Monilinia Fructicola
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Methods and Work Profile
REVIEW OF THE KNOWN AND POTENTIAL BIODIVERSITY IMPACTS OF PHYTOPHTHORA AND THE LIKELY IMPACT ON ECOSYSTEM SERVICES JANUARY 2011 Simon Conyers Kate Somerwill Carmel Ramwell John Hughes Ruth Laybourn Naomi Jones Food and Environment Research Agency Sand Hutton, York, YO41 1LZ 2 CONTENTS Executive Summary .......................................................................................................................... 8 1. Introduction ............................................................................................................ 13 1.1 Background ........................................................................................................................ 13 1.2 Objectives .......................................................................................................................... 15 2. Review of the potential impacts on species of higher trophic groups .................... 16 2.1 Introduction ........................................................................................................................ 16 2.2 Methods ............................................................................................................................. 16 2.3 Results ............................................................................................................................... 17 2.4 Discussion .......................................................................................................................... 44 3. Review of the potential impacts on ecosystem services ....................................... -
<I>Mucorales</I>
Persoonia 30, 2013: 57–76 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158513X666259 The family structure of the Mucorales: a synoptic revision based on comprehensive multigene-genealogies K. Hoffmann1,2, J. Pawłowska3, G. Walther1,2,4, M. Wrzosek3, G.S. de Hoog4, G.L. Benny5*, P.M. Kirk6*, K. Voigt1,2* Key words Abstract The Mucorales (Mucoromycotina) are one of the most ancient groups of fungi comprising ubiquitous, mostly saprotrophic organisms. The first comprehensive molecular studies 11 yr ago revealed the traditional Mucorales classification scheme, mainly based on morphology, as highly artificial. Since then only single clades have been families investigated in detail but a robust classification of the higher levels based on DNA data has not been published phylogeny yet. Therefore we provide a classification based on a phylogenetic analysis of four molecular markers including the large and the small subunit of the ribosomal DNA, the partial actin gene and the partial gene for the translation elongation factor 1-alpha. The dataset comprises 201 isolates in 103 species and represents about one half of the currently accepted species in this order. Previous family concepts are reviewed and the family structure inferred from the multilocus phylogeny is introduced and discussed. Main differences between the current classification and preceding concepts affects the existing families Lichtheimiaceae and Cunninghamellaceae, as well as the genera Backusella and Lentamyces which recently obtained the status of families along with the Rhizopodaceae comprising Rhizopus, Sporodiniella and Syzygites. Compensatory base change analyses in the Lichtheimiaceae confirmed the lower level classification of Lichtheimia and Rhizomucor while genera such as Circinella or Syncephalastrum completely lacked compensatory base changes. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Diseases of Trees in the Great Plains
United States Department of Agriculture Diseases of Trees in the Great Plains Forest Rocky Mountain General Technical Service Research Station Report RMRS-GTR-335 November 2016 Bergdahl, Aaron D.; Hill, Alison, tech. coords. 2016. Diseases of trees in the Great Plains. Gen. Tech. Rep. RMRS-GTR-335. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 229 p. Abstract Hosts, distribution, symptoms and signs, disease cycle, and management strategies are described for 84 hardwood and 32 conifer diseases in 56 chapters. Color illustrations are provided to aid in accurate diagnosis. A glossary of technical terms and indexes to hosts and pathogens also are included. Keywords: Tree diseases, forest pathology, Great Plains, forest and tree health, windbreaks. Cover photos by: James A. Walla (top left), Laurie J. Stepanek (top right), David Leatherman (middle left), Aaron D. Bergdahl (middle right), James T. Blodgett (bottom left) and Laurie J. Stepanek (bottom right). To learn more about RMRS publications or search our online titles: www.fs.fed.us/rm/publications www.treesearch.fs.fed.us/ Background This technical report provides a guide to assist arborists, landowners, woody plant pest management specialists, foresters, and plant pathologists in the diagnosis and control of tree diseases encountered in the Great Plains. It contains 56 chapters on tree diseases prepared by 27 authors, and emphasizes disease situations as observed in the 10 states of the Great Plains: Colorado, Kansas, Montana, Nebraska, New Mexico, North Dakota, Oklahoma, South Dakota, Texas, and Wyoming. The need for an updated tree disease guide for the Great Plains has been recog- nized for some time and an account of the history of this publication is provided here. -
