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Planktothrix Agardhii É a Mais Comum
Accessing Planktothrix species diversity and associated toxins using quantitative real-time PCR in natural waters Catarina Isabel Prata Pereira Leitão Churro Doutoramento em Biologia Departamento Biologia 2015 Orientador Vitor Manuel de Oliveira e Vasconcelos, Professor Catedrático Faculdade de Ciências iv FCUP Accessing Planktothrix species diversity and associated toxins using quantitative real-time PCR in natural waters The research presented in this thesis was supported by the Portuguese Foundation for Science and Technology (FCT, I.P.) national funds through the project PPCDT/AMB/67075/2006 and through the individual Ph.D. research grant SFRH/BD65706/2009 to Catarina Churro co-funded by the European Social Fund (Fundo Social Europeu, FSE), through Programa Operacional Potencial Humano – Quadro de Referência Estratégico Nacional (POPH – QREN) and Foundation for Science and Technology (FCT). The research was performed in the host institutions: National Institute of Health Dr. Ricardo Jorge (INSA, I.P.), Lisboa; Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), Porto and Centre for Microbial Resources (CREM - FCT/UNL), Caparica that provided the laboratories, materials, regents, equipment’s and logistics to perform the experiments. v FCUP Accessing Planktothrix species diversity and associated toxins using quantitative real-time PCR in natural waters vi FCUP Accessing Planktothrix species diversity and associated toxins using quantitative real-time PCR in natural waters ACKNOWLEDGMENTS I would like to express my gratitude to my supervisor Professor Vitor Vasconcelos for accepting to embark in this research and supervising this project and without whom this work would not be possible. I am also greatly thankful to my co-supervisor Elisabete Valério for the encouragement in pursuing a graduate program and for accompanying me all the way through it. -
Harmful Cyanobacteria Blooms and Their Toxins In
Harmful cyanobacteria blooms and their toxins in Clear Lake and the Sacramento-San Joaquin Delta (California) 10-058-150 Surface Water Ambient Monitoring Program (SWAMP) Prepared for: Central Valley Regional Water Quality Control Board 11020 Sun Center Drive, Suite 200 Rancho Cordova, CA 95670 Prepared by: Cécile Mioni (Project Director) & Raphael Kudela (Project co-Director) University of California, Santa Cruz - Institute of Marine Sciences Dolores Baxa (Project co-Director) University of California, Davis – School of Veterinary Medicine Contract manager: Meghan Sullivan Central Valley Regional Water Quality Control Board _________________ With technical contributions by: Kendra Hayashi (Project manager), UCSC Thomas Smythe (Field Officer) and Chris White, Lake County Water Resources Scott Waller (Field Officer) and Brianne Sakata, EMP/DWR Tomo Kurobe (Molecular Biologist), UCD David Crane (Toxicology), DFG-WPCL Kim Ward, SWRCB/DWQ Lenny Grimaldo (Assistance for Statistic Analyses), Bureau of Reclamation Peter Raimondi (Assistance for Statistic Analyses), UCSC Karen Tait, Lake County Health Office Abstract Harmful cyanobacteria and their toxins are growing contaminants of concern. Noxious toxins produced by HC, collectively referred as cyanotoxins, reduce the water quality and may impact the supply of clean water for drinking as well as the water quality which directly impacts the livelihood of other species including several endangered species. USEPA recently (May 29, 2008) made the decision to add microcystin toxins as an additional cause of impairment for the Klamath River, CA. However, harmful cyanobacteria are some of the less studied causes of impairment in California water bodies and their distribution, abundance and dynamics, as well as the conditions promoting their proliferation and toxin production are not well characterized. -
Solutions for Managing Cyanobacterial Blooms
