Design Principles of the Hippocampal Cognitive Map
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Grid Cells Are Ubiquitous in Neural Networks
Grid Cells Are Ubiquitous in Neural Networks Songlin Li1†, Yangdong Deng2*†, Zhihua Wang1 1 Department of Microelectronics and Nanoelectronics, Tsinghua University 2 School of Software, Tsinghua University * Corresponding author: Email [email protected] † The two authors contributed equally to this work. Abstract: Grid cells are believed to play an important role in both spatial and non-spatial cognition tasks. A recent study observed the emergence of grid cells in an LSTM for path integration. The connection between biological and artificial neural networks underlying the seemingly similarity, as well as the application domain of grid cells in deep neural networks (DNNs), expect further exploration. This work demonstrated that grid cells could be replicated in either pure vision based or vision guided path integration DNNs for navigation under a proper setting of training parameters. We also show that grid-like behaviors arise in feedforward DNNs for non-spatial tasks. Our findings support that the grid coding is an effective representation for both biological and artificial networks. Introduction: It has been long hypothesized that animals use a “cognitive map”1, namely, an internal knowledge representation to support intelligent behaviors. This proposal was later proved by neuroscience experiments on both spatial2,3 and non-spatial4,5 cognition tasks. Grid cells, which exhibit a spatial periodic firing pattern and thus constitute the hexagonal spatial representation as Fyhn et al has observed2, were discovered in the medial entorhinal cortex (MEC) of rodents2,3. Subsequent studies proposed models to characterize the behavior of grid cells in terms of spike-timing correlations6-8. The discovery of grid cells as well as the fact that different grid cells forms a multi-scale representation inspired the theory of vector-based navigation9. -
Marine Vehicles Localization Using Grid Cells for Path Integration
Marine Vehicles Localization Using Grid Cells for Path Integration Ignacio Carluchoa, Manuel F. Baileya, Mariano De Paulab, Corina Barbalataa [email protected], [email protected], mariano.depaula@fio.unicen.edu.ar, [email protected] a Department of Mechanical Engineering, Louisiana State University, Baton Rouge, USA b INTELYMEC Group, Centro de Investigaciones en F´ısica e Ingenier´ıa del Centro CIFICEN – UNICEN – CICpBA – CONICET, 7400 Olavarr´ıa, Argentina Abstract—Autonomous Underwater Vehicles (AUVs) are plat- forms used for research and exploration of marine environments. However, these types of vehicles face many challenges that hinder their widespread use in the industry. One of the main limitations is obtaining accurate position estimation, due to the lack of GPS signal underwater. This estimation is usually done with Kalman filters. However, new developments in the neuroscience field have shed light on the mechanisms by which mammals are able to obtain a reliable estimation of their current position based on external and internal motion cues. A new type of neuron, called Grid cells, has been shown to be part of path integration system in the brain. In this article, we show how grid cells can be used for obtaining a position estimation of underwater vehicles. The model of grid cells used requires only the linear velocities together with heading orientation and provides a reliable estimation of the vehicle’s position. We provide simulation results for an AUV which show the feasibility of our proposed methodology. Index Terms—Grid cells, Navigation, Neuro inspired agents, Autonomous underwater vehicles Fig. 1. A modified BlueROV2 used for experiments I. INTRODUCTION In recent years, the interest in exploring our oceans has that strongly correlates with the animal position in space [5]. -
Position–Theta-Phase Model of Hippocampal Place Cell Activity Applied to Quantification of Running Speed Modulation of Firing Rate
Position–theta-phase model of hippocampal place cell activity applied to quantification of running speed modulation of firing rate Kathryn McClaina,b,1, David Tingleyb, David J. Heegera,c,1, and György Buzsákia,b,1 aCenter for Neural Science, New York University, New York, NY 10003; bNeuroscience Institute, New York University, New York, NY 10016; and cDepartment of Psychology, New York University, New York, NY 10003 Edited by Terrence J. Sejnowski, Salk Institute for Biological Studies, La Jolla, CA, and approved November 18, 2019 (received for review July 24, 2019) Spiking activity of place cells in the hippocampus encodes the Another challenge in understanding this system is the dynamic animal’s position as it moves through an environment. Within a interaction between the rate code and phase code. As these codes cell’s place field, both the firing rate and the phase of spiking in combine, different formats of