Thesis FINAL PRINT
Preface This study was conducted at the Department of Chemistry, Biotechnology and Food Science (IKBM), Norwegian University of Life Sciences (UMB) during November 2009 to November 2010. My supervisors were Professor Dr Arne Tronsmo and PhD student Md. Hafizur Rahman, Department of IKBM, UMB. I express my sincere appreciation and gratitude to Professor Arne Tronsmo and Dr. Linda Gordon Hjeljord for their dynamic guidance throughout the period of the study, constant encouragement, constructive criticism and valuable suggestion during preparation of the thesis. I also want to thank Md. Hafizur Rahman for his guidance during my research work. Moreover I express my sincere gratitude to Grethe Kobro and Else Maria Aasen and all other staffs and workers at IKBM, UMB for their helpful co-operation to complete the research work in the laboratory. Last but not the least; I feel the heartiest indebtedness to Sabine and my family members for their patient inspirations, sacrifices and never ending encouragement. Ås, January 2011 Latifur Rahman Shovan i Abstract This thesis has been focused on methods to control diseases caused by Botrytis cinerea. B. cinerea causes grey mould disease of strawberry and chickpea, as well as many other plants. The fungal isolates used were isolated from chickpea leaf (Gazipur, Bangladesh) or obtained from the Norwegian culture collections of Bioforsk (Ås) and IKBM (UMB). Both morphological and molecular characterization helped to identify the fungal isolates as Botrytis cinerea (B. cinerea 101 and B. cinerea-BD), Trichoderma atroviride, T. asperellum Alternaria brassicicola, and Mucor piriformis. The identity of one fungal isolate, which was obtained from the culture collection of Bioforsk under the name Microdochium majus, could not be confirmed in this study. -
Fungal Community in Olive Fruits of Cultivars with Different
Biological Control 110 (2017) 1–9 Contents lists available at ScienceDirect Biological Control journal homepage: www.elsevier.com/locate/ybcon Fungal community in olive fruits of cultivars with different susceptibilities MARK to anthracnose and selection of isolates to be used as biocontrol agents ⁎ Gilda Preto, Fátima Martins, José Alberto Pereira, Paula Baptista CIMO, School of Agriculture, Polytechnic Institute of Bragança, Campus de Santa Apolónia, 5300-253 Bragança, Portugal ARTICLE INFO ABSTRACT Keywords: Olive anthracnose is an important fruit disease in olive crop worldwide. Because of the importance of microbial Olea europaea phyllosphere to plant health, this work evaluated the effect of cultivar on endophytic and epiphytic fungal Colletotrichum acutatum communities by studying their diversity in olives of two cultivars with different susceptibilities to anthracnose. Endophytes The biocontrol potency of native isolates against Colletotrichum acutatum, the main causal agent of this disease, Epiphytes was further evaluated using the dual-culture method. Fungal community of both cultivars encompassed a Cultivar effect complex species consortium including phytopathogens and antagonists. Host genotype was important in shaping Biocontrol endophytic but not epiphytic fungal communities, although some host-specific fungal genera were found within epiphytic community. Epiphytic and endophytic fungal communities also differed in size and in composition in olives of both cultivars, probably due to differences in physical and chemical nature of the two habitats. Fungal tested were able to inhibited C. acutatum growth (inhibition coefficients up to 30.9), sporulation (from 46 to 86%) and germination (from 21 to 74%), and to caused abnormalities in pathogenic hyphae. This finding could open opportunities to select specific beneficial microbiome by selecting particular cultivar and highlighted the potential use of these fungi in the biocontrol of olive anthracnose. -
Comparative Analysis of Monilinia Fructicola and M. Laxa Isolates from Brazil: Monocyclic Components of Peach Brown Rot