Solutions for managing cyanobacterial blooms A scientific summary for policy makers This report was prepared by the SCOR-IOC Scientific Steering Committee of the Global Ecology and Oceanography of Harmful Algal Blooms research programme GlobalHAB, with contributions from colleagues. GlobalHAB (since 2014) is an international programme that aims to improve understanding and prediction of HABs in aquatic ecosystems, and management and mitigation of their impacts, and is sponsored by the Scientific Committee on Oceanic Research (SCOR) and the Intergovernmental Oceanographic Commission (IOC) of UNESCO. Authors: M.A. Burford (Griffith University), C.J. Gobler (Stony Brook University), D.P. Hamilton (Griffith University), P.M. Visser (University of Amsterdam), M. Lurling (Wageningen University), G.A. Codd (University of Dundee). For bibliographic purposes this document should be cited as: M.A. Burford et al. 2019. Solutions for managing cyanobacterial blooms: A scientific summary for policy makers. IOC/UNESCO, Paris (IOC/INF-1382). This summary was prepared by academics from various universities and regions. This summary of solutions is published as a brief information with the understanding that the GlobalHAB sponsors, and contributing authors are supplying information but are not attempting to render engineering or other professional services. If such services are required, the assistance of appropriate professionals should be sought. Furthermore, the sponsors, and the authors do not endorse any products or commercial services mentioned in the text. The designations employed and the presentation of the material in this publication do not imply the expression of any opinion whatsoever on the part of the Secretariats of SCOR and IOC. Design by Liveworm Studio, Queensland College of Art, Griffith University. -
Genomic and Metabolic Comparison of Benthic and Planktic Strains
Research Collection Journal Article Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains Author(s): Pancrace, Claire; Barny, Marie-Anne; Ueoka, Reiko; Calteau, Alexandra; Scalvenzi, Thibault; Pédron, Jaques; Barbe, Valérie; Piel, Jörn; Humbert, Jean-François; Gugger, Muriel Publication Date: 2017-01-24 Permanent Link: https://doi.org/10.3929/ethz-b-000128455 Originally published in: Scientific Reports 7, http://doi.org/10.1038/srep41181 Rights / License: Creative Commons Attribution 4.0 International This page was generated automatically upon download from the ETH Zurich Research Collection. For more information please consult the Terms of use. ETH Library www.nature.com/scientificreports OPEN Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic Received: 04 October 2016 Accepted: 16 December 2016 strains Published: 24 January 2017 Claire Pancrace1,2,3, Marie-Anne Barny2, Reiko Ueoka4, Alexandra Calteau5, Thibault Scalvenzi1, Jacques Pédron2, Valérie Barbe6, Joern Piel4, Jean-François Humbert2 & Muriel Gugger1 Planktothrix is a dominant cyanobacterial genus forming toxic blooms in temperate freshwater ecosystems. We sequenced the genome of planktic and non planktic Planktothrix strains to better represent this genus diversity and life style at the genomic level. Benthic and biphasic strains are rooting the Planktothrix phylogenetic tree and widely expand the pangenome of this genus. We further investigated in silico the genetic potential dedicated to gas vesicles production, nitrogen fixation as well as natural product synthesis and conducted complementary experimental tests by cell culture, microscopy and mass spectrometry. Significant differences for the investigated features could be evidenced between strains of different life styles. The benthicPlanktothrix strains showed unexpected characteristics such as buoyancy, nitrogen fixation capacity and unique natural product features. -
Freshwater Phytoplankton ID SHEET
Aphanizomenon spp. Notes about Aphanizomenon: Freshwater Toxin: Saxitoxin N-fixation: Yes Phytoplankton Cyanophyta – Cyanophyceae – Nostocales 4 described species ID SHEET Trichomes solitary or gathered in small or large fascicles (clusters) with trichomes arranged in parallel layers. TARGET ALGAE Dillard, G. (1999). Credit: GreenWater Laboratories/CyanoLab Anabaena spp. Anabaena spp. Notes about Anabaena: (now Dolichospermum) (now Dolichospermum) akinete Toxin: Anatoxin-a N-fixation: Yes Cyanophyta – Cyanophyceae – Nostocales More than 80 known species heterocyte Trichomes are straight, curved or coiled, in some species with mucilaginous colorless envelopes, mat forming. heterocyte akinete Credit: GreenWater Laboratories/CyanoLab Credit: GreenWater Laboratories/CyanoLab Dillard, G. (1999). Credit: GreenWater Laboratories/CyanoLab Notes about Cylindrospermopsis: Toxin: Cylindrospermopsin N-fixation: Yes Cyanophyta – Cyanophyceae – Nostocales Around 10 known species Trichomes are straight, bent or spirally coiled. Cells are cylindrical or barrel-shaped pale blue- green or yellowish, with aerotypes. Heterocytes nWater Laboratories/CyanoLab and akinetes are terminal. Gree Credit: Cylindrospermopsis spp. Cylindrospermopsis spp. Straight morphotype Curved morphotype Dillard, G. (1999). Notes about Microcystis: K Toxin: Microcystin N-fixation: No Cyanophyta – Cyanophyceae – Chroococcales Around 25 known species Colonies are irregular, cloud-like with hollow spaces and sometimes with a well developed outer margin. Cells are spherical with may -
