophysical, geological, and biological data from the Gorda Ridge, with particular emphasis on the northern part of the Ridge (Clague et al. 19843. Geological data suggest the presence of widespread low-temperature hydrothermal activity along the axf s of the northern two-thirds of the Corda 3idge. However, the relative age of these vents, their present activity and presence of sulfide deposits are currently unknown. The biological data, again with an emphasis on foraminiferans, indicate relatively high species diversity and high density , perhaps assoc iated with widespread hydrotheraal activity. -
Benthic Data Sheet
DEMERSAL OTTER/BEAM TRAWL DATA SHEET RESEARCH VESSEL_____________________(1/20/13 Version*) CLASS__________________;DATE_____________;NAME:___________________________; DEVICE DETAILS_________ LOCATION (OVERBOARD): LAT_______________________; LONG______________________________ LOCATION (AT DEPTH): LAT_______________________; LONG_____________________________; DEPTH___________ LOCATION (START UP): LAT_______________________; LONG______________________________;.DEPTH__________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ TIME: IN______AT DEPTH_______START UP_______SURFACE_______.DURATION OF TRAWL________; SHIP SPEED__________; WEATHER__________________; SEA STATE__________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_______________________________ INVERTEBRATES Phylum Porifera Order Pennatulacea (sea pens) Class Calcarea __________________________________ Family Stachyptilidae Class Demospongiae (Vase sponge) _________________ Stachyptilum superbum_____________________ Class Hexactinellida (Hyalospongia- glass sponge) Suborder Subsessiliflorae Subclass Hexasterophora Family Pennatulidae Order Hexactinosida Ptilosarcus gurneyi________________________ Family Aphrocallistidae Family Virgulariidae Aphrocallistes vastus ______________________ Acanthoptilum sp. ________________________ Other__________________________________________ Stylatula elongata_________________________ Phylum Cnidaria (Coelenterata) Virgularia sp.____________________________ Other_______________________________________ -
New Records of Non-Indigenous Molluscs from the Eastern Mediterranean Sea
BioInvasions Records (2018) Volume 7, Issue 3: 245–257 Open Access DOI: https://doi.org/10.3391/bir.2018.7.3.05 © 2018 The Author(s). Journal compilation © 2018 REABIC Research Article New records of non-indigenous molluscs from the eastern Mediterranean Sea Jan Steger1,*, Martina Stockinger1, Angelina Ivkić1,2, Bella S. Galil3 and Paolo G. Albano1 1Department of Palaeontology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria 2Faculty of Geosciences, Utrecht University, Princetonlaan 8a, 3584 CB Utrecht, The Netherlands 3The Steinhardt Museum of Natural History, Israel National Center for Biodiversity Studies, Tel Aviv University, Tel Aviv 69978, Israel Author e-mails: [email protected] (JS), [email protected] (MS), [email protected] (AI), [email protected] (BSG), [email protected] (PGA) *Corresponding author Received: 15 June 2018 / Accepted: 11 July 2018 / Published online: 2 August 2018 Handling editor: Fred Wells Abstract We report new findings of non-indigenous Indo-Pacific molluscs from shallow water habitats off Israel, Greece and Egypt, eastern Mediterranean Sea. The bivalves Pillucina vietnamica Zorina, 1978 and Alveinus miliaceus (Issel, 1869) were collected from sandy bottoms off Israel, whereas Gregariella cf. ehrenbergi (Issel, 1869) was recovered from a buoy originating from Port Said, Egypt, and stranded on the Israeli coast. The three species are first records for the Mediterranean Sea. Additionally, we report range extensions for several gastropods: Varicopeza pauxilla (A. Adams, 1855) is recorded from Israel, Phidiana militaris (Alder and Hancock, 1864) from southern Israel (Ashqelon), and Viriola cf. bayani Jousseaume, 1884 from Israel and Crete. Shells and valves of an unidentified lucinid bivalve morphologically distinct from any known Mediterranean species were found along the Israeli Mediterranean shore. -
Haemoglobin Structure and Biochemical Characteristics of the Sulphide-Binding Component from the Deep-Sea Clam Calyptogena Magnifica