CiênciaComparative Rural, Santa analysis Maria, of Monilinia v.47: 06, fructicola e20160300, and M. laxa2017 isolates from Brazil assessing http://dx.doi.org/10.1590/0103-8478cr20160300 monocyclic components of peach... 1 ISSNe 1678-4596 CROP PROTECTION Comparative analysis of Monilinia fructicola and M. laxa isolates from Brazil: monocyclic components of peach brown rot Sthela Siqueira Angeli1 Louise Larissa May De Mio2 Lilian Amorim1 1Escola Superior de Agricultura Luiz de Queiroz, Universidade de São Paulo (USP), Piracicaba, SP, Brasil. 2Universidade Federal do Paraná, Rua dos Funcionários, 1540, 80035-050, Curitiba, PR, Brasil. E-mail: [email protected]. Corresponding author. ABSTRACT: Brown rot is the most important disease of peaches in Brazil. The objective of this study was to compare the brown rot monocyclic components from Monilinia fructicola and M. laxa isolates from Brazil on peaches, due to the detection of M. laxa in the São Paulo production area. Conidia germination and pathogen sporulation were assessed in vitro under a temperature range of 5-35oC and wetness duration of 6-48h. Incubation and latent periods, disease incidence, disease severity and pathogen reproduction on peach fruit were evaluated under 10, 15, 20, 25 and 30oC and wetness duration of 6, 12 and 24h. Six of seven parameters of a generalised beta function fitted to conidia germination of M. fructicola and M. laxa were similar. Only the shape parameter was higher for M. fructicola indicating that the range of temperatures and wetness periods favourable for germination is wider for M. laxa than for M. fructicola. The optimum temperature for brown rot development caused by M. -
Peach Brown Rot: Still in Search of an Ideal Management Option
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repositorio Universidad de Zaragoza agriculture Review Peach Brown Rot: Still in Search of an Ideal Management Option Vitus Ikechukwu Obi 1,2, Juan José Barriuso 2 and Yolanda Gogorcena 1,* ID 1 Experimental Station of Aula Dei-CSIC, Avda de Montañana 1005, 50059 Zaragoza, Spain; [email protected] 2 AgriFood Institute of Aragon (IA2), CITA-Universidad de Zaragoza, 50013 Zaragoza, Spain; [email protected] * Correspondence: [email protected]; Tel.: +34-97-671-6133 Received: 15 June 2018; Accepted: 4 August 2018; Published: 9 August 2018 Abstract: The peach is one of the most important global tree crops within the economically important Rosaceae family. The crop is threatened by numerous pests and diseases, especially fungal pathogens, in the field, in transit, and in the store. More than 50% of the global post-harvest loss has been ascribed to brown rot disease, especially in peach late-ripening varieties. In recent years, the disease has been so manifest in the orchards that some stone fruits were abandoned before harvest. In Spain, particularly, the disease has been associated with well over 60% of fruit loss after harvest. The most common management options available for the control of this disease involve agronomical, chemical, biological, and physical approaches. However, the effects of biochemical fungicides (biological and conventional fungicides), on the environment, human health, and strain fungicide resistance, tend to revise these control strategies. This review aims to comprehensively compile the information currently available on the species of the fungus Monilinia, which causes brown rot in peach, and the available options to control the disease. -
Table of Contents
Table of Contents Table of Contents ............................................................................................................ 1 Authors, Reviewers, Draft Log ........................................................................................ 3 Introduction to Reference ................................................................................................ 5 Introduction to Stone Fruit ............................................................................................. 10 Arthropods ................................................................................................................... 16 Primary Pests of Stone Fruit (Full Pest Datasheet) ....................................................... 16 Adoxophyes orana ................................................................................................. 16 Bactrocera zonata .................................................................................................. 27 Enarmonia formosana ............................................................................................ 39 Epiphyas postvittana .............................................................................................. 47 Grapholita funebrana ............................................................................................. 62 Leucoptera malifoliella ........................................................................................... 72 Lobesia botrana .................................................................................................... -
Monilinia Fructicola, Monilinia Laxa and Monilinia Fructigena, the Causal Agents of Brown Rot on Stone Fruits Rita M