Roles of Nutrient Limitation on Western Lake Erie Cyanohab Toxin Production
toxins Article Roles of Nutrient Limitation on Western Lake Erie CyanoHAB Toxin Production Malcolm A. Barnard 1,* , Justin D. Chaffin 2, Haley E. Plaas 1 , Gregory L. Boyer 3, Bofan Wei 3, Steven W. Wilhelm 4 , Karen L. Rossignol 1, Jeremy S. Braddy 1, George S. Bullerjahn 5 , Thomas B. Bridgeman 6, Timothy W. Davis 5, Jin Wei 7, Minsheng Bu 7 and Hans W. Paerl 1,* 1 Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, NC 28557, USA; [email protected] (H.E.P.); [email protected] (K.L.R.); [email protected] (J.S.B.) 2 Stone Laboratory and Ohio Sea Grant, The Ohio State University, Put-In-Bay, OH 43456, USA; chaffi[email protected] 3 Department of Chemistry, State University of New York College of Environmental Science and Forestry Campus, Syracuse, NY 13210, USA; [email protected] (G.L.B.); [email protected] (B.W.) 4 Department of Microbiology, University of Tennessee at Knoxville, Knoxville, TN 37996, USA; [email protected] 5 Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA; [email protected] (G.S.B.); [email protected] (T.W.D.) 6 Lake Erie Center, University of Toledo, Oregon, OH 43616, USA; [email protected] 7 Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China; [email protected] (J.W.); [email protected] (M.B.) * Correspondence: [email protected] (M.A.B.); [email protected] (H.W.P.); Tel.: +1-252-726-6841 (ext. -
(Oscillatoriales: Phormidiaceae) in Earthen Fish Ponds, Northwestern
Sains Malaysiana 41(3)(2012): 277–284 Dynamics of Cyanobacteria Planktothrix species (Oscillatoriales: Phormidiaceae) in Earthen Fish Ponds, Northwestern Bangladesh (Kedinamikan Planktothrix spesies (Oscillatoriales: Phormidiaceae) dalam Kolam Ikan Bertanah Liat, Barat Laut Bangladesh) MD. YEAMIN HOSSAIN*, MD. ABU SAYED JEWEL, BERNERD FULANDA, FERDOUS AHAMED, SHARMEEN RAHMAN, SALEHA JASMINE & JUN OHTOMI ABSTRACT The seasonal abundance, dynamics and composition of the filamentous Cyanobacteria Planktothrix spp. was studied over a 1-year period in two storm-water-fed earthen fishponds in Rajshahi city, northwestern Bangladesh. Sampling was conducted monthly using plankton net (25 µm mesh size) and the samples preserved in 5% formalin. Water quality parameters including water temperature, transparency, pH, dissolved oxygen (DO), biological oxygen demand (BOD), + free carbon dioxide (CO2), nitrite-nitrogen (NO2-N), nitrate-nitrogen (NO3-N), ammonium (NH4 ), oxidation reduction index (rH2) were recorded during each sampling. Two species; Planktothrix agardhii and Planktothrix rubescens were identified during the study with P. agardhii recording higher abundance (p<0.05) all year round. The Planktothrix cell density was highest during March: 3.06×106 cells/L and 1.23×106 cells/L in Pond-1 and 2, respectively. The abundance of P. agardhii was relatively higher in spring. The cell densities increased with increasing temperature, pH, and nutrient concentration. Lower cell densities were recorded during periods of high BOD. The results of this study provide a useful guide for aquaculturists and other environmental scientists for the management of the cyanotoxin producing algal blooms of Planktothrix spp. in fertilized fish ponds and other aquatic habitats. Keywords: Bangladesh; earthen fish pond;Planktothrix ; seasonal dynamics; storm run-off ABSTRAK Kelimpahan, kedinamikan dan komposisi bermusim Cyanobacteria Planktothrix spp. -
(Cyanobacterial Genera) 2014, Using a Polyphasic Approach
