Profile of R. Scott Hawley
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NOTES and COMMENTS the Fbrmation of A
Heredity (1978), 41(2), 233-237 NOTESAND COMMENTS SYNAPTONEMAL COMPLEX AND CROSSING-OVER: STRUCTURAL SUPPORT OR INTERFERENCE? RICHARD EGEL* Institut für Biologie Ill der Universitat, Schdrizlestr. 1, D-7800 Freiburg, Federal Republic of Germany Received16.iii.78 SUMMARY Positive cross-over interference is attributed to the prevention of crossing- over by the growing synaptonemal complez. This conjecture is based on a report in the literature that the selection of prospective cross-over sites may actually precede a proper synapsis of homologous chromosomes during meiotic prophase. A genetic test of this notion is suggested using a properly marked trisomic configuration, applicable to a variety of organisms. I. INTRODUCTION THE fbrmation of a synaptonemal complex during meiosis (in short: "synapsis ") has proved to be almost as universal among eukaryotes as meiosis itself (Moses, 1968; Westergaard and von Wettstein, 1972). Its implication in meiotic recombination, in the establishment of cross-overs or chiasmata, is the widely accepted view of cytogeneticists (Gillies, 1975), although the mode of this implication remains as enigmatic as ever. At the time when copy-choice models were entertained to explain recombination (see Pritchard, 1960), the idea that recombination is initiated before synapsis was already pondered thoroughly. Yet, the discovery that premeiotic DNA synthesis can even precede nuclear fusion, e.g. in J"Ieottiella (Rossen and Westergaard, 1966), has reduced the possibility of copy-choice replication to no more than local episodes of repair-type synthesis, which still retains the advantage of explaining high negative interference at intragenic distances (Pritchard, 1960). Comparative analyses of mutants defective in certain aspects of meiosis have shown that asynaptic mutants such as C(3) G in Drosophila (see Lindsley and SandIer, 1977) fail to undergo recombination, and that desynaptic mutants or varieties are known in several species, in which crossing-over is reduced or absent despite initially formed synaptonemal complexes. -
Sumoylation Regulates Protein Dynamics During Meiotic Chromosome Segregation in C
© 2019. Published by The Company of Biologists Ltd | Journal of Cell Science (2019) 132, jcs232330. doi:10.1242/jcs.232330 RESEARCH ARTICLE Sumoylation regulates protein dynamics during meiotic chromosome segregation in C. elegans oocytes Federico Pelisch*, Laura Bel Borja, Ellis G. Jaffray and Ronald T. Hay ABSTRACT studies of MT-dependent chromosome movement focused on Oocyte meiotic spindles in most species lack centrosomes and pulling forces generated by kinetochore MTs (kMTs) making the mechanisms that underlie faithful chromosome segregation end-on contacts with chromosomes (Cheeseman, 2014), there is in acentrosomal meiotic spindles are not well understood. In also evidence for pushing forces that are exerted on the segregating C. elegans oocytes, spindle microtubules exert a poleward force on chromosomes (Khodjakov et al., 2004; Nahaboo et al., 2015; š ́ chromosomes that is dependent on the microtubule-stabilising Laband et al., 2017; Vuku ic et al., 2017; Yu et al., 2019 preprint). protein CLS-2, the orthologue of the mammalian CLASP proteins. The nematode Caenorhabditis elegans contains holocentric The checkpoint kinase BUB-1 and CLS-2 localise in the central chromosomes (Maddox et al., 2004) and has served as an spindle and display a dynamic localisation pattern throughout extremely useful system to uncover mechanisms of meiosis and anaphase, but the signals regulating their anaphase-specific mitosis for almost 20 years (Oegema et al., 2001; Desai et al., 2003; localisation remains unknown. We have shown previously that Cheeseman et al., 2004, 2005; Monen et al., 2005). Meiosis is a SUMO regulates BUB-1 localisation during metaphase I. Here, we specialised cell division with two successive rounds of chromosome found that SUMO modification of BUB-1 is regulated by the SUMO E3 segregation that reduce the ploidy and generates haploid gametes ligase GEI-17 and the SUMO protease ULP-1. -
Elucidation of Factors Impacting Homologous Recombination
ELUCIDATION OF FACTORS IMPACTING HOMOLOGOUS RECOMBINATION IN MAMMALIAN MEIOSIS by SHEILA M. CHERRY Submitted in partial fulfillment of the requirements For the degree of Doctor of Philosophy Thesis Advisor: Dr. Terry J. Hassold Department of Genetics CASE WESTERN RESERVE UNIVERSITY January, 2007 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the dissertation of ______________________________________________________ candidate for the Ph.D. degree *. (signed)_______________________________________________ (chair of the committee) ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ (date) _______________________ *We also certify that written approval has been obtained for any proprietary material contained therein. 1 Table of Contents Table of Contents……...……………………………………………..…………………..1 List of Tables…………...……………………………………………………..………….2 List of Figures………..………………………………………………………………..…3 Abstract…………………………………………………………………………………...5 Chapter One: Introduction…………………………………………………………….7 Chapter Two: Environment and Recombination………………..….………………..40 Chapter Three: Early recombination events and crossover control…..………..……..77 Chapter Four: Understanding late recombination events……..…….………………112 Chapter Five: Summary and Future Directions…………………………………….135 Bibliography…………………………………………………………………………...148 2 List of Tables Table 2-1: Mean -
