Microtubule-Dependent Trafficking of Alphaherpesviruses in the Nervous
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Where Do We Stand After Decades of Studying Human Cytomegalovirus?
microorganisms Review Where do we Stand after Decades of Studying Human Cytomegalovirus? 1, 2, 1 1 Francesca Gugliesi y, Alessandra Coscia y, Gloria Griffante , Ganna Galitska , Selina Pasquero 1, Camilla Albano 1 and Matteo Biolatti 1,* 1 Laboratory of Pathogenesis of Viral Infections, Department of Public Health and Pediatric Sciences, University of Turin, 10126 Turin, Italy; [email protected] (F.G.); gloria.griff[email protected] (G.G.); [email protected] (G.G.); [email protected] (S.P.); [email protected] (C.A.) 2 Complex Structure Neonatology Unit, Department of Public Health and Pediatric Sciences, University of Turin, 10126 Turin, Italy; [email protected] * Correspondence: [email protected] These authors contributed equally to this work. y Received: 19 March 2020; Accepted: 5 May 2020; Published: 8 May 2020 Abstract: Human cytomegalovirus (HCMV), a linear double-stranded DNA betaherpesvirus belonging to the family of Herpesviridae, is characterized by widespread seroprevalence, ranging between 56% and 94%, strictly dependent on the socioeconomic background of the country being considered. Typically, HCMV causes asymptomatic infection in the immunocompetent population, while in immunocompromised individuals or when transmitted vertically from the mother to the fetus it leads to systemic disease with severe complications and high mortality rate. Following primary infection, HCMV establishes a state of latency primarily in myeloid cells, from which it can be reactivated by various inflammatory stimuli. Several studies have shown that HCMV, despite being a DNA virus, is highly prone to genetic variability that strongly influences its replication and dissemination rates as well as cellular tropism. In this scenario, the few currently available drugs for the treatment of HCMV infections are characterized by high toxicity, poor oral bioavailability, and emerging resistance. -
Topics in Viral Immunology Bruce Campell Supervisory Patent Examiner Art Unit 1648 IS THIS METHOD OBVIOUS?
Topics in Viral Immunology Bruce Campell Supervisory Patent Examiner Art Unit 1648 IS THIS METHOD OBVIOUS? Claim: A method of vaccinating against CPV-1 by… Prior art: A method of vaccinating against CPV-2 by [same method as claimed]. 2 HOW ARE VIRUSES CLASSIFIED? Source: Seventh Report of the International Committee on Taxonomy of Viruses (2000) Edited By M.H.V. van Regenmortel, C.M. Fauquet, D.H.L. Bishop, E.B. Carstens, M.K. Estes, S.M. Lemon, J. Maniloff, M.A. Mayo, D. J. McGeoch, C.R. Pringle, R.B. Wickner Virology Division International Union of Microbiological Sciences 3 TAXONOMY - HOW ARE VIRUSES CLASSIFIED? Example: Potyvirus family (Potyviridae) Example: Herpesvirus family (Herpesviridae) 4 Potyviruses Plant viruses Filamentous particles, 650-900 nm + sense, linear ssRNA genome Genome expressed as polyprotein 5 Potyvirus Taxonomy - Traditional Host range Transmission (fungi, aphids, mites, etc.) Symptoms Particle morphology Serology (antibody cross reactivity) 6 Potyviridae Genera Bymovirus – bipartite genome, fungi Rymovirus – monopartite genome, mites Tritimovirus – monopartite genome, mites, wheat Potyvirus – monopartite genome, aphids Ipomovirus – monopartite genome, whiteflies Macluravirus – monopartite genome, aphids, bulbs 7 Potyvirus Taxonomy - Molecular Polyprotein cleavage sites % similarity of coat protein sequences Genomic sequences – many complete genomic sequences, >200 coat protein sequences now available for comparison 8 Coat Protein Sequence Comparison (RNA) 9 Potyviridae Species Bymovirus – 6 species Rymovirus – 4-5 species Tritimovirus – 2 species Potyvirus – 85 – 173 species Ipomovirus – 1-2 species Macluravirus – 2 species 10 Higher Order Virus Taxonomy Nature of genome: RNA or DNA; ds or ss (+/-); linear, circular (supercoiled?) or segmented (number of segments?) Genome size – 11-383 kb Presence of envelope Morphology: spherical, filamentous, isometric, rod, bacilliform, etc. -
Phylogenetic and Recombination Analysis of the Herpesvirus Genus Varicellovirus Aaron W