information are conveyed simulta- the local theta oscillation contain spatial information. We propose a neously in place cell spiking. The interaction can produce unin- – position theta-phase (PTP) model that captures the simultaneous tuitive, although entirely predictable, results in traditional analyses expression of the firing-rate code and theta-phase code in place cell of place cell activity. These practical challenges have hindered the spiking. This model parametrically characterizes place fields to com- pare across cells, time, and conditions; generates realistic place cell effort to explain variability in hippocampal firing rates. A com- simulation data; and conceptualizes a framework for principled hy- putational tool is needed that accounts for the well-established pothesis testing to identify additional features of place cell activity. -
A Comparison of Two Navigational Aids for Hypertext Mark Alan Satterfield Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 1992 A comparison of two navigational aids for hypertext Mark Alan Satterfield Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Business and Corporate Communications Commons, and the English Language and Literature Commons Recommended Citation Satterfield, Mark Alan, "A comparison of two navigational aids for hypertext" (1992). Retrospective Theses and Dissertations. 14376. https://lib.dr.iastate.edu/rtd/14376 This Thesis is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. A Comparison of two navigational aids for h3q5ertext by Mark Alan Satterfield A Thesis Submitted to the Gradxiate Facultyin Partial Fulfillment ofthe Requirements for the Degree of MASTER OF ARTS Department: English Major; English (Business and Technical Communication) Signatureshave been redactedforprivacy Iowa State University Ames, Iowa 1992 Copyright © Mark Alan Satterfield, 1992. All rights reserved. u TABLE OF CONTENTS Page ACKNOWLEDGEMENTS AN INTRODUCTION TO USER DISORIENTATION AND NAVIGATION IN HYPERTEXT 1 Navigation Aids 3 Backtrack 3 History 4 Bookmarks 4 Guided tours 5 Indexes 6 Browsers 6 Graphic browsers 7 Table-of-contents browsers 8 Theory of Navigation 8 Schemas ^ 9 Cognitive maps 9 Schemas and maps in text navigation 10 Context 11 Schemas, cognitive maps, and context 12 Metaphors for navigation ' 13 Studies of Navigation Effectiveness 15 Paper vs. -
Beta Oscillations and Hippocampal Place Cell Learning During
Beta Oscillations and Hippocampal Place Cell Learning during Exploration of Novel Environments Stephen Grossberg1 1Department of Cognitive and Neural Systems Center for Adaptive Systems, and Center of Excellence for Learning in Education, Science and Technology Boston University 677 Beacon St Boston, Massachusetts 02215 [email protected] Telephone: 617-353-7858/7 Fax: 617-353-7755 http://www.cns.bu.edu/~steve July 29, 2008 Revised: November 24, 2008 CAS/CNS-TR-08-003 Hippocampus, in press Running head: Beta Oscillations during Hippocampal Place Cell Learning Corresponding author: Stephen Grossberg, [email protected] Keywords: grid cells, category learning, spatial navigation, adaptive resonance theory, entorhinal cortex 1 Abstract The functional role of synchronous oscillations in various brain processes has attracted a lot of experimental interest. Berke et al. (2008) reported beta oscillations during the learning of hippocampal place cell receptive fields in novel environments. Such place cell selectivity can develop within seconds to minutes, and can remain stable for months. Paradoxically, beta power was very low during the first lap of exploration, grew to full strength as a mouse traversed a lap for the second and third times, and became low again after the first two minutes of exploration. Beta oscillation power also correlated with the rate at which place cells became spatially selective, and not with theta oscillations. These beta oscillation properties are explained by a neural model of how place cell receptive fields may be learned and stably remembered as spatially selective categories due to feedback interactions between entorhinal cortex and hippocampus. This explanation allows the learning of place cell receptive fields to be understood as a variation of category learning processes that take place in many brain systems, and challenges hippocampal models in which beta oscillations and place cell stability cannot be explained. -
Emergence of Grid-Like Representations by Training