Cah. Biol. Mar. (2000) 41 : 413-423 Haemoglobin structure and biochemical characteristics of the sulphide-binding component from the deep-sea clam Calyptogena magnifica Franck ZAL1,2*, Emmanuelle LEIZE3, Daniel R. Oros1, Stéphane HOURDEZ2, Alain Van DORSSELAER3 and James J. CHILDRESS1 1 Department of Biological Sciences and Marine Science Institute, University of California, Santa Barbara, CA 93106, USA Present address : 2* Equipe Ecophysiologie, UPMC - CNRS - INSU, Station Biologique, BP 74, 29682 Roscoff Cedex, France 3 Laboratoire de Spectrométrie de Masse Bio-Organique, Université Louis Pasteur-CNRS URA 31, Institut de Chimie, 1 rue Blaise Pascal, 67008 Strasbourg Cedex, France Abstract: Calyptogena magnifica is a large heterodont clam belonging to the family vesicomyidae that lives at a depth of ca. 2600 m, near deep-sea hydrothermal vent areas on the East-Pacific Rise and Galapagos Rift. This species harbors abundant autotrophic sulphide-oxidizing bacteria contained in bacteriocytes and located in the gills. Unlike the tube-worm Riftia pachyptila, which possesses extracellular haemoglobins that bind sulphide and oxygen simultaneously and reversibly at two different sites, Calyptogena magnifica possesses in its haemolymph two different types of molecules for these functions: an intracellular circulating haemoglobin (Hb) for oxygen binding and a sulphide-binding component (SBC) dissolved in the serum. To elucidate its quaternary structure, the haemoglobin was purified by gel chromatography (FPLC) and then analysed by electrospray ionization mass spectrometry (ESI-MS). FPLC analysis revealed a molecular mass of approximately 68 kDa. By mass spectrometry, under native condition, we found that this molecule contains two subunits of molecular masses 16134.0 Da (α) and 32513.1 Da (βγ). -
A Phylogenetic Backbone for Bivalvia: an RNA-Seq Approach
A phylogenetic backbone for Bivalvia: an RNA-seq approach The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation González, Vanessa L., Sónia C. S. Andrade, Rüdiger Bieler, Timothy M. Collins, Casey W. Dunn, Paula M. Mikkelsen, John D. Taylor, and Gonzalo Giribet. 2015. “A phylogenetic backbone for Bivalvia: an RNA-seq approach.” Proceedings of the Royal Society B: Biological Sciences 282 (1801): 20142332. doi:10.1098/rspb.2014.2332. http:// dx.doi.org/10.1098/rspb.2014.2332. Published Version doi:10.1098/rspb.2014.2332 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:14065405 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A phylogenetic backbone for Bivalvia: an rspb.royalsocietypublishing.org RNA-seq approach Vanessa L. Gonza´lez1,†,So´nia C. S. Andrade1,‡,Ru¨diger Bieler2, Timothy M. Collins3, Casey W. Dunn4, Paula M. Mikkelsen5, Research John D. Taylor6 and Gonzalo Giribet1 1 Cite this article: Gonza´lez VL, Andrade SCS, Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA Bieler R, Collins TM, Dunn CW, Mikkelsen PM, 2Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605, USA Taylor JD, Giribet G. 2015 A phylogenetic 3Department of Biological Sciences, Florida International University, Miami, FL 33199, USA backbone for Bivalvia: an RNA-seq approach. -
Paleogene Marine Bivalves of the Deep-Water Keasey Formation in Oregon, Part IV: the Anomalodesmatans
UC Berkeley PaleoBios Title Paleogene marine bivalves of the deep-water Keasey Formation in Oregon, part IV: The anomalodesmatans Permalink https://escholarship.org/uc/item/6vf3t60q Journal PaleoBios, 31(3) ISSN 0031-0298 Author Hickman, Carole S. Publication Date 2014-12-16 DOI 10.5070/P9313025099 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Peer Reviewed Title: Paleogene marine bivalves of the deep-water Keasey Formation in Oregon, part IV: The anomalodesmatans Journal Issue: PaleoBios, 31(3) Author: Hickman, Carole S., University of California Publication Date: 2014 Permalink: http://escholarship.org/uc/item/6vf3t60q Acknowledgements: Documentation of the Keasey bivalve fauna would not have been possible without the encouragement of the late Harold Vokes, who generously turned over the specimens and considerable research effort he originally invested in anticipation of publishing monographic treatments of mollusks of the Keasey Formation. For collecting assistance in the field, I am grateful to James C. Hickman and to the following undergraduate students from the 1979 invertebrate paleontology class at the University of Oregon: Janet Baldridge, Les Boyer, Scott Larson, Greg Miles, Gordy Miller, Diane Searcy, Gary Smith, and Barbara Zeller. Digital photography of specimens illustrated in color is the work of UCMP photographer and Associate Dave Strauss, and the exceptional quality of his morphological documentation of specimens is the most important single contribution to this monographic treatment. Micrographs of very small transparent shells were recorded digitally with the Hitachi S-r800 Field Emission Scanning Electron Microscope at the Biological Scanning Electron Microscope Facility of the University of Hawaii with advice and assistance from Tina Weatherby Carvalho. -
Pursuing the Quest for Better Understanding the Taxonomic Distribution of the System of Doubly Uniparental Inheritance of Mtdna