Kolb et al. BMC Genomics (2017) 18:887 DOI 10.1186/s12864-017-4283-4 RESEARCH ARTICLE Open Access Phylogenetic and recombination analysis of the herpesvirus genus varicellovirus Aaron W. Kolb1, Andrew C. Lewin2, Ralph Moeller Trane1, Gillian J. McLellan1,2,3 and Curtis R. Brandt1,3,4* Abstract Background: The varicelloviruses comprise a genus within the alphaherpesvirus subfamily, and infect both humans and other mammals. Recently, next-generation sequencing has been used to generate genomic sequences of several members of the Varicellovirus genus. Here, currently available varicellovirus genomic sequences were used for phylogenetic, recombination, and genetic distance analysis. Results: A phylogenetic network including genomic sequences of individual species, was generated and suggested a potential restriction between the ungulate and non-ungulate viruses. Intraspecies genetic distances were higher in the ungulate viruses (pseudorabies virus (SuHV-1) 1.65%, bovine herpes virus type 1 (BHV-1) 0.81%, equine herpes virus type 1 (EHV-1) 0.79%, equine herpes virus type 4 (EHV-4) 0.16%) than non-ungulate viruses (feline herpes virus type 1 (FHV-1) 0. 0089%, canine herpes virus type 1 (CHV-1) 0.005%, varicella-zoster virus (VZV) 0.136%). The G + C content of the ungulate viruses was also higher (SuHV-1 73.6%, BHV-1 72.6%, EHV-1 56.6%, EHV-4 50.5%) compared to the non-ungulate viruses (FHV-1 45.8%, CHV-1 31.6%, VZV 45.8%), which suggests a possible link between G + C content and intraspecies genetic diversity. Varicellovirus clade nomenclature is variable across different species, and we propose a standardization based on genomic genetic distance. -
Is the ZIKV Congenital Syndrome and Microcephaly Due to Syndemism with Latent Virus Coinfection?
viruses Review Is the ZIKV Congenital Syndrome and Microcephaly Due to Syndemism with Latent Virus Coinfection? Solène Grayo Institut Pasteur de Guinée, BP 4416 Conakry, Guinea; [email protected] or [email protected] Abstract: The emergence of the Zika virus (ZIKV) mirrors its evolutionary nature and, thus, its ability to grow in diversity or complexity (i.e., related to genome, host response, environment changes, tropism, and pathogenicity), leading to it recently joining the circle of closed congenital pathogens. The causal relation of ZIKV to microcephaly is still a much-debated issue. The identification of outbreak foci being in certain endemic urban areas characterized by a high-density population emphasizes that mixed infections might spearhead the recent appearance of a wide range of diseases that were initially attributed to ZIKV. Globally, such coinfections may have both positive and negative effects on viral replication, tropism, host response, and the viral genome. In other words, the possibility of coinfection may necessitate revisiting what is considered to be known regarding the pathogenesis and epidemiology of ZIKV diseases. ZIKV viral coinfections are already being reported with other arboviruses (e.g., chikungunya virus (CHIKV) and dengue virus (DENV)) as well as congenital pathogens (e.g., human immunodeficiency virus (HIV) and cytomegalovirus (HCMV)). However, descriptions of human latent viruses and their impacts on ZIKV disease outcomes in hosts are currently lacking. This review proposes to select some interesting human latent viruses (i.e., herpes simplex virus 2 (HSV-2), Epstein–Barr virus (EBV), human herpesvirus 6 (HHV-6), human parvovirus B19 (B19V), and human papillomavirus (HPV)), whose virological features and Citation: Grayo, S. -
Persistent Infection with Human Herpesvirus-6 in Patients with an Inherited Form of the Virus
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School January 2013 Persistent Infection with Human Herpesvirus-6 in Patients with an Inherited Form of the Virus: A Newly Described Disease Shara Pantry University of South Florida, [email protected] Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the Virology Commons Scholar Commons Citation Pantry, Shara, "Persistent Infection with Human Herpesvirus-6 in Patients with an Inherited Form of the Virus: A Newly Described Disease" (2013). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/4928 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Persistent Human Herpesvirus-6 Infection in Patients with an Inherited Form of the Virus: a Newly Described Disease by Shara N. Pantry A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Molecular Medicine College of Medicine University of South Florida Major Professor: Peter G. Medveczky, M.D. George Blanck, Ph.D. Gloria Ferreira, Ph.D. Ed Seto, Ph.D. Date of Approval November 5, 2013 Keywords: HHV-6, Chronic Fatigue Syndrome, Inherited Herpesvirus Syndrome, Virus Integration, Telomere Copyright © 2013, Shara N. Pantry DEDICATION I dedicate this dissertation to my grandparents, Ladric and Retinella Lewis, my parents, Beverley and Everard Pantry, and to my brothers, Marlondale and Lamonte Pantry. I would also like to dedicate this dissertation, to my niece and nephew, Chaniah and Marlondale Pantry. -
