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The Siak River in Central Sumatra, Indonesia
Tropical blackwater biogeochemistry: The Siak River in Central Sumatra, Indonesia Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) vorgelegt von Antje Baum Bremen 2008 Advisory Committee: 1. Reviewer: Dr. Tim Rixen Center for Tropical Marine Ecology (ZMT), Bremen, Germany 2. Reviewer: Prof. Dr. Wolfgang Balzer University of Bremen 1. Examiner: Prof. Dr. Venugopalan Ittekkot Center for Tropical Marine Ecology (ZMT), Bremen, Germany 2. Examiner: Dr. Daniela Unger Center for Tropical Marine Ecology (ZMT), Bremen, Germany I Contents Summary .................................................................................................................... III Zusammenfassung...................................................................................................VII 1. Introduction........................................................................................................ 11 2. Published and submitted papers..................................................................... 15 2.1. Sources of dissolved inorganic nutrients in the peat-draining river Siak, Central Sumatra, Indonesia ................................................................................... 15 2.2. The Siak, a tropical black water river in central Sumatra on the verge of anoxia ..................................................................................................................... 31 2.3. Relevance of peat draining rivers in central Sumatra for riverine input of dissolved organic carbon into the -
Ecology, Biology and Taxonomy. Mudskippers
Chapter of the edited collection: Mangroves: Ecology, Biology and Taxonomy. Mudskippers: human use, ecotoxicology and biomonitoring of mangrove and other soft bottom intertidal ecosystems. Gianluca Polgar 1 and Richard Lim 2 1Institute of Biological Sciences, Institute of Ocean and Earth Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia. Tel. +603-7967-4609 / 4182; e-mail: [email protected] / [email protected]. Web site: www.themudskipper.org 2Centre for Environmental Sustainability, School of the Environment, Faculty of Science, University of Technology Sydney, Broadway, New South Wales 2007, Australia. e-mail: [email protected] Abstract (269) Mudskippers (Gobiidae: Oxudercinae) are air-breathing gobies, which are widely distributed throughout the West African coast and the Indo-Pacific region. They are closely linked to mangrove and adjacent soft bottom peri-tidal ecosystems. Some species are amongst the best adapted fishes to an amphibious lifestyle. All mudskippers are benthic burrowers in anoxic sediments, and since tidal mudflats are efficient sediment traps, and sinks for nutrients and other chemical compounds, they are constantly in contact with several types of pollutants produced by industrial, agricultural and domestic activities. Due to their natural abundance, considerable resistance to highly polluted conditions, and their benthic habits, mudskippers are frequently used in aquatic ecotoxicological studies. For the same reasons, mudskippers also frequently occur in urbanised or semi-natural coastal areas. Since several species are widely consumed throughout their whole geographical range, these same characteristics also facilitate their aquaculture in several countries, such as Bangladesh, Thailand, Philippines, China, Taiwan and Japan. Even when not directly used, mudskippers are often abundant and are important prey items for many intertidal transient species (marine visitors), and several species of shorebirds. -
The Case of Musi River Palembang Dini Agumsari1* Agus S
Advances in Social Science, Education and Humanities Research, volume 475 Proceedings of the 3rd International Conference on Dwelling Form (IDWELL 2020) Capturing Genius Loci of Riparian Culture: The Case of Musi River Palembang Dini Agumsari1* Agus S. Ekomadyo2 Mochammad Gumilang Dwi Bintana3 Vanessa Susanto4 1 Urban Design, 2,3,4 Architecture, School of Architecture, Planning & Policy Development, Bandung Institute of Technology, Ganesha 10 Bandung, Indonesia *Corresponding author. Email: [email protected] ABSTRACT Musi River plays a significant role in the history and development of Palembang. Historically, the river had been used for settlement, trading, and transport activities. This phenomenon established the riparian culture that is deeply associated with the native residents who had been attached to