Pursuing the quest for better understanding the taxonomic distribution of the system of doubly uniparental inheritance of mtDNA Arthur Gusman1, Sophia Lecomte2, Donald T. Stewart3, Marco Passamonti4 and Sophie Breton1 1 Department of Biological Sciences, Université de Montréal, Montréal, Québec, Canada 2 Department of Biological Sciences, Université de Strasbourg, Strasbourg, France 3 Department of Biology, Acadia University, Wolfville, Nova Scotia, Canada 4 Department of Biological Geological and Environmental Sciences, University of Bologna, Bologna, Italy ABSTRACT There is only one exception to strict maternal inheritance of mitochondrial DNA (mtDNA) in the animal kingdom: a system named doubly uniparental inheritance (DUI), which is found in several bivalve species. Why and how such a radically different system of mitochondrial transmission evolved in bivalve remains obscure. Obtaining a more complete taxonomic distribution of DUI in the Bivalvia may help to better understand its origin and function. In this study we provide evidence for the presence of sex-linked heteroplasmy (thus the possible presence of DUI) in two bivalve species, i.e., the nuculanoid Yoldia hyperborea (Gould, 1841) and the veneroid Scrobicularia plana (Da Costa, 1778), increasing the number of families in which DUI has been found by two. An update on the taxonomic distribution of DUI in the Bivalvia is also presented. Subjects Biodiversity, Evolutionary Studies, Genetics, Marine Biology, Zoology Keywords Mitochondrial DNA, Doubly uniparental inheritance, Bivalvia, Mitochondrial inheritance, Yoldia hyperborea, Scrobicularia plana Submitted 4 September 2016 Accepted 5 November 2016 Published 13 December 2016 INTRODUCTION Corresponding author Sophie Breton, Strict maternal inheritance (SMI) is considered to be the paradigm for mitochondrial DNA [email protected] (mtDNA) transmission in animal species (Birky, 2001). -
Deep-Sea Life Issue 10, November 2017 Cruise News
Deep-Sea Life Issue 10, November 2017 Here we are at Issue 10 of Deep-Sea Life, and gone are the days of having to chase around for articles to include! The life of a Deep-Sea Life editor is far easier these days and for that I thank you all! For those readers new to this publication, DSL is an informal and somewhat traditional way of connecting the world of deep-sea biology and related issues – best read with a cup or glass of something soothing, feet up. Traditional yes, but we still like to embrace change! There are plans afoot for Deep-Sea Life issue 11 and we hereby give you a heads-up. INDEEP, DOSI and the Deep-Sea Biology Society (DSBS), although very distinct groups and complimentary in many ways, have one clear overlapping activity – that of communication. Whilst it is clear that each entity warrants its own website, and (perhaps - TBD) social media outlets, the INDEEP newsletter (Deep-Sea Life) and email lists that have been established firstly during the Census of Marine Life and built upon during INDEEP, DOSI and subsequently DSBS are a highly valuable Above: Bathymodoilus childressi, Alvinocaris c.f. muricola, Pachycara caribbaeum and Gastropod Sp.1 found at deep methane seeps off Trinidad and Tobago. form of communication for well over 1000 members and Credit: Ocean Exploration Trust. to interest groups beyond. Currently, DSL is distributed via website link to a printable PDF. With additional production support from DSBS Trustees, DSL could be enhanced in terms of its production to embrace additional formats. -
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources http://www.dnr.sc.gov/marine/sertc/ Southeastern Regional Taxonomic Center Invertebrate Literature Library (updated 9 May 2012, 4056 entries) (1958-1959). Proceedings of the salt marsh conference held at the Marine Institute of the University of Georgia, Apollo Island, Georgia March 25-28, 1958. Salt Marsh Conference, The Marine Institute, University of Georgia, Sapelo Island, Georgia, Marine Institute of the University of Georgia. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Caprellidea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Gammaridea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1981). Stomatopods. FAO species identification sheets for fishery purposes. Eastern Central Atlantic; fishing areas 34,47 (in part).Canada Funds-in Trust. Ottawa, Department of Fisheries and Oceans Canada, by arrangement with the Food and Agriculture Organization of the United Nations, vols. 1-7. W. Fischer, G. Bianchi and W. B. Scott. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume II. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume III. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. -
Patterns of Genome Size Diversity in Invertebrates