Published as a conference paper at ICLR 2018 EMERGENCE OF GRID-LIKE REPRESENTATIONS BY TRAINING RECURRENT NEURAL NETWORKS TO PERFORM SPATIAL LOCALIZATION Christopher J. Cueva,∗ Xue-Xin Wei∗ Columbia University New York, NY 10027, USA fccueva,[email protected] ABSTRACT Decades of research on the neural code underlying spatial navigation have re- vealed a diverse set of neural response properties. The Entorhinal Cortex (EC) of the mammalian brain contains a rich set of spatial correlates, including grid cells which encode space using tessellating patterns. However, the mechanisms and functional significance of these spatial representations remain largely mysterious. As a new way to understand these neural representations, we trained recurrent neural networks (RNNs) to perform navigation tasks in 2D arenas based on veloc- ity inputs. Surprisingly, we find that grid-like spatial response patterns emerge in trained networks, along with units that exhibit other spatial correlates, including border cells and band-like cells. All these different functional types of neurons have been observed experimentally. The order of the emergence of grid-like and border cells is also consistent with observations from developmental studies. To- gether, our results suggest that grid cells, border cells and others as observed in EC may be a natural solution for representing space efficiently given the predominant recurrent connections in the neural circuits. 1 INTRODUCTION Understanding the neural code in the brain has long been driven by studying feed-forward -
Models of Grid Cells and Theta Oscillations
BRIEF COMMUNICATIONS ARISING Models of grid cells and theta oscillations ARISING FROM M. M.Yartsev, M. P. Witter & N. Ulanovsky Nature 479, 103–107 (2011) Grid cells recorded in the medial entorhinal cortex (MEC) of freely and in putative velocity-controlled oscillatory inputs identified as inter- moving rodents show a markedly regular spatial firing pattern whose neurons within the septohippocampal circuit7. underlying mechanism has been the subject of intense interest. Yartsev et al.1 recorded the firing of grid cells from bats trained to Yartsev et al.1 report that the firing of grid cells in crawling bats does crawl within the recording environment, a behaviour that they per- not show theta rhythmicity ‘‘causally disproving a major class of form very slowly (a mean speed of 3.7 cm s21 versus 17.6 cm s21 in computational models’’ of grid cell firing that rely on oscillatory our rat data), often stopping entirely (supplementary figure 11 in interference2–7. However, their data may be consistent with these ref. 1). The authors found grid cells with very low firing rates (a mean models, with the apparent lack of theta rhythmicity reflecting slow peak rate of 0.56 Hz versus 5.14 Hz in our data) and little significant movement speeds and low firing rates. Thus, the conclusion of theta modulation. However, matching movement speed is important Yartsev et al. is not supported by their data. for comparisons involving theta. At low speeds movement-related In oscillatory interference models, path integration is performed by theta rhythmicity is strongly attenuated12 and the need for path velocity-dependent variation in the frequencies of theta-band oscilla- integration is reduced. -
Resonating Neurons Stabilize Heterogeneous Grid-Cell Networks
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.10.419200; this version posted December 11, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Resonating neurons stabilize heterogeneous grid-cell networks 2 3 Divyansh Mittal and Rishikesh Narayanan* 4 5 Cellular Neurophysiology Laboratory, Molecular Biophysics Unit, Indian Institute of 6 Science, Bangalore, India. 7 8 *Corresponding Author 9 10 Rishikesh Narayanan, Ph.D. 11 Molecular Biophysics Unit 12 Indian Institute of Science 13 Bangalore 560 012, India. 14 15 e-mail: [email protected] 16 Phone: +91-80-22933372 17 Fax: +91-80-23600535 18 Number of words: 250 (abstract), 120 (significance statement) 19 20 Abbreviated title: Resonating neurons stabilize heterogeneous networks 21 22 Keywords: grid cells, entorhinal cortex, continuous attractor network, resonance, 23 heterogeneities 24 25 Author contributions 26 D. M. and R. N. designed experiments; D. M. performed experiments and carried out data 27 analysis; D. M. and R. N. co-wrote the paper. 28 29 Competing financial interests 30 The authors declare no conflict of interest. 31 32 Acknowledgments 33 This work was supported by the Wellcome Trust-DBT India Alliance (Senior fellowship to 34 RN; IA/S/16/2/502727), Human Frontier Science Program (HFSP) Organization (RN), the 35 Department of Biotechnology through the DBT-IISc partnership program (RN), the Revati 36 and Satya Nadham Atluri Chair Professorship (RN), and the Ministry of Human Resource 37 Development (RN & DM). The authors thank Dr. Poonam Mishra, Dr. -
Models of Grid Cells and Theta Oscillations
