Infectious Waterborne Diseases
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An Atlas of Potentially Water-Related Diseases in South Africa
AN ATLAS OF POTENTIALLY WATER-RELATED DISEASES IN SOUTH AFRICA Volume 2 Bibliography Report to the WATER RESEARCH COMMISSION by N Coetzee and D E Bourne Department of Community Health University of Cape Town Medical School WRC Report no. 584/2/96 ISBN 1 86845 245 X ISBN Set No 1 86845 246 8 1 CONTENTS VOLUME 2 BIBLIOGRAPHY 1 Introduction 2 2 Amoebiasis 3 3 Arthropod-borne viral diseases 7 4 Cholera 10 5 Diarrhoeal diseases in childhood 14 6 Viral hepatitis A and E 17 7 Leptospirosis 20 3 Pediculosis 22 9 Malaria 23 10 Poliomyelitis 29 11 Scabies 33 12 Schistosomiasis 35 13 Trachoma 39 14 Typhoid Fever 42 15 Intestinal helminthiasis 46 1. INTRODUCTION As many professionals involved in the management of water resources do not have a medical or public health background, it was thought that an explanatory bibliography of the major water related diseases in South Africa would be of use. Each section of the bibliography has (where appropriate) the following sections: 1. Aetiology 2. Transmission 3. Preventive and curative steps 4. South African data 5. References The MEDLINE data base of the national Library of Medicine, Washington DC, and the WATERLIT data base of the CSIR were searched. These were supplemented by South African journals and reports not appearing in the MEDLINE data base. 3 2. AMOEBIASIS 2.1. Aetiology The protozoan parasite Entamoeba histolytica which causes amoebiasis may exist as a hardy infective cyst or a more fragile and potentially pathogenic trophozoite (the "amoebic" form). Amoebiasis most commonly affects the colon and rectum as primary sitas of infection, with extraintestinal (most commonly liver abscesses), local or systemic, spread possible if not treated early. -
Gnathostoma Spinigerum Was Positive
Department Medicine Diagnostic Centre Swiss TPH Winter Symposium 2017 Helminth Infection – from Transmission to Control Sushi Worms – Diagnostic Challenges Beatrice Nickel Fish-borne helminth infections Consumption of raw or undercooked fish - Anisakis spp. infections - Gnathostoma spp. infections Case 1 • 32 year old man • Admitted to hospital with severe gastric pain • Abdominal pain below ribs since a week, vomiting • Low-grade fever • Physical examination: moderate abdominal tenderness • Laboratory results: mild leucocytosis • Patient revealed to have eaten sushi recently • Upper gastrointestinal endoscopy was performed Carmo J, et al. BMJ Case Rep 2017. doi:10.1136/bcr-2016-218857 Case 1 Endoscopy revealed 2-3 cm long helminth Nematode firmly attached to / Endoscopic removal of larva with penetrating gastric mucosa a Roth net Carmo J, et al. BMJ Case Rep 2017. doi:10.1136/bcr-2016-218857 Anisakiasis Human parasitic infection of gastrointestinal tract by • herring worm, Anisakis spp. (A.simplex, A.physeteris) • cod worm, Pseudoterranova spp. (P. decipiens) Consumption of raw or undercooked seafood containing infectious larvae Highest incidence in countries where consumption of raw or marinated fish dishes are common: • Japan (sashimi, sushi) • Scandinavia (cod liver) • Netherlands (maatjes herrings) • Spain (anchovies) • South America (ceviche) Source: http://parasitewonders.blogspot.ch Life Cycle of Anisakis simplex (L1-L2 larvae) L3 larvae L2 larvae L3 larvae Source: Adapted to Audicana et al, TRENDS in Parasitology Vol.18 No. 1 January 2002 Symptoms Within few hours of ingestion, the larvae try to penetrate the gastric/intestinal wall • acute gastric pain or abdominal pain • low-grade fever • nausea, vomiting • allergic reaction possible, urticaria • local inflammation Invasion of the third-stage larvae into gut wall can lead to eosinophilic granuloma, ulcer or even perforation. -
Estimating the Instantaneous Asymptomatic Proportion with a Simple Approach: Exemplified with the Publicly Available COVID-19 Surveillance Data in Hong Kong