DNA Organization Along Pachytene Chromosome Axes and Its Relationship with Crossover Frequencies
International Journal of Molecular Sciences Article DNA Organization along Pachytene Chromosome Axes and Its Relationship with Crossover Frequencies Lucía del Priore and María Inés Pigozzi * INBIOMED-Instituto de Investigaciones Biomédicas, Universidad de Buenos Aires-CONICET, Facultad de Medicina, Paraguay 2155, C1121ABG Buenos Aires, Argentina; [email protected] * Correspondence: [email protected] Abstract: During meiosis, the number of crossovers vary in correlation to the length of prophase chromosome axes at the synaptonemal complex stage. It has been proposed that the regular spacing of the DNA loops, along with the close relationship of the recombination complexes and the meiotic axes are at the basis of this covariation. Here, we use a cytogenomic approach to investigate the relationship between the synaptonemal complex length and the DNA content in chicken oocytes during the pachytene stage of the first meiotic prophase. The synaptonemal complex to DNA ratios of specific chromosomes and chromosome segments were compared against the recombination rates obtained by MLH1 focus mapping. The present results show variations in the DNA packing ratios of macro- and microbivalents and also between regions within the same bivalent. Chromosome or chromosome regions with higher crossover rates form comparatively longer synaptonemal complexes than expected based on their DNA content. These observations are compatible with the formation of higher number of shorter DNA loops along meiotic axes in regions with higher recombination levels. Keywords: meiosis; crossing over; synaptonemal complex; MLH1 focus map; bird chromosomes; recombination frequencies; immunostaining; fluorescent in situ hybridization; molecular cytogenetics Citation: del Priore, L.; Pigozzi, M.I. DNA Organization along Pachytene 1. Introduction Chromosome Axes and Its The synaptonemal complex (SC) is an evolutionarily conserved structure that has Relationship with Crossover been found in most sexually reproducing organisms. -
Chapter 3 Characterization of Meiotic Chromosome Organization and the Distribution of Dsbs and Crossovers
UC Berkeley UC Berkeley Electronic Theses and Dissertations Title Quantitative characterization of meiotic chromosome organization Permalink https://escholarship.org/uc/item/5mr0c0kp Author Cheveralls, Keith Charles Publication Date 2016 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California Quantitative characterization of meiotic chromosome organization By Keith Charles Cheveralls A Dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Biophysics in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Abby F. Dernburg, Chair Professor David Drubin Professor Barbara Meyer Professor Eva Nogales Spring 2016 Abstract Quantitative characterization of meiotic chromosome organization by Keith Charles Cheveralls Doctor of Philosophy in Biophysics University of California, Berkeley Professor Abby F. Dernburg, Chair Sexual reproduction relies on a specialized program of cell division called meiosis to generate haploid gametes from diploid germ cells. In order for chromosome segregation to occur accurately, homologous chromosomes must pair, synapse, and undergo crossover recombination. These physical and biochemical interactions occur in coordination with large-scale reorganization of meiotic chromosomes. To understand the relationship between chromosome organization and the regulation of recombination, we developed an automated image analysis pipeline that combines the throughput of population-based -
1 the Formation of the Central Element of Synaptonemal Complex
Genetics: Published Articles Ahead of Print, published on October 18, 2007 as 10.1534/genetics.107.078717 The Formation of the Central Element of Synaptonemal Complex May Occur By Multiple Mechanisms: The Roles of the N- and C-Terminal Domains of the Drosophila C(3)G Protein in Mediating Synapsis and Recombination Jennifer K. Jeffress*,1, Scott L. Page*,2, Suzanne K. Royer†, Elizabeth D. Belden*, Justin Blumenstiel*, Lorinda K. Anderson†, and R. Scott Hawley*,‡ * Stowers Institute for Medical Research, Kansas City, Missouri 64110 † Department of Biology, Colorado State University, Fort Collins, Colorado 80523 ‡ Department of Physiology, University of Kansas School of Medicine, Kansas City, Kansas 66160 1 Present address: Institute of Molecular Biology, University of Oregon, Eugene, Oregon 97403 2 Present address: Comparative Genomics Centre, James Cook University, Townsville, Queensland 4811, Australia 1 Running Title: N- and C-Terminal Domains of C(3)G Keywords: Meiosis, Recombination, Synaptonemal Complex, Chromosome Corresponding Author: R. Scott Hawley Stowers Institute for Medical Research, 1000 E. 50th St., Kansas City, MO 64110. Phone: 816-926-4427 Fax: 816-926-2060 Email: [email protected] 2 ABSTRACT In Drosophila melanogaster oocytes, the C(3)G protein comprises the transverse filaments (TFs) of the synaptonemal complex (SC). Like other TF proteins, such as Zip1p in yeast and SCP1 in mammals, C(3)G is comprised of a central coiled-coil-rich domain flanked by N- and C-terminal globular domains. Here, we analyze in-frame deletions within the N- and C-terminal regions of C(3)G in Drosophila oocytes. As is the case for Zip1p, a C-terminal deletion of C(3)G fails to attach to the lateral elements of the SC. -
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The Many Facets of SC Function During C. Elegans Meiosis
Chromosoma DOI 10.1007/s00412-006-0061-9 REVIEW Mónica P. Colaiácovo The many facets of SC function during C. elegans meiosis Received: 7 December 2005 / Revised: 15 February 2006 / Accepted: 16 February 2006 # Springer-Verlag 2006 Abstract Sexually reproducing organisms rely on meiosis halving in chromosome number is the result of one round for the formation of haploid gametes. This is achieved of DNA replication followed by two rounds of cell through two consecutive rounds of cell division (meiosis I division: meiosis I (a reductional division) and meiosis II and II) after one round of DNA replication. During the (an equational division). While meiosis II proceeds meiotic divisions, chromosomes face several challenges to similarly to a mitotic division, unique events unfold during ultimately ensure proper chromosome segregation. Unique meiosis I. In particular, during prophase I, homologous events unfold during meiosis I to overcome these chromosomes have to identify each other and pair, challenges. Homologous chromosomes pair, synapse, and followed by the formation of a proteinaceous structure recombine. A remarkable feature throughout this process is known as the synaptonemal complex (SC) between the formation of an evolutionarily conserved tripartite homologs, and completion of meiotic recombination proteinaceous structure known as the synaptonemal com- leading to physical attachments between homologs. plex (SC). It is comprised of two lateral elements, These events ultimately ensure proper chromosome segre- assembled along each axis of a pair of homologous gation upon the first meiotic division. Succeeding in this chromosomes, and a central region consisting of transverse outcome is crucial given that chromosome nondisjunction filaments bridging the gap between lateral elements. -
Rapid Evolution and Positive Selection in the Synaptonemal Complex of Drosophila Lucas W
Hemmer and Blumenstiel BMC Evolutionary Biology (2016) 16:91 DOI 10.1186/s12862-016-0670-8 RESEARCH ARTICLE Open Access Holding it together: rapid evolution and positive selection in the synaptonemal complex of Drosophila Lucas W. Hemmer* and Justin P. Blumenstiel Abstract Background: The synaptonemal complex (SC) is a highly conserved meiotic structure that functions to pair homologs and facilitate meiotic recombination in most eukaryotes. Five Drosophila SC proteins have been identified and localized within the complex: C(3)G, C(2)M, CONA, ORD, and the newly identified Corolla. The SC is required for meiotic recombination in Drosophila and absence of these proteins leads to reduced crossing over and chromosomal nondisjunction. Despite the conserved nature of the SC and the key role that these five proteins have in meiosis in D. melanogaster, they display little apparent sequence conservation outside the genus. To identify factors that explain this lack of apparent conservation, we performed a molecular evolutionary analysis of these genes across the Drosophila genus. Results: For the five SC components, gene sequence similarity declines rapidly with increasing phylogenetic distance and only ORD and C(2)M are identifiable outside of the Drosophila genus. SC gene sequences have a higher dN/dS (ω) rate ratio than the genome wide average and this can in part be explained by the action of positive selection in almost every SC component. Across the genus, there is significant variation in ω for each protein. It further appears that ω estimates for the five SC components are in accordance with their physical position within the SC. -
Genomic Evidence for Independent Loss of the Canonical Synaptonemal Complex Sarah Shah1,2,3, Yibi Chen1,2,3, Debashish Bhattacharya4 & Cheong Xin Chan1,2,3 ✉