Preslia 86: 295–335, 2014 295 Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach Taxonomické hodnocení cyanoprokaryot (cyanobakteriální rody) v roce 2014 podle polyfázického přístupu Jiří K o m á r e k1,2,JanKaštovský2, Jan M a r e š1,2 & Jeffrey R. J o h a n s e n2,3 1Institute of Botany, Academy of Sciences of the Czech Republic, Dukelská 135, CZ-37982 Třeboň, Czech Republic, e-mail: [email protected]; 2Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-370 05 České Budějovice, Czech Republic; 3Department of Biology, John Carroll University, University Heights, Cleveland, OH 44118, USA Komárek J., Kaštovský J., Mareš J. & Johansen J. R. (2014): Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach. – Preslia 86: 295–335. The whole classification of cyanobacteria (species, genera, families, orders) has undergone exten- sive restructuring and revision in recent years with the advent of phylogenetic analyses based on molecular sequence data. Several recent revisionary and monographic works initiated a revision and it is anticipated there will be further changes in the future. However, with the completion of the monographic series on the Cyanobacteria in Süsswasserflora von Mitteleuropa, and the recent flurry of taxonomic papers describing new genera, it seems expedient that a summary of the modern taxonomic system for cyanobacteria should be published. In this review, we present the status of all currently used families of cyanobacteria, review the results of molecular taxonomic studies, descriptions and characteristics of new orders and new families and the elevation of a few subfamilies to family level. -
The Role of Nitrogen Availability on the Dominance of Planktothrix Agardhii in Sandusky Bay, Lake Erie
THE ROLE OF NITROGEN AVAILABILITY ON THE DOMINANCE OF PLANKTOTHRIX AGARDHII IN SANDUSKY BAY, LAKE ERIE Daniel H. Peck A Thesis Submitted to the Graduate College of Bowling Green State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE August 2020 Committee: George Bullerjahn, Advisor Timothy Davis Robert McKay © 2020 Daniel H. Peck All Rights Reserved iii ABSTRACT George S. Bullerjahn, Advisor Sandusky Bay and Lake Erie are plagued with harmful algal blooms every summer. Sandusky Bay is a drowned river mouth that is very shallow and turbid and is dominated by Planktothrix agardhii, while Lake Erie is dominated by Microcystis aeruginosa. Both species of cyanobacterium are non-diazotrophic and produce microcystin, a hepatotoxin. A competition experiment was conducted culturing both species alone and in coculture at nitrogen (nitrate) replete, nitrate restricted, and nitrogen-free environments. Planktothrix grew better alone at nitrogen restricted medium than in co-culture with Microcystis. In coculture, Microcystis was dominant over Planktothrix however, that dominance decreased as nitrogen was reduced in each treatment. In the nitrogen replete environment, the coculture produced significantly more toxin than the monocultures and in the no nitrogen environment the Planktothrix monoculture produced more toxin than the Microcystis monoculture or the coculture. The community composition in Sandusky Bay was monitored over the winter and spring months (January-April) to see how it changed as time progressed. Nutrient amendment experiments were also conducted adding nitrate, phosphate, and a combination of nitrate and phosphate to stimulate growth and identify any possible nutrient limitations. The initial community yielded low cell densities until the temperature increased and cell abundances followed shortly thereafter. -
The Effect of Temperature on the Toxicity of Planktothrix Agardhii
THE EFFECT OF TEMPERATURE ON THE TOXICITY OF PLANKTOTHRIX AGARDHII Christina Moore A Thesis Submitted to the Graduate College of Bowling Green State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE May 2020 Committee: George Bullerjahn, Advisor Timothy Davis Robert Michael McKay © 2019 Christina Moore All Rights Reserved iii ABSTRACT George Bullerjahn, Advisor The western basin of Lake Erie has experienced issues with cyanobacterial harmful algal blooms (cHABs) since the 1960s due to various factors over the decades. This resulted in a service shutdown in Northwest Ohio in August of 2014, leaving at least 400,000 people without drinking water for three days. Since then, research has been conducted to learn about two of the cyanobacterial species that reside in western Lake Erie. One of these species is Planktothrix agardhii, a filamentous cyanobacteria species that resides in Sandusky Bay due to nitrogen depletion in the bay. While previous work has looked at the physical and physiological factors that influence the growth of Planktothrix and other cyanobacteria, there are only a few that have looked at factors that drive microcystin production, a toxin found in Plantktothrix, and why these toxins have been produced in the first place. These papers have different ideas as to the purpose of these toxins. A strain of Planktothrix agardhii was grown and acclimated in a growth chamber with ten different temperatures to see how temperature affected the toxicity of the cultures. This involved looking at the cell density, toxin quota, and toxin quota per cell of samples collected during the experiment. -