ORIGINAL RESEARCH published: 03 May 2021 doi: 10.3389/fpubh.2021.604455 Estimating the Instantaneous Asymptomatic Proportion With a Simple Approach: Exemplified With the Publicly Available COVID-19 Surveillance Data in Hong Kong Chunyu Li 1†, Shi Zhao 2,3*†, Biao Tang 4,5, Yuchen Zhu 1, Jinjun Ran 6, Xiujun Li 1*‡ and Daihai He 7*‡ 1 2 Edited by: Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China, JC 3 Catherine Ropert, School of Public Health and Primary Care, Chinese University of Hong Kong, Hong Kong, China, Chinese University of 4 Federal University of Minas Hong Kong (CUHK) Shenzhen Research Institute, Shenzhen, China, School of Mathematics and Statistics, Xi’an Jiaotong 5 Gerais, Brazil University, Xi’an, China, Laboratory for Industrial and Applied Mathematics, Department of Mathematics and Statistics, York University, Toronto, ON, Canada, 6 School of Public Health, Li Ka Shing Faculty of Medicine, University of Hong Kong, Reviewed by: Hong Kong, China, 7 Department of Applied Mathematics, Hong Kong Polytechnic University, Hong Kong, China Mohammad Javanbakht, Baqiyatallah University of Medical Sciences, Iran Background: The asymptomatic proportion is a critical epidemiological characteristic Changjing Zhuge, that modulates the pandemic potential of emerging respiratory virus, which may vary Beijing University of Technology, China *Correspondence: depending on the nature of the disease source, population characteristics, source–host Daihai He interaction, and environmental factors. [email protected] Xiujun Li Methods: We developed a simple likelihood-based framework to estimate the [email protected] instantaneous asymptomatic proportion of infectious diseases. Taking the COVID-19 Shi Zhao epidemics in Hong Kong as a case study, we applied the estimation framework [email protected] to estimate the reported asymptomatic proportion (rAP) using the publicly available † These authors share first authorship surveillance data. -
Revealing the Secret Lives of Cryptic Species: Examining the Phylogenetic Relationships of Echinostome Parasites in North America
ARTICLE IN PRESS Molecular Phylogenetics and Evolution xxx (2010) xxx–xxx Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Revealing the secret lives of cryptic species: Examining the phylogenetic relationships of echinostome parasites in North America Jillian T. Detwiler *, David H. Bos, Dennis J. Minchella Purdue University, Biological Sciences, Lilly Hall, 915 W State St, West Lafayette, IN 47907, USA article info abstract Article history: The recognition of cryptic parasite species has implications for evolutionary and population-based stud- Received 10 August 2009 ies of wildlife and human disease. Echinostome trematodes are a widely distributed, species-rich group of Revised 3 January 2010 internal parasites that infect a wide array of hosts and are agents of disease in amphibians, mammals, and Accepted 5 January 2010 birds. We utilize genetic markers to understand patterns of morphology, host use, and geographic distri- Available online xxxx bution among several species groups. Parasites from >150 infected host snails (Lymnaea elodes, Helisoma trivolvis and Biomphalaria glabrata) were sequenced at two mitochondrial genes (ND1 and CO1) and one Keywords: nuclear gene (ITS) to determine whether cryptic species were present at five sites in North and South Cryptic species America. Phylogenetic and network analysis demonstrated the presence of five cryptic Echinostoma lin- Echinostomes Host specificity eages, one Hypoderaeum lineage, and three Echinoparyphium lineages. Cryptic life history patterns were Molecular phylogeny observed in two species groups, Echinostoma revolutum and Echinostoma robustum, which utilized both Parasites lymnaied and planorbid snail species as first intermediate hosts. Molecular evidence confirms that two Trematodes species, E. -
Gastrointestinal Helminthic Parasites of Habituated Wild Chimpanzees
Aus dem Institut für Parasitologie und Tropenveterinärmedizin des Fachbereichs Veterinärmedizin der Freien Universität Berlin Gastrointestinal helminthic parasites of habituated wild chimpanzees (Pan troglodytes verus) in the Taï NP, Côte d’Ivoire − including characterization of cultured helminth developmental stages using genetic markers Inaugural-Dissertation zur Erlangung des Grades eines Doktors der Veterinärmedizin an der Freien Universität Berlin vorgelegt von Sonja Metzger Tierärztin aus München Berlin 2014 Journal-Nr.: 3727 Gedruckt mit Genehmigung des Fachbereichs Veterinärmedizin der Freien Universität Berlin Dekan: Univ.-Prof. Dr. Jürgen Zentek Erster Gutachter: Univ.-Prof. Dr. Georg von Samson-Himmelstjerna Zweiter Gutachter: Univ.-Prof. Dr. Heribert Hofer Dritter Gutachter: Univ.-Prof. Dr. Achim Gruber Deskriptoren (nach CAB-Thesaurus): chimpanzees, helminths, host parasite relationships, fecal examination, characterization, developmental stages, ribosomal RNA, mitochondrial DNA Tag der Promotion: 10.06.2015 Contents I INTRODUCTION ---------------------------------------------------- 1- 4 I.1 Background 1- 3 I.2 Study objectives 4 II LITERATURE OVERVIEW --------------------------------------- 5- 37 II.1 Taï National Park 5- 7 II.1.1 Location and climate 5- 6 II.1.2 Vegetation and fauna 6 II.1.3 Human pressure and impact on the park 7 II.2 Chimpanzees 7- 12 II.2.1 Status 7 II.2.2 Group sizes and composition 7- 9 II.2.3 Territories and ranging behavior 9 II.2.4 Diet and hunting behavior 9- 10 II.2.5 Contact with humans 10 II.2.6 -