De Miccolis Angelini et al. BMC Genomics (2018) 19:436 https://doi.org/10.1186/s12864-018-4817-4 RESEARCH ARTICLE Open Access De novo assembly and comparative transcriptome analysis of Monilinia fructicola, Monilinia laxa and Monilinia fructigena, the causal agents of brown rot on stone fruits Rita M. De Miccolis Angelini* , Domenico Abate, Caterina Rotolo, Donato Gerin, Stefania Pollastro and Francesco Faretra Abstract Background: Brown rots are important fungal diseases of stone and pome fruits. They are caused by several Monilinia species but M. fructicola, M. laxa and M. fructigena are the most common all over the world. Although they have been intensively studied, the availability of genomic and transcriptomic data in public databases is still scant. We sequenced, assembled and annotated the transcriptomes of the three pathogens using mRNA from germinating conidia and actively growing mycelia of two isolates of opposite mating types per each species for comparative transcriptome analyses. Results: Illumina sequencing was used to generate about 70 million of paired-end reads per species, that were de novo assembled in 33,861 contigs for M. fructicola, 31,103 for M. laxa and 28,890 for M. fructigena. Approximately, 50% of the assembled contigs had significant hits when blasted against the NCBI non-redundant protein database and top-hits results were represented by Botrytis cinerea, Sclerotinia sclerotiorum and Sclerotinia borealis proteins. More than 90% of the obtained sequences were complete, the percentage of duplications was always less than 14% and fragmented and missing transcripts less than 5%. Orthologous transcripts were identified by tBLASTn analysis using the B. -
European Journal of Plant Pathology
European Journal of Plant Pathology Antifungal effect of chito-oligosaccharides with different degrees of polymerization --Manuscript Draft-- Manuscript Number: EJPP-D-14-00032R2 Full Title: Antifungal effect of chito-oligosaccharides with different degrees of polymerization Article Type: Original Research (full papers) Keywords: Botrytis cinerea; Mucor piriformis; Chitosan; chito-oligosaccharides (CHOS); antifungal; Plant protection Corresponding Author: Morten Sørlie, PhD Aas, NORWAY Corresponding Author Secondary Information: Corresponding Author's Institution: Corresponding Author's Secondary Institution: First Author: Hafizur Rahman First Author Secondary Information: Order of Authors: Hafizur Rahman Lina G Hjeljord Berit B Aam Morten Sørlie, PhD Arne Tronsmo Order of Authors Secondary Information: Abstract: Chitosan, obtained from chitin by partial N-deacetylation, shows little or no toxicity towards mammalian cells, is biodegradable, and non-allergenic. It is known that chitosan may have antifungal properties, but the effect of defined chitosan or chito- oligosaccharides (CHOS) with different degree of polymerization is not well known. The objective of this study was to produce CHOS with different DPn (average degree of polymerization) and determine the most effective DPn of chitosan and CHOS against Botrytris cinerea Pers. Ex Fr. and Mucor piriformis Fischer. In vitro testing showed that CHOS of DPn 23 and 40 had the highest germination inhibition against the tested pathogens. The original chitosan (DPn 206) and a collection of short CHOS (degree of polymerization of 3-10) were significantly (P<0.01) less effective than CHOS of DPn 23 and 40. M. piriformis M119J showed the most abnormal swelling in presence of CHOS DPn 40, but all abnormally swollen conidia showed further germ tube elongation. -
Notes on Ascomycetes 11: Discomycetes
ACTA BOT. ISL. 10: 31-36, 1990. Notes on Ascomycetes 11: Discomycetes Helgi Hallgrfmsson and Henrik F. G~tzsche Lagarasi 2, 700 Egilsstaoir, Iceland and Institut for Sporeplanter, 0ster-Farirnagsgade 2D, 1353 Copenhagen K, Denmark ABSTRACT: Sixteen species of, Helotiales and Pezizales (Discomy cetes) are recorded, whereof 9 species are new to the Icelandic flora: Lachnellula suecica. Ciboria polygoni, Peziza cf. cerea, Peziza fimeti. Peziza granulosa. Geopora sp.. Melastiza eha teri, Otide8 cf. alutacea and T8rzetta spurcata. HELOTIALES Helotiaceae ASCOCORYNE SARCOIDES (Jacq.) Groves & Wils. The species was reported by ROSTRUP (1903, p.313) under the name Coryne sarcoides (Jacq.) Tul., from Halssk6gur in N-Ice land, based on a specimen collected by 6lafur Daviosson. It has been found many times in the Public Park in Akureyri (AMNH 199, 9958), growing on stumps of different trees, mainly Betula and Sorbus spp., also in Arnarh6ll near Akureyri, in a garden. In SW-Iceland it has been found by Eirikur Jensson in Fossvogur 1988, and in Vifilsstaoahlio near Hafnarfjorour 1978. In the East it has been collected in the forests of Egilsstaoir and Hallormsstaour in 1987-1988 (AMNH 11642, 11856). The growing season is from late August to October. Since the species is rarely found in the ascus-state, it can not be ascertained whether A. cylichnum might also be present in the material or not. Hyaloscyphaceae HYMENOSCYPHUS cf. CALYCULUS (Sow.) Phill. The species was reported by ROSTRUP (1903, p. 315) as Phialea virgultorum (Vahl.) Sacc., from Halssk6gur and Horgar- 32 ACTA BOTANICA ISLANDICA NO. 10 dalur, N. -Iceland, collected by 6lafur Daviosson on branches of Betula pubescens and Salix lanata.