www.nature.com/scientificreports OPEN Sex in Symbiodiniaceae dinofagellates: genomic evidence for independent loss of the canonical synaptonemal complex Sarah Shah1,2,3, Yibi Chen1,2,3, Debashish Bhattacharya4 & Cheong Xin Chan1,2,3 ✉ Dinofagellates of the Symbiodiniaceae family encompass diverse symbionts that are critical to corals and other species living in coral reefs. It is well known that sexual reproduction enhances adaptive evolution in changing environments. Although genes related to meiotic functions were reported in Symbiodiniaceae, cytological evidence of meiosis and fertilisation are however yet to be observed in these taxa. Using transcriptome and genome data from 21 Symbiodiniaceae isolates, we studied genes that encode proteins associated with distinct stages of meiosis and syngamy. We report the absence of genes that encode main components of the synaptonemal complex (SC), a protein structure that mediates homologous chromosomal pairing and class I crossovers. This result suggests an independent loss of canonical SCs in the alveolates, that also includes the SC-lacking ciliates. We hypothesise that this loss was due in part to permanently condensed chromosomes and repeat-rich sequences in Symbiodiniaceae (and other dinofagellates) which favoured the SC-independent class II crossover pathway. Our results reveal novel insights into evolution of the meiotic molecular machinery in the ecologically important Symbiodiniaceae and in other eukaryotes. Sex is part of the life cycle of nearly all eukaryotes and has most likely been so since the last eukaryotic com- mon ancestor1. Even lineages that were traditionally thought to be asexual, such as the Amoebozoa, possess the molecular machinery required for sex2. Dinofagellates, a group of fagellated, mostly marine phytoplankton, are no exception. -
SUMO-Mediated Regulation of Synaptonemal Complex Formation During Meiosis
Downloaded from genesdev.cshlp.org on September 29, 2021 - Published by Cold Spring Harbor Laboratory Press PERSPECTIVE SUMO-mediated regulation of synaptonemal complex formation during meiosis Carlos Egydio de Carvalho and Mónica P. Colaiácovo1 Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA The propagation of most sexually reproducing species is 1998) and requires the activities of a DSB-inducing en- possible due to a specialized form of cell division known zyme, as well as of strand invasion/exchange proteins as meiosis, which leads to the formation of haploid ga- (Giroux et al. 1989; Rockmill et al. 1995; Keeney et al. metes that fuse upon fertilization, reconstituting the 1997; Peoples et al. 2002). After DSBs are resolved into species ploidy. A hallmark of meiosis is the ability to either reciprocal crossover or noncrossover repair events, segregate homologous chromosomes away from each the SC gradually disassembles. The homologs, however, other, thereby reducing the chromosome set by half. remain associated through chiasmata resulting from the Mechanistically, this involves pairing, synapsis, and the earlier crossover recombination events, underpinned by reciprocal exchange of genetic material (crossover re- flanking sister chromatid cohesion. combination) between homologous chromosomes dur- The functional dependency between the formation/ ing prophase I. These events ensure that homologs re- disassembly of the SC and maturation of recombination main physically connected even after they desynapse, intermediates is intuitive if one considers the impor- allowing for their proper alignment at the metaphase tance of preventing DNA exchange between nonhomolo- plate and subsequent segregation to opposite poles of the gous chromosomes and assuring the successful segrega- spindle during the first meiotic division. -
Homologous Chromosome Pairing in Drosophila Melanogaster Proceeds Through Multiple Independent Initiations Jennifer C
Homologous Chromosome Pairing in Drosophila melanogaster Proceeds through Multiple Independent Initiations Jennifer C. Fung,* Wallace F. Marshall,‡ Abby Dernburg,‡ David A. Agard,‡i and John W. Sedat‡ *Graduate Group in Biophysics and ‡Department of Biochemistry and Biophysics, University of California, San Francisco, California 94143-0554; and iThe Howard Hughes Medical Institute, San Franciso, California 94143 Abstract. The dynamics by which homologous chro- pairing kinetics of histone loci during nuclear cycle 14. mosomes pair is currently unknown. Here, we use fluo- By measuring changes of nuclear length and correlating rescence in situ hybridization in combination with these changes with progression of time during cycle 14, three-dimensional optical microscopy to show that ho- we were able to express the pairing frequency and dis- mologous pairing of the somatic chromosome arm 2L tance between homologous loci as a function of time. in Drosophila occurs by independent initiation of pair- Comparing the experimentally determined dynamics of ing at discrete loci rather than by a processive zippering pairing to simulations based on previously proposed Downloaded from of sites along the length of chromosome. By evaluating models of pairing motion, we show that the observed the pairing frequencies of 11 loci on chromosome arm pairing kinetics are most consistent with a constrained 2L over several timepoints during Drosophila embry- random walk model and not consistent with a directed onic development, we show that all 11 loci are paired motion model. Thus, we conclude that simple random very early in Drosophila development, within 13 h after contacts through diffusion could suffice to allow pairing egg deposition.