Globalization and Infectious Diseases: a Review of the Linkages
TDR/STR/SEB/ST/04.2 SPECIAL TOPICS NO.3 Globalization and infectious diseases: A review of the linkages Social, Economic and Behavioural (SEB) Research UNICEF/UNDP/World Bank/WHO Special Programme for Research & Training in Tropical Diseases (TDR) The "Special Topics in Social, Economic and Behavioural (SEB) Research" series are peer-reviewed publications commissioned by the TDR Steering Committee for Social, Economic and Behavioural Research. For further information please contact: Dr Johannes Sommerfeld Manager Steering Committee for Social, Economic and Behavioural Research (SEB) UNDP/World Bank/WHO Special Programme for Research and Training in Tropical Diseases (TDR) World Health Organization 20, Avenue Appia CH-1211 Geneva 27 Switzerland E-mail: [email protected] TDR/STR/SEB/ST/04.2 Globalization and infectious diseases: A review of the linkages Lance Saker,1 MSc MRCP Kelley Lee,1 MPA, MA, D.Phil. Barbara Cannito,1 MSc Anna Gilmore,2 MBBS, DTM&H, MSc, MFPHM Diarmid Campbell-Lendrum,1 D.Phil. 1 Centre on Global Change and Health London School of Hygiene & Tropical Medicine Keppel Street, London WC1E 7HT, UK 2 European Centre on Health of Societies in Transition (ECOHOST) London School of Hygiene & Tropical Medicine Keppel Street, London WC1E 7HT, UK TDR/STR/SEB/ST/04.2 Copyright © World Health Organization on behalf of the Special Programme for Research and Training in Tropical Diseases 2004 All rights reserved. The use of content from this health information product for all non-commercial education, training and information purposes is encouraged, including translation, quotation and reproduction, in any medium, but the content must not be changed and full acknowledgement of the source must be clearly stated. -
Global Dynamics of a Vaccination Model for Infectious Diseases with Asymptomatic Carriers
MATHEMATICAL BIOSCIENCES doi:10.3934/mbe.2016019 AND ENGINEERING Volume 13, Number 4, August 2016 pp. 813{840 GLOBAL DYNAMICS OF A VACCINATION MODEL FOR INFECTIOUS DISEASES WITH ASYMPTOMATIC CARRIERS Martin Luther Mann Manyombe1;2 and Joseph Mbang1;2 Department of Mathematics, Faculty of Science University of Yaounde 1, P.O. Box 812 Yaounde, Cameroon 1;2;3; Jean Lubuma and Berge Tsanou ∗ Department of Mathematics and Applied Mathematics University of Pretoria, Pretoria 0002, South Africa (Communicated by Abba Gumel) Abstract. In this paper, an epidemic model is investigated for infectious dis- eases that can be transmitted through both the infectious individuals and the asymptomatic carriers (i.e., infected individuals who are contagious but do not show any disease symptoms). We propose a dose-structured vaccination model with multiple transmission pathways. Based on the range of the explic- itly computed basic reproduction number, we prove the global stability of the disease-free when this threshold number is less or equal to the unity. Moreover, whenever it is greater than one, the existence of the unique endemic equilibrium is shown and its global stability is established for the case where the changes of displaying the disease symptoms are independent of the vulnerable classes. Further, the model is shown to exhibit a transcritical bifurcation with the unit basic reproduction number being the bifurcation parameter. The impacts of the asymptomatic carriers and the effectiveness of vaccination on the disease transmission are discussed through through the local and the global sensitivity analyses of the basic reproduction number. Finally, a case study of hepatitis B virus disease (HBV) is considered, with the numerical simulations presented to support the analytical results. -
On Confinement and Quarantine Concerns on an SEIAR Epidemic