the Musi River. However, the essential meaning of the river as a place has begun to fade because of the rapid growth of land transportation. People have shifted their water-based activities to land. This study is intentioned to capture the meaning of Musi riparian culture, which covers 16 Ilir Market area, the oldest trade center in Palembang with significant historic characteristics. By architectural phenomenology approach, this study is aimed to capture the genius loci in the area. Using qualitative research methods through the “genius loci” framework will be traced to the existence of the Musi riparian area. The results show that interactions between humans and rivers generate the spirit of this place, such as various activities, diverse ethnicity, and significant cultural history narration. Thus interaction is essential to maintain the unique characteristics of Musi riparian culture in modern times. Keywords: Genius loci, spirit of place, character, riparian culture, 16 ilir market, musi river profoundly attached to the resident's riparian culture at that time. -
Indonesia Final Format KAL 2-20-04.DOC
Toward an Integrated Perspective on Agricultural Drainage 31 4. Drainage and Integrated Water Resources Management: Two Basins This section explores the different contexts of integrated water resources management in Indonesia’s outer and the inner islands and the place of drainage in integrated water resources management. The case of Indonesia is of more than passing interest. As discussed above, earlier than other countries Indonesia adopted the principles of integrated water resources management in its main policy documents and started to reform its institutions to accommodate the possibility of river basin management. Two basins are discussed in this section, the Jratunseluna Basin in Central Java and the Musi Basin in South Sumatra in the outer islands. These contrasting basins reflect Indonesia’s great diversity, which requires different approaches in each context. Both areas are economically important—each in its own way. South Sumatra has been a fast-growing, overspill area from the Javanese heartland. The main water challenge in the Musi Basin is to improve agricultural productivity while safeguarding environmental sustainability in the lowlands. The latter challenge is more easily said than done, in face of considerable threats from the uncontrolled development of fish pond farming and the high tempo of forestry clearing, made worse by illegal logging (box 8). Indonesia once had some semblance of order in its Box 8 Lowlands under threat conservation policy, but the overall transition, “The one-million-hectare Kerinci-Seblat National economic turmoil, and decentralization to districts Park in Sumatra is surrounded by logging concessions lacking the capacity and power to manage local that cover biodiversity-rich lowland habitats excised natural resources has resulted in some situations that from proposed park boundaries after 1982 … Large can only be described as chaotic. -
The Round Goby Genome Provides Insights Into Mechanisms That May Facilitate Biological Invasions
Adrian-Kalchhauser et al. BMC Biology (2020) 18:11 https://doi.org/10.1186/s12915-019-0731-8 RESEARCH ARTICLE Open Access The round goby genome provides insights into mechanisms that may facilitate biological invasions Irene Adrian-Kalchhauser1,2* , Anders Blomberg3†, Tomas Larsson4†, Zuzana Musilova5†, Claire R. Peart6†, Martin Pippel7†, Monica Hongroe Solbakken8†, Jaanus Suurväli9†, Jean-Claude Walser10†, Joanna Yvonne Wilson11†, Magnus Alm Rosenblad3,12†, Demian Burguera5†, Silvia Gutnik13†, Nico Michiels14†, Mats Töpel2†, Kirill Pankov11†, Siegfried Schloissnig15† and Sylke Winkler7† Abstract Background: Theinvasivebenthicroundgoby(Neogobius melanostomus) is the most successful temperate invasive fish and has spread in aquatic ecosystems on both sides of the Atlantic. Invasive species constitute powerful in situ experimental systems to study fast adaptation and directional selection on short ecological timescales and present promising case studies to understand factors involved the impressive ability of some species to colonize novel environments. We seize the unique opportunity presented by the round goby invasion to study genomic substrates potentially involved in colonization success. Results: We report a highly contiguous long-read-based genome and analyze gene families that we hypothesize to relate to the ability of these fish to deal with novel environments. The analyses provide novel insights from the large evolutionary scale to the small species-specific scale. We describe expansions in specific cytochromeP450enzymes,aremarkablydiverse innate immune system, an ancient duplication in red light vision accompanied by red skin fluorescence, evolutionary patterns of epigenetic regulators, and the presence of osmoregulatory genes that may have contributed to the round goby’s capacity to invade cold and salty waters. A recurring theme across all analyzed gene families is gene expansions. -