Publisher: NPG; Journal: Nature: Nature; Article Type: BCA DOI: 10.1038/nature11276 Models of grid cells and theta oscillations ARISING FROM M. M.Yartsev, M. P. Witter & N. Ulanovsky Nature 479, 103–107 (2011) Grid cells recorded in the medial entorhinal cortex (MEC) of freely moving rodents show a strikingly regular spatial firing pattern whose underlying mechanism has been the subject of intense interest. Yartsev et al.1 report that the firing of grid cells in crawling bats does not show theta rhythmicity “causally disproving a major class of computational models” of grid cell firing that rely on oscillatory interference2–7. However, their data may be consistent with these models, with the apparent lack of theta rhythmicity reflecting slow movement speeds and low firing rates. Thus, Yartsev et al.’s conclusion is not supported by their data. In oscillatory interference models, path integration is performed by velocity- dependent variation in the frequencies of theta-band oscillations, which combine to generate the grid-cell pattern2–4,6,7. In addition, learned associations to environmental sensory inputs (possibly mediated by place cells) ensure that grids are spatially stable over time and are sufficient to maintain firing in familiar environments2,3,8. In rats, the majority of grid cells show theta-modulated firing9,10, and the model predicts specific relationships between modulation frequency, running velocity and grid scale4, which have been verified in grid cells11 and in putative velocity-controlled oscillatory inputs identified as interneurons within the septohippocampal circuit7. Yartsev et al.1 recorded the firing of grid cells from bats trained to crawl within the recording environment, a behaviour that they perform very slowly (a mean speed of 3.7 cm s−1 versus 17.6 cm s−1 in our rat data), often stopping entirely (supplementary figure 11 in ref. -
May-Britt Moser Norwegian University of Science and Technology (NTNU), Trondheim, Norway
Grid Cells, Place Cells and Memory Nobel Lecture, 7 December 2014 by May-Britt Moser Norwegian University of Science and Technology (NTNU), Trondheim, Norway. n 7 December 2014 I gave the most prestigious lecture I have given in O my life—the Nobel Prize Lecture in Medicine or Physiology. Afer lectures by my former mentor John O’Keefe and my close colleague of more than 30 years, Edvard Moser, the audience was still completely engaged, wonderful and responsive. I was so excited to walk out on the stage, and proud to present new and exciting data from our lab. Te title of my talk was: “Grid cells, place cells and memory.” Te long-term vision of my lab is to understand how higher cognitive func- tions are generated by neural activity. At frst glance, this seems like an over- ambitious goal. President Barack Obama expressed our current lack of knowl- edge about the workings of the brain when he announced the Brain Initiative last year. He said: “As humans, we can identify galaxies light years away; we can study particles smaller than an atom. But we still haven’t unlocked the mystery of the three pounds of matter that sits between our ears.” Will these mysteries remain secrets forever, or can we unlock them? What did Obama say when he was elected President? “Yes, we can!” To illustrate that the impossible is possible, I started my lecture by showing a movie with a cute mouse that struggled to bring a biscuit over an edge and home to its nest. Te biscuit was almost bigger than the mouse itself. -
Specific Changes in Hippocampal Spatial Codes Predict Spatial
Behavioural Brain Research 169 (2006) 168–175 Short communication Specific changes in hippocampal spatial codes predict spatial working memory performance Corey B. Puryear, Michael King, Sheri J.Y. Mizumori ∗ Department of Psychology, Box 351525, University of Washington, Seattle, WA 98195, United States Received 7 July 2005; received in revised form 8 October 2005; accepted 18 December 2005 Available online 2 February 2006 Abstract This study examined the relationship between hippocampal place fields and spatial working memory. Place cells were recorded while rats solved a spatial working memory task in light and dark testing conditions. Rats made significantly more errors when tested in darkness, and although place fields changed in multiple ways in darkness, only changes in place field specificity predicted the degree of impaired spatial memory. This finding suggests that more spatially distinct place fields may contribute to hippocampal-dependent mnemonic functions. © 2006 Elsevier B.V. All rights reserved. Keywords: Place cells; Place fields; Behavior; Spatial learning; Single units Hippocampal (HPC) damage in several animal species environment that caused place fields to be out of register rel- impairs the ability to learn tasks that depend on the use of ative to their standard configuration also resulted in a decrease allocentric spatial information [1,5,19]. Furthermore, numerous in rats’ performance on a continuous alternation task [10].In electrophysiological studies have demonstrated that the firing contrast, other manipulations that cause a robust reorganization rates of HPC pyramidal cells (place cells) are strongly modu- of place fields do not always affect rats’ performance of HPC- lated by the spatial location (place field) of the rat within the dependent spatial tasks [2,8]. -
Maps and Their Place in Mesopotamia, Egypt, Greece, and Rome
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