S S symmetry Article On Confinement and Quarantine Concerns on an SEIAR Epidemic Model with Simulated Parameterizations for the COVID-19 Pandemic Manuel De la Sen 1,* , Asier Ibeas 2 and Ravi P. Agarwal 3 1 Campus of Leioa, Institute of Research and Development of Processes IIDP, University of the Basque Country, 48940 Leioa (Bizkaia), Spain 2 Department of Telecommunications and Systems Engineering, Universitat Autònoma de Barcelona, UAB, 08193 Barcelona, Spain; [email protected] 3 Department of Mathematics, Texas A & M University, 700 Univ Blvd, Kingsville, TX 78363, USA; [email protected] * Correspondence: [email protected] Received: 7 September 2020; Accepted: 30 September 2020; Published: 7 October 2020 Abstract: This paper firstly studies an SIR (susceptible-infectious-recovered) epidemic model without demography and with no disease mortality under both total and under partial quarantine of the susceptible subpopulation or of both the susceptible and the infectious ones in order to satisfy the hospital availability requirements on bed disposal and other necessary treatment means for the seriously infectious subpopulations. The seriously infectious individuals are assumed to be a part of the total infectious being described by a time-varying proportional function. A time-varying upper-bound of those seriously infected individuals has to be satisfied as objective by either a total confinement or partial quarantine intervention of the susceptible subpopulation. Afterwards, a new extended SEIR (susceptible-exposed-infectious-recovered) epidemic model, which is referred to as an SEIAR (susceptible-exposed-symptomatic infectious-asymptomatic infectious-recovered) epidemic model with demography and disease mortality is given and focused on so as to extend the above developed ideas on the SIR model. -
Reproductive and Mate Choice Strategies in the Hermaphroditic
present in the five specimens analyzed miranda was found and thus we could not Analysis of the variability of Drosophila azteca and Dro- sophila athabasca populations revealed by random am- and absent in six D. persimilis and seven increase the sample size of that species. plified polymorphic DNA. J Zool Syst Evol Res 35:159– D. pseudoobscura of different origin. The Here we describe species-specific bands 164. number of specimens analyzed is small for of D. pseudoobscura, D. persimilis, and D. Pascual M, Balanya` J, Latorre A, and Serra L, 1997b. D. miranda, but since the lines used came miranda that discriminate between these Diagnosis of sibling species of Drosophila involved in the colonization of North America by Drosophila subob- from different localities (see Materials and three sibling species. These results, along scura. Mol Ecol 6:293–296. Methods), it can be assumed that these with those of a previous study using D. Powell JR, 1983. Interspecific cytoplasmic gene flow in bands are diagnostic. We estimated the azteca and D. athabasca (Pascual et al. the absence of nuclear gene flow: evidence from Dro- size of species-specific bands observed by 1997b) permit classification of all the spec- sophila. Proc Natl Acad Sci USA 80:492–495. Pascual et al. (1997b) in D. athabasca and imens collected in all samples of the dis- Prakash S, 1977. Genetic divergence in closely related D. azteca. A total of nine bands clearly tribution range of these five Nearctic spe- sibling species Drosophila pseudoobscura, D. persimilis and D. miranda. Evolution 31:14–23. identified D. -
Opisthorchiasis: an Emerging Foodborne Helminthic Zoonosis of Public Health Significance
IJMPES International Journal of http://ijmpes.com doi 10.34172/ijmpes.2020.27 Medical Parasitology & Vol. 1, No. 4, 2020, 101-104 eISSN 2766-6492 Epidemiology Sciences Review Article Opisthorchiasis: An Emerging Foodborne Helminthic Zoonosis of Public Health Significance Mahendra Pal1* ID , Dimitri Ketchakmadze2 ID , Nino Durglishvili3 ID , Yagoob Garedaghi4 ID 1Narayan Consultancy on Veterinary Public Health and Microbiology, Gujarat, India 2Faculty of Chemical Technologies and Metallurgy, Georgian Technical University, Tbilisi, Georgia 3Department of Sociology and Social Work, Ivane Javakhishvili Tbilisi State University, Tbilisi, Georgia 4Department of Parasitology, Tabriz Branch, Islamic Azad University, Tabriz, Iran Abstract Opisthorchiasis is an emerging foodborne parasitic zoonosis that has been reported from developing as well as developed nations of the world. Globally, around 80 million people are at risk of acquiring Opisthorchis infection. The source of infection is exogenous, and ingestion is considered as the primary mode of transmission. Humans get the infection by consuming raw or undercooked fish. In most cases, the infection remains asymptomatic. However, in affected individuals, the clinical manifestations are manifold. Occasionally, complications including cholangitis, cholecystitis, and cholangiocarcinoma are observed. The people who have the dietary habit of eating raw fish usually get the infection. Certain occupational groups, such as fishermen, agricultural workers, river fleet employees, and forest industry personnel are mainly infected with Opisthorchis. The travelers to the endemic regions who consume raw fish are exposed to the infection. Parasitological, immunological, and molecular techniques are employed to confirm the diagnosis of disease. Treatment regimens include oral administration of praziquantel and albendazole. In the absence of therapy, the acute phase transforms into a chronic one that may persist for two decades. -