Southeast Sumatra in Protohistoric and Srivijaya Times: Upstream-Downstream Relations and the Settlement of the Peneplain Pierre-Yves Manguin
Southeast Sumatra in Protohistoric and Srivijaya Times: Upstream-Downstream Relations and the Settlement of the Peneplain Pierre-Yves Manguin To cite this version: Pierre-Yves Manguin. Southeast Sumatra in Protohistoric and Srivijaya Times: Upstream- Downstream Relations and the Settlement of the Peneplain. Cambridge Scholars Publishing. From distant tales : archaeology and ethnohistory in the highlands of Sumatra, pp.434-484, 2009, 978-1- 4438-0497-4. halshs-02521657 HAL Id: halshs-02521657 https://halshs.archives-ouvertes.fr/halshs-02521657 Submitted on 27 Mar 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. From Distant Tales: Archaeology and Ethnohistory in the Highlands of Sumatra Edited by Dominik Bonatz, John Miksic, J. David Neidel, Mai Lin Tjoa-Bonatz From Distant Tales: Archaeology and Ethnohistory in the Highlands of Sumatra, Edited by Dominik Bonatz, John Miksic, J. David Neidel, Mai Lin Tjoa-Bonatz This book first published 2009 Cambridge Scholars Publishing 12 Back Chapman Street, Newcastle upon Tyne, NE6 2XX, UK British Library Cataloguing in Publication Data A catalogue record for this book is available from the British Library Copyright © 2009 by Dominik Bonatz, John Miksic, J. David Neidel, Mai Lin Tjoa-Bonatz and contributors All rights for this book reserved. -
Proceedings of the International Workshop On
Methods and Tools for Waret-related Adaptation to Climate Change and Climate Proofing Proceedings of the International Workshop on: Methods and tools for water-related adaptation to climate change and climate proofing Bandung, 8-9 March, 2010 Jointly organized by: Cooperative Programme on Water and Climate, The Hague, the Netherlands Research Centre for Water Resources / Puslitbang Air, Bandung, Indonesia Delta Alliance (Research Programme Knowledge for Climate) Wageningen University and Research Centre / Alterra, the Netherlands Deltares, the Netherlands With support from: United Nations Development Programme, Jakarta KNMI (Royal Netherlands Meteorological Institute) BMKG (Indonesian Meteorological, Climate and Geophysical Institute) UNESCO-IHE For further information: Puslitbang Air : "Conny Amalia"<[email protected]> CPWC: "Ton Bresser"<[email protected]> or <[email protected]> The Hague / Bandung / Jakarta / Wageningen / Delft April 2010 1 Methods and Tools for Waret-related Adaptation to Climate Change and Climate Proofing Table of Contents Table of contents .................................................................................... 2 Foreword ................................................................................................ 3 Summary ................................................................................................ 5 Introduction ............................................................................................ 7 Objectives ............................................................................................. -
1 APPENDIX 4 BANGLADESH General Information* Main Rivers
APPENDIX 4 BANGLADESH General Information* Surface area: 143,998 km2 Population (1995): 118,000,000 GDP (1996/1997): US$ 14,000 million Agricultural GDP (1996/1997): US$ 4,508 million Capture Fisheries as % of GDP1: 1.88% Aquaculture as % of GDP1: 2.69% Indicative exchange rate (1999) US$ 1 = Tk 48.5 * FAO World Fisheries Statistics – Country profile, 1999 1 Asia-Pacific Fishery Commission (2005) Main Rivers** Total area Rivers and estuaries 4,047,316 ha Total Length of 700 Rivers 22,155 km The Padma-Ganges and its distribution System Annual catch: 6,489 tonnes (1996-97)3(capture) i) Ganges, Padma 305 km Surface area: 69,481 ha2 Annual catch: 1,641 tonnes2 (1991-92) 50.6 kg/ha2 (1991-92) 0.34% contribution to production2 (1991-92) ii) Mathabhanga 128 km iii) Ichhamati 285 km iv) Bhairab 559 km v) Kumar 443 km