Chapter 3. CYANOBACTERIAL TOXINS
Toxic Cyanobacteria in Water: A guide to their public health consequences, monitoring and management Edited by Ingrid Chorus and Jamie Bartram © 1999 WHO ISBN 0-419-23930-8 Chapter 3. CYANOBACTERIAL TOXINS This chapter was prepared by Kaarina Sivonen and Gary Jones The cyanotoxins are a diverse group of natural toxins, both from the chemical and the toxicological points of view. In spite of their aquatic origin, most of the cyanotoxins that have been identified to date appear to be more hazardous to terrestrial mammals than to aquatic biota. Cyanobacteria produce a variety of unusual metabolites, the natural function of which is unclear, although some, perhaps only coincidentally, elicit effects upon other biota. Research has primarily focused on compounds that impact upon humans and livestock, either as toxins or as pharmaceutically useful substances. Further ranges of non-toxic products are also being found in cyanobacteria and the biochemical and pharmacological properties of these are totally unknown. An overview of the currently identified cyanotoxins is given in section 3.1 and their toxicological properties are discussed in Chapter 4. Studies on the occurrence, distribution and frequency of toxic cyanobacteria were conducted in a number of countries during the 1980s using mouse bioassay. Analytical methods suitable for quantitative toxin determination only became available in the late 1980s, but studies of specific cyanotoxins have been increasing since then. The results of both approaches indicate that neurotoxins are generally less common, except perhaps in some countries where they frequently cause lethal animal poisonings. In contrast, the cyclic peptide toxins (microcystins and nodularins) which primarily cause liver injury are more widespread and are very likely to occur if certain taxa of cyanobacteria are present. -
Visual Identification of Cyanobacteria Blooms (Also Referred to As Blue-Green Algae Blooms)
Visual Identification of Cyanobacteria Blooms (also referred to as blue-green algae blooms) With some practice, cyanobacteria blooms can usually be visually distin- guished from green algae blooms and duckweed without using a micro- scope. This document contains: General tips on the differences between cyanobacteria blooms and green algae blooms and the aquatic plant duckweed. A photo gallery of Ohio cyanobacteria blooms produced by different types of cyanobacteria and their associated toxin levels (if available). Photomicrographs of the most common toxin-producing cyanobacteria genera. Examples of green algae blooms and duckweed, for comparison pur- poses. The photomicrographs are included since it is generally not possible to de- termine the type of cyanobacteria present in a bloom without use of a mi- croscope, and different genera can produce different toxins. Please be aware that bloom severity is not always a good indication of toxin concentration. While most cyanobacteria blooms that appear minor will only have very low levels of toxins present, in other cases minor blooms may have higher concentrations of toxins. This may be because when cyanobacteria cells die they can release toxins present within their cells. A photo taken at the end of a bloom cycle, after it starts to dissipate, may look like a minor bloom, but toxin levels are still high. In addition, some cyanobacteria are more likely to produce toxins than others, so it is often difficult to assess toxin concentrations by visual evidence alone. Cyanobacteria (also referred to as blue-green algae) Microcystis bloom Anabaena bloom Planktothrix & Anabaena bloom Cyanobacteria can be distributed throughout the water or they can float to form scums on or near the surface.