Aujeszky's Disease Control in Pigs? Cattle Exposed to Asymptomatically Infected Pigs
Aujeszky’s Importance Aujeszky’s disease (pseudorabies) is a highly contagious, economically significant Disease disease of pigs. This viral infection tends to cause central nervous system (CNS) signs in young animals, respiratory illness in older pigs, and reproductive losses in sows. Pseudorabies, Mad Itch Mortality rates in very young piglets can be high, although older animals typically recover. Recovered swine can carry the virus latently, and may resume shedding it at a later time. Other species can be infected when they contact infected pigs or eat raw Last Updated: January 2017 porcine tissues, resulting in neurological signs that are usually fatal within a few days. Serious outbreaks were seen in cattle exposed to infected swine in the past, and thousands of farmed mink and foxes in China recently died after being fed contaminated pig liver. Why animals other than pigs do not typically survive this infection is not clear. Aujeszky’s disease can result in trade restrictions, as well as economic losses, in countries where it is endemic. It remains a significant problem among domesticated pigs in some parts of the world. Variants that recently caused outbreaks among vaccinated pigs in China may be a particular concern. Eradication programs have eliminated this disease from domesticated swine in many nations, including the U.S.. The disease has never been reported in Canada. However, viruses are often still maintained in feral pigs and wild boar, and could be reintroduced to domesticated pigs from this source. Viruses from wild suids have also sporadically caused Aujeszky’s disease in other animals, particularly hunting dogs. -
(EHV-1 and EHV-9): Genetic Diversity, Latency and Co-Infections
viruses Article Zebra Alphaherpesviruses (EHV-1 and EHV-9): Genetic Diversity, Latency and Co-Infections Azza Abdelgawad 1, Armando Damiani 2, Simon Y. W. Ho 3, Günter Strauss 4, Claudia A. Szentiks 1, Marion L. East 1, Nikolaus Osterrieder 2 and Alex D. Greenwood 1,5,* 1 Leibniz-Institute for Zoo and Wildlife Research, Alfred-Kowalke-Strasse 17, Berlin 10315, Germany; [email protected] (A.A.); [email protected] (C.A.S.); [email protected] (M.L.E.) 2 Institut für Virologie, Freie Universität Berlin, Robert-von-Ostertag-Str. 7-13, Berlin 14163, Germany; [email protected] (A.D.); [email protected] (N.O.) 3 School of Life and Environmental Sciences, University of Sydney, Sydney, NSW 2006, Australia; [email protected] 4 Tierpark Berlin-Friedrichsfelde, Am Tierpark 125, Berlin 10307, Germany; [email protected] 5 Department of Veterinary Medicine, Freie Universität Berlin, Oertzenweg 19, Berlin 14163, Germany * Correspondence: [email protected]; Tel.: +49-30-516-8255 Academic Editor: Joanna Parish Received: 21 July 2016; Accepted: 14 September 2016; Published: 20 September 2016 Abstract: Alphaherpesviruses are highly prevalent in equine populations and co-infections with more than one of these viruses’ strains frequently diagnosed. Lytic replication and latency with subsequent reactivation, along with new episodes of disease, can be influenced by genetic diversity generated by spontaneous mutation and recombination. Latency enhances virus survival by providing an epidemiological strategy for long-term maintenance of divergent strains in animal populations. The alphaherpesviruses equine herpesvirus 1 (EHV-1) and 9 (EHV-9) have recently been shown to cross species barriers, including a recombinant EHV-1 observed in fatal infections of a polar bear and Asian rhinoceros. -
Introduction to Viroids and Prions