vi) Kobadak 280 km vii) Chitra 188 km viii) Nabaganga 210 km ix) Garai, Madhumati 314 km x) Arial Khan 266 km The Meghna and Surma System Surface area: 73,999 ha2 Annual catch 84,737 tonnes (1989-90) 54,244 tonnes2 (1991-92) 1,369.60 kg/ ha2 (1991-92) 11.3% contribution to production2 (1991-92) i) Surma 350 km ii) Kushiyara 110 km 1 Jamuna-Brahmaputra System Surface area: 73,666 ha2 Annual catch: 2,280 tonnes (1989-90) i) Brahmaputra 350 km Annual catch: 505 tonnes (1989-90) 391 tonnes2 (1991-92) 0.081% contribution to production2 (1991-92) ii) Jamuna 531 km Annual catch: 1,775 tonnes (1989-90) 2,253 tonnes2 (1991-92) 30.58 kg/ ha2 (1991-92) 0.46% contribution to production2 (1991-92) Other Rivers in West region i) Nagar 238 km ii) -
DNA Barcoding Indonesian Freshwater Fishes: Challenges and Prospects
DNA Barcodes 2015; 3: 144–169 Review Open Access Nicolas Hubert*, Kadarusman, Arif Wibowo, Frédéric Busson, Domenico Caruso, Sri Sulandari, Nuna Nafiqoh, Laurent Pouyaud, Lukas Rüber, Jean-Christophe Avarre, Fabian Herder, Robert Hanner, Philippe Keith, Renny K. Hadiaty DNA Barcoding Indonesian freshwater fishes: challenges and prospects DOI 10.1515/dna-2015-0018 the last decades is posing serious threats to Indonesian Received December 12, 2014; accepted September 29, 2015 biodiversity. Indonesia, however, is one of the major sources of export for the international ornamental trade Abstract: With 1172 native species, the Indonesian and home of several species of high value in aquaculture. ichthyofauna is among the world’s most speciose. Despite The development of new tools for species identification that the inventory of the Indonesian ichthyofauna started is urgently needed to improve the sustainability of the during the eighteen century, the numerous species exploitation of the Indonesian ichthyofauna. With the descriptions during the last decades highlight that the aim to build comprehensive DNA barcode libraries, the taxonomic knowledge is still fragmentary. Meanwhile, co-authors have started a collective effort to DNA barcode the fast increase of anthropogenic perturbations during all Indonesian freshwater fishes. The aims of this review are: (1) to produce an overview of the ichthyological *Corresponding author: Nicolas Hubert, Institut de Recherche pour le researches conducted so far in Indonesia, (2) to present Développement (IRD), UMR226 ISE-M, Bât. 22 - CC065, Place Eugène an updated checklist of the freshwater fishes reported Bataillon, 34095 Montpellier cedex 5, France, E-mail: nicolas.hubert@ to date from Indonesia’s inland waters, (3) to highlight ird.fr the challenges associated with its conservation and Domenico Caruso, Laurent Pouyaud, Jean-Christophe Avarre, Institut de Recherche pour le Développement (IRD), UMR226 ISE-M, management, (4) to present the benefits of developing Bât. -
FAMILY Oxudercidae Günther 1861 - Mudskippers [=Periophthalminae, Apocrypteini, Boleophthalmi] Notes: Oxudercidae Günther, 1861C:165 [Ref
FAMILY Oxudercidae Günther 1861 - mudskippers [=Periophthalminae, Apocrypteini, Boleophthalmi] Notes: Oxudercidae Günther, 1861c:165 [ref. 1964] (family) Oxuderces Periophthalminae Gill, 1863k:271 [ref. 1692] (subfamily) Periophthalmus Apocrypteini Bleeker, 1874b:291, 299, 327 [ref. 437] (tribe) Apocryptes [also as subtribe Apocryptei] Boleophthalmi Bleeker, 1874b:300, 328 [ref. 437] (subtribe) Boleophthalmus GENUS Apocryptes Valenciennes, in Cuvier & Valenciennes, 1837 - mudskippers [=Apocryptes Valenciennes [A.], in Cuvier & Valenciennes, 1837:143] Notes: [ref. 1006]. Masc. Gobius bato Hamilton, 1822. Type by subsequent designation. Type designated by Bleeker 1874:327 [ref. 437]. •Valid as Apocryptes Valenciennes, 1837 -- (Birdsong et al. 1988:195 [ref. 7303], Murdy 1989:5 [ref. 13628], Ataur Rahman 1989:292 [ref. 24860], Larson & Murdy 2001:3592 [ref. 26293], Ataur Rahman 2003:318 [ref. 31338], Murdy 2011:104 [ref. 31728], Kottelat 2013:399 [ref. 32989]). Current status: Valid as Apocryptes Valenciennes, 1837. Oxudercidae. Species Apocryptes bato (Hamilton, 1822) - bato mudskipper (author) [=Gobius bato Hamilton [F.], 1822:40, Pl. 37 (fig. 10), Apocryptes batoides Day [F.], 1876:301, Pl. 66 (fig. 3), Scartelaos chrysophthalmus Swainson [W.], 1839:280] Notes: [An account of the fishes found in the river Ganges; ref. 2031] Ganges River estuaries, India. Current status: Valid as Apocryptes bato (Hamilton, 1822). Oxudercidae. Distribution: Indian Ocean. Habitat: freshwater, brackish, marine. (batoides) [The fishes of India Part 2; ref. 1081] Moulmein, Myanmar. Current status: Synonym of Apocryptes bato (Hamilton, 1822). Oxudercidae. Distribution: Indian Ocean. Habitat: freshwater, brackish, marine. (chrysophthalmus) [The natural history and classification v. 2; ref. 4303] Current status: Synonym of Apocryptes bato (Hamilton, 1822). Oxudercidae. Habitat: freshwater, brackish, marine. GENUS Apocryptodon Bleeker, 1874 - gobies, mudskippers [=Apocryptodon Bleeker [P.], 1874:327] Notes: [ref. -