PATTERNS OF GENOME SIZE DIVERSITY IN INVERTEBRATES: CASE STUDIES ON BUTTERFLIES AND MOLLUSCS A Thesis Presented to The Faculty of Graduate Studies of The University of Guelph by PAOLA DIAS PORTO PIEROSSI In partial fulfilment of requirements For the degree of Master of Science April, 2011 © Paola Dias Porto Pierossi, 2011 Library and Archives Bibliotheque et 1*1 Canada Archives Canada Published Heritage Direction du Branch Patrimoine de I'edition 395 Wellington Street 395, rue Wellington Ottawa ON K1A 0N4 Ottawa ON K1A 0N4 Canada Canada Your file Votre reference ISBN: 978-0-494-82784-0 Our file Notre reference ISBN: 978-0-494-82784-0 NOTICE: AVIS: The author has granted a non L'auteur a accorde une licence non exclusive exclusive license allowing Library and permettant a la Bibliotheque et Archives Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par telecommunication ou par I'lnternet, preter, telecommunication or on the Internet, distribuer et vendre des theses partout dans le loan, distribute and sell theses monde, a des fins commerciales ou autres, sur worldwide, for commercial or non support microforme, papier, electronique et/ou commercial purposes, in microform, autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriete du droit d'auteur ownership and moral rights in this et des droits moraux qui protege cette these. Ni thesis. Neither the thesis nor la these ni des extraits substantiels de celle-ci substantial extracts from it may be ne doivent etre imprimes ou autrement printed or otherwise reproduced reproduits sans son autorisation. -
Abbreviation Kiel S. 2005, New and Little Known Gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar
1 Reference (Explanations see mollusca-database.eu) Abbreviation Kiel S. 2005, New and little known gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar. AF01 http://www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/ForschungImadagaskar.htm (11.03.2007, abstract) Bandel K. 2003, Cretaceous volutid Neogastropoda from the Western Desert of Egypt and their place within the noegastropoda AF02 (Mollusca). Mitt. Geol.-Paläont. Inst. Univ. Hamburg, Heft 87, p 73-98, 49 figs., Hamburg (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Kiel S. & Bandel K. 2003, New taxonomic data for the gastropod fauna of the Uzamba Formation (Santonian-Campanian, South AF03 Africa) based on newly collected material. Cretaceous research 24, p. 449-475, 10 figs., Elsevier (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Emberton K.C. 2002, Owengriffithsius , a new genus of cyclophorid land snails endemic to northern Madagascar. The Veliger 45 (3) : AF04 203-217. http://www.theveliger.org/index.html Emberton K.C. 2002, Ankoravaratra , a new genus of landsnails endemic to northern Madagascar (Cyclophoroidea: Maizaniidae?). AF05 The Veliger 45 (4) : 278-289. http://www.theveliger.org/volume45(4).html Blaison & Bourquin 1966, Révision des "Collotia sensu lato": un nouveau sous-genre "Tintanticeras". Ann. sci. univ. Besancon, 3ème AF06 série, geologie. fasc.2 :69-77 (Abstract). www.fossile.org/pages-web/bibliographie_consacree_au_ammon.htp (20.7.2005) Bensalah M., Adaci M., Mahboubi M. & Kazi-Tani O., 2005, Les sediments continentaux d'age tertiaire dans les Hautes Plaines AF07 Oranaises et le Tell Tlemcenien (Algerie occidentale). -
Bivalvia: Arcacea) from Thermal Beach, Thoothukudi, South East Coast of India
International Journal of Science and Research (IJSR) ISSN (Online): 2319-7064 Index Copernicus Value (2013): 6.14 | Impact Factor (2013): 4.438 New Distribution Record and Taxonomy of Two Cucullaeidae Species (Bivalvia: Arcacea) from Thermal Beach, Thoothukudi, South East Coast of India Souji. S1, Tresa Radhakrishnan2 Department of Aquatic Biology and Fisheries, University of Kerala, Thiruvananthapuram-695581, Kariyavattom, Kerala, India. Abstract: Arcidae are predominantly marine bivalves. Cucullaeidae are a small family of Arcidae with four living species (Huber, 2010). Two species of Cucullaeidae; Cucullaea labiata (Lightfoot, 1786) and Cucullaea petita (Iredale, 1939) were collected from Thermal beach, Thoothukudi, Tamil Nadu. The detailed systamatics, taxonomy and marked difference between these species are dealt with in this paper. The occurrence of two Cucullaea species such as Cucullaea concamerata (Martini) and Cucullaea labiata (Lightfoot) from Tamil Nadu coast was reported by Dey and Ramkrishna (2007). However, the exact distribution record and taxonomical description of these species are not available from India. Like other clams there are also commercially valuable species used as food in many countries. In this paper these two species are newly reported from Gulf of Mannar region of Tamil Nadu. These species are believed to be nearly extinct. The study area from where these species were collected was polluted with the effluents from thermal plants and saltpans. These species are highly disturbed due to climatic change and therefore strategies will be needed to conserve these species. The presences of these species indicate the rich marine bivalve diversity in the Gulf of Mannar region. The near extinction of these species should be viewed seriously and urgent steps should be initiated in order to conserve these species from further disappearance from the face of the earth for good.