Harriet Wilson, Lecture Notes Bio. Sci. 4 - Microbiology Sierra College Introduction to Viroids and Prions Viroids – Viroids are plant pathogens made up of short, circular, single-stranded RNA molecules (usually around 246-375 bases in length) that are not surrounded by a protein coat. They have internal base-pairs that cause the formation of folded, three-dimensional, rod-like shapes. Viroids apparently do not code for any polypeptides (proteins), but do cause a variety of disease symptoms in plants. The mechanism for viroid replication is not thoroughly understood, but is apparently dependent on plant enzymes. Some evidence suggests they are related to introns, and that they may also infect animals. Disease processes may involve RNA-interference or activities similar to those involving mi-RNA. Prions – Prions are proteinaceous infectious particles, associated with a number of disease conditions such as Scrapie in sheep, Bovine Spongiform Encephalopathy (BSE) or Mad Cow Disease in cattle, Chronic Wasting Disease (CWD) in wild ungulates such as muledeer and elk, and diseases in humans including Creutzfeld-Jacob disease (CJD), Gerstmann-Straussler-Scheinker syndrome (GSS), Alpers syndrome (in infants), Fatal Familial Insomnia (FFI) and Kuru. These diseases are characterized by loss of motor control, dementia, paralysis, wasting and eventually death. Prions can be transmitted through ingestion, tissue transplantation, and through the use of comtaminated surgical instruments, but can also be transmitted from one generation to the next genetically. This is because prion proteins are encoded by genes normally existing within the brain cells of various animals. Disease is caused by the conversion of normal cell proteins (glycoproteins) into prion proteins. -
Herpesviral Latency—Common Themes
pathogens Review Herpesviral Latency—Common Themes Magdalena Weidner-Glunde * , Ewa Kruminis-Kaszkiel and Mamata Savanagouder Department of Reproductive Immunology and Pathology, Institute of Animal Reproduction and Food Research of Polish Academy of Sciences, Tuwima Str. 10, 10-748 Olsztyn, Poland; [email protected] (E.K.-K.); [email protected] (M.S.) * Correspondence: [email protected] Received: 22 January 2020; Accepted: 14 February 2020; Published: 15 February 2020 Abstract: Latency establishment is the hallmark feature of herpesviruses, a group of viruses, of which nine are known to infect humans. They have co-evolved alongside their hosts, and mastered manipulation of cellular pathways and tweaking various processes to their advantage. As a result, they are very well adapted to persistence. The members of the three subfamilies belonging to the family Herpesviridae differ with regard to cell tropism, target cells for the latent reservoir, and characteristics of the infection. The mechanisms governing the latent state also seem quite different. Our knowledge about latency is most complete for the gammaherpesviruses due to previously missing adequate latency models for the alpha and beta-herpesviruses. Nevertheless, with advances in cell biology and the availability of appropriate cell-culture and animal models, the common features of the latency in the different subfamilies began to emerge. Three criteria have been set forth to define latency and differentiate it from persistent or abortive infection: 1) persistence of the viral genome, 2) limited viral gene expression with no viral particle production, and 3) the ability to reactivate to a lytic cycle. This review discusses these criteria for each of the subfamilies and highlights the common strategies adopted by herpesviruses to establish latency. -
Herpes Simplex Virus 1 (HSV-1) for Cancer Treatment Y Shen and J Nemunaitis Mary Crowley Medical Research Center, Dallas, TX, USA
Cancer Gene Therapy (2006) 13, 975–992 r 2006 Nature Publishing Group All rights reserved 0929-1903/06 $30.00 www.nature.com/cgt REVIEW Herpes simplex virus 1 (HSV-1) for cancer treatment Y Shen and J Nemunaitis Mary Crowley Medical Research Center, Dallas, TX, USA Cancer remains a serious threat to human health, causing over 500 000 deaths each year in US alone, exceeded only by heart diseases. Many new technologies are being developed to fight cancer, among which are gene therapies and oncolytic virotherapies. Herpes simplex virus type 1 (HSV-1) is a neurotropic DNA virus with many favorable properties both as a delivery vector for cancer therapeutic genes and as a backbone for oncolytic viruses. Herpes simplex virus type 1 is highly infectious, so HSV-1 vectors are efficient vehicles for the delivery of exogenous genetic materials to cells. The inherent