Some Aspects of the Reproductive Biology of Labiobarbus Ocellatus in Tulang Bawang River, Lampung, Indonesia 1Indra G
Some aspects of the reproductive biology of Labiobarbus ocellatus in Tulang Bawang River, Lampung, Indonesia 1Indra G. Yudha, 2M. Fadjar Rahardjo, 3Daniel Djokosetiyanto, 2Djamar T. F. Lumban Batu 1 Department of Aquaculture, Faculty of Agriculture, Lampung University, Bandar, Lampung, Indonesia; 2 Department of Aquatic Resources Management, Faculty of Fisheries and Marine Science, Bogor Agricultural University, Bogor, Indonesia; 3 Department of Aquaculture, Faculty of Fisheries and Marine Science, Bogor Agricultural University, Bogor, Indonesia. Corresponding author: I. G. Yudha, [email protected] Abstract. This study was conducted in April 2013 to March 2014 at Tulang Bawang River and Bawang Latak Swamp, Lampung, Indonesia. The aims of this study were to asses some reproductive aspects of L. ocellatus. The specimens were consisted of 690 males and 651 females. The results showed that sex ratio of L. ocellatus was 1:1 during the spawning period in October-January. This species was total spawner and they spawned annually in rainy season. The peak of breeding season was occured in November to December. The total length at first maturity of L. ocellatus are 157±1 mm (male) and 160 ±1 mm (female). The fecundity varied between 2.142-24.294 and had corellation with total length in equation as log F = 3,653 log L - 4,546 (Tulang Bawang River) and log F = 3,982 log L - 5,287 (Bawang Latak Swamp). Key Words: L. ocellatus, reproduction, GSI, fecundity, spawning period. Introduction. Labiobarbus ocellatus (Heckel, 1843) is a benthopelagic tropical freshwaters fish belonging to Cyprinidae family (Kottelat et al 1993; Roberts 1993; Froese & Pauly 2014), native to Peninsular Malaysia and the Greater Sunda Islands of Sumatra and Borneo (Weber & de Beaufort 1916; Kottelat et al 1993), also known as Bornean eye-spot silver shark in ornamental fish trading. -
INDONESIA TROPICAL FOREST and BIODIVERSITY ANALYSIS (FAA 118 &119) Report for Country Development Cooperation Strategy (CDCS): 2020-2025
INDONESIA TROPICAL FOREST AND BIODIVERSITY ANALYSIS (FAA 118 &119) Report for Country Development Cooperation Strategy (CDCS): 2020-2025 October 2019 TEAM COMPOSITION AND ACKNOWLEDGEMENTS: The team was led by the Forestry and Climate Change Specialist from the USAID Asia Bureau’s Office of Technical Services (Asia/TS) and composed of seven technical and program specialists from USAID/ Indonesia’s Environment Office. We gratefully acknowledge the valuable contributions of Andrea Pavlick, Putu Kurniawan, Jalu Cahyanto, Anders Mantius, Dondy Sentya, Thomas Crehan, Sigit Sulistyo, Damianus Hendri Arkhyanta, Trigeany Linggoatmodjo, Endah Shofiani, and Retno Setianingsih, all of whom provided technical input related to their various sectoral programs as they intersect with conservation. We also appreciate the leadership guidance of Mission Director Erin McKee, Deputy Mission Director Ryan Washburn, Senior Management Adviser Jon Lindborg, Environment Office Director Matthew Burton, and Environment Office Deputy Director Jason Seuc, as well as the generous sharing of insights and expertise provided by the many stakeholders from civil society, government, academe, and implementing partners with whom we met. A very special thank you goes to Hundarti Ang, Lissa Inkiriwang, and Eva Napitupulu for their superb, efficient and ever-timely logistical, administrative, and budgetary support. FRONT COVER PHOTO CREDITS: Top left: Bornean Orangutan (Pongo pygmaeus); courtesy of USAID LESTARI (2018) Top right: Coral reef survey; courtesy of USAID SEA (2018) Lower: Ministry of Environment and Forestry (2018) DISCLAIMER: This report is made possible by the support of the American people through the United States Agency for International Development (USAID). The authors’ views expressed in this report do not necessarily reflect the official positions of USAID or the United States Government.