Molecular Identification of the Etiological Agent of Human
Jpn. J. Infect. Dis., 73, 44–50, 2020 Original Article Molecular Identification of the Etiological Agent of Human Gnathostomiasis in an Endemic Area of Mexico Sylvia Paz Díaz-Camacho1, Jesús Ricardo Parra-Unda2, Julián Ríos-Sicairos2, and Francisco Delgado-Vargas2* 1Research Unit in Environment and Health, Autonomous University of Occident, Sinaloa; and 2Public Health Research Unit "Dra. Kaethe Willms", School of Chemical and Biological Sciences, Autonomous University of Sinaloa, University city, Culiacan, Sinaloa, Mexico SUMMARY: Human gnathostomiasis, which is endemic in Mexico, is a worldwide health concern. It is mainly caused by the consumption of raw or insufficiently cooked fish containing the advanced third-stage larvae (AL3A) of Gnathostoma species. The diagnosis of gnathostomiasis is based on epidemiological surveys and immunological diagnostic tests. When a larva is recovered, the species can be identified by molecular techniques. Polymerase chain reaction (PCR) amplification of the second internal transcription spacer (ITS-2) is useful to identify nematode species, including Gnathostoma species. This study aims to develop a duplex-PCR amplification method of the ITS-2 region to differentiate between the Gnathostoma binucleatum and G. turgidum parasites that coexist in the same endemic area, as well as to identify the Gnathostoma larvae recovered from the biopsies of two gnathostomiasis patients from Sinaloa, Mexico. The duplex PCR established based on the ITS- 2 sequence showed that the length of the amplicons was 321 bp for G. binucleatum and 226 bp for G. turgidum. The amplicons from the AL3A of both patients were 321 bp. Furthermore, the length and composition of these amplicons were identical to those deposited in GenBank as G. -
Gnathostomiasis: an Emerging Imported Disease David A.J
RESEARCH Gnathostomiasis: An Emerging Imported Disease David A.J. Moore,* Janice McCroddan,† Paron Dekumyoy,‡ and Peter L. Chiodini† As the scope of international travel expands, an ous complication of central nervous system involvement increasing number of travelers are coming into contact with (4). This form is manifested by painful radiculopathy, helminthic parasites rarely seen outside the tropics. As a which can lead to paraplegia, sometimes following an result, the occurrence of Gnathostoma spinigerum infection acute (eosinophilic) meningitic illness. leading to the clinical syndrome gnathostomiasis is increas- We describe a series of patients in whom G. spinigerum ing. In areas where Gnathostoma is not endemic, few cli- nicians are familiar with this disease. To highlight this infection was diagnosed at the Hospital for Tropical underdiagnosed parasitic infection, we describe a case Diseases, London; they were treated over a 12-month peri- series of patients with gnathostomiasis who were treated od. Four illustrative case histories are described in detail. during a 12-month period at the Hospital for Tropical This case series represents a small proportion of gnathos- Diseases, London. tomiasis patients receiving medical care in the United Kingdom, in whom this uncommon parasitic infection is mostly undiagnosed. he ease of international travel in the 21st century has resulted in persons from Europe and other western T Methods countries traveling to distant areas of the world and return- The case notes of patients in whom gnathostomiasis ing with an increasing array of parasitic infections rarely was diagnosed at the Hospital for Tropical Diseases were seen in more temperate zones. One example is infection reviewed retrospectively for clinical symptoms and confir- with Gnathostoma spinigerum, which is acquired by eating uncooked food infected with the larval third stage of the helminth; such foods typically include fish, shrimp, crab, crayfish, frog, or chicken.