cytotoxicity of this virus, if harnessed and made to be selective by genetic manipulations, makes this virus a good candidate for developing viral oncolytic approach. Furthermore, its large genome size, ability to infect cells with a high degree of efficiency, and the presence of an inherent replication controlling mechanism, the thymidine kinase gene, add to its potential capabilities. This review briefly summarizes the biology of HSV-1, examines various strategies that have been used to genetically modify the virus, and discusses preclinical as well as clinical results of the HSV-1-derived vectors in cancer treatment. Cancer Gene Therapy (2006) 13, 975–992. doi:10.1038/sj.cgt.7700946; published online 7 April 2006 Keywords: herpes simplex virus; HSV-1; cancer; oncolytic virus; clinical; gene therapy Introduction anti-HSV antibodies during the replication process. -
Complete Sections As Applicable
This form should be used for all taxonomic proposals. Please complete all those modules that are applicable (and then delete the unwanted sections). For guidance, see the notes written in blue and the separate document “Help with completing a taxonomic proposal” Please try to keep related proposals within a single document; you can copy the modules to create more than one genus within a new family, for example. MODULE 1: TITLE, AUTHORS, etc (to be completed by ICTV Code assigned: 2010.016a-eV officers) Short title: Create genus Scutavirus (type species: the currently unassigned species Chelonid herpesvirus 5) in subfamily Alphaherpesvirinae, family Herpesviridae (e.g. 6 new species in the genus Zetavirus) Modules attached 1 2 3 4 5 (modules 1 and 9 are required) 6 7 8 9 Author(s) with e-mail address(es) of the proposer: Andrew Davison ([email protected]) & Duncan McGeoch List the ICTV study group(s) that have seen this proposal: A list of study groups and contacts is provided at http://www.ictvonline.org/subcommittees.asp . If in doubt, contact the appropriate subcommittee Herpesvirales Study Group chair (fungal, invertebrate, plant, prokaryote or vertebrate viruses) ICTV-EC or Study Group comments and response of the proposer: This proposal has had a full round of discussion and has been approved without dissent by the Herpesvirales Study Group. Date first submitted to ICTV: To Study Group Chair Feb. 3, 2010 Communicated to SG Feb. 9, 2010 Final SG vote completed April 7, 2010 Date of this revision (if different to above): June 4, 2010 Module 7 added July 4, 2010 Page 1 of 6 MODULE 3: NEW GENUS creating a new genus Ideally, a genus should be placed within a higher taxon. -
® Parvovirinae ® Densovirinae
Parvovirinae humans can be infected by viruses within three other genera from the family Parvoviridae. Parvovirus B19 Bocaviruses Dependoviruses(Adeno-Associated Virus) Densovirinae Autonomous parvovirus replication Helper dependent parvovirus (AAV) replication Infection with adenovirus Infection without adenovirus Lytic replication Superinfect with adenovirus AAV DNA integrates into chromosome 19 Erythema Infectiosum (fifth disease) Arthritis Transient Aplastic Crisis in chronic hemolytic anemia Chronic anemia in immunodeficiency syndrome Hydrops fetalis Fifth disease is a mild rash illness that occurs most commonly in children An ill child may have a low-grade fever, malaise, or a "cold" a few days before the rash breaks out The child is usually not very ill, and the rash resolves in 7 to 10 days. Transmission of infection occurs via: respiratory secretions (e.g., saliva, sputum, or nasal mucus) The virus is probably spread from person to person by direct contact with those secretions blood-derived products administered parenterally vertically from mother to fetus How soon after infection with parvovirus B19 does a person become ill A susceptible person usually becomes ill 4 to 14 days after being infected with the virus, but may become ill for as long as 20 days after infection. Does everyone who is infected with parvovirus B19 become ill? No. During outbreaks of fifth disease, about 20% of adults and children who are infected with parvovirus B19 do not develop any symptoms. Furthermore, other persons infected with the virus will have a non-specific illness that is not characteristic of fifth disease. Persons infected with the virus, however, do develop lasting immunity that protects them against infection in the future.