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This Article Appeared in a Journal Published by Elsevier. the Attached Copy Is Furnished to the Author for Internal Non-Commerci
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/authorsrights Author's personal copy Molecular Phylogenetics and Evolution 71 (2014) 149–156 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multi-locus molecular phylogeny for Australia’s iconic Jacky Dragon (Agamidae: Amphibolurus muricatus): Phylogeographic structure along the Great Dividing Range of south-eastern Australia ⇑ Mitzy Pepper a, , Marco D. Barquero b, Martin J. Whiting b, J. Scott Keogh a a Division of Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, Australia b Department of Biological Sciences, Macquarie University, Sydney, Australia article info abstract Article history: Jacky dragons (Amphibolurus muricatus) are ubiquitous in south-eastern Australia and were one of the Received 25 June 2013 -
Archived at the Flinders Academic Commons
Archived at the Flinders Academic Commons: http://dspace.flinders.edu.au/dspace/ This is the publisher’s version of an article published in The South Australian Naturalist. The original publication is available by subscription at: http://search.informit.com.au/ browseJournalTitle;res=IELHSS;issn=0038-2965 Please cite this article as: Smith AL, Bull CM and Driscoll DA (2013). Skeletochronological analysis of age in three “fire- specialist” lizard species. SA Naturalist 87, 6-17 Copyright (2013) the Field Naturalists Society of South Australia. Published version of the paper reproduced here with permission from the publisher. All rights reserved. Extract from The South Australian Naturalist 87(1): 6–17. SKELETOCHRONOLOGICAL ANALYSIS OF AGE IN THREE ‘FIRE-SPECIALIST’ LIZARD SPECIES Annabel L. Smith 1,2*, C. Michael Bull 2, Don A. Driscoll 1,2 1. ARC Centre of Excellence for Environmental Decisions and the NERP Environmental Decisions Hub, Fenner School of Environment and Society, Frank Fenner Building 141, Australian National University, Canberra ACT 0200, Australia. 2. School of Biological Sciences, Flinders University, GPO Box 2100, Adelaide SA 5001, Australia * Author for correspondence: Email: [email protected] Phone: +612 6125 9339, Fax: +612 6125 0757 ABSTRACT: Adverse fire regimes threaten the persistence of animals in many ecosystems. ‘Fire-specialist’ species, which specialise on a particular post-fire successional stage, are likely to be at greatest risk of decline under adverse fire regimes. Life history data on fire-specialists, including longevity, are needed to develop tools to assist fire management for conservation. We used skeletochronology to estimate the age of individuals of three South Australian fire-specialist lizard species: Amphibolurus norrisi (Agamidae), Ctenotus atlas (Scincidae) and Nephrurus stellatus (Gekkonidae). -
Biological Survey Part 2.Pdf
LEVEL 1 BIOLOGICAL ASSESSMENT OF RAVENSTHORPE GOLD PROJECT, WESTERN AUSTRALIA Page | 101 home ranges may overlap, there tends to be a smaller non-overlapping ‘core’ area defined by den locations. Core areas are approximately 4 km2 and 0.9 km2 for males and females, respectively (Serena & Soderquist, 1989). Females tend to be territorial, although some areas may be shared by a mother and her adult daughter (Serena & Soderquist, 1989). Male core areas are much larger and overlap broadly with other males as well as females. Both sexes occur at similar densities in the Jarrah forest. Home range size may be smaller in areas where foxes are effectively controlled, and where Chuditch population densities are higher (DEC, 2012b; Mathew, 1996). Chuditch are opportunistic feeders, foraging primarily on the ground at night. In the forest, insects and other large invertebrates comprise the bulk of their diet, though some mammals, birds and lizards are also included (DEC, 2012b; Serena et al., 1991). The Chuditch is primarily a nocturnal species, they may be diurnally active during the breeding season (April to July) or when cold, wet weather restricts nocturnal foraging (DEC, 2012b). The average life span of an established adult is two years, and wild Chuditch generally don’t live past four years (Soderquist, 1988). Factors contributing to Chuditch mortality include: ▪ Motor vehicle strike (Chuditch commonly forage along dirt roads and tracks making them more susceptible to this); ▪ Illegal shooting near roads; ▪ Predation by foxes, raptors and feral cats; ▪ Injury in rabbit traps; and ▪ Natural accidents and disease. The Chuditch has been recorded on camera within the Project Area during the two fauna surveys conducted by APM in 2016 and 2017. -
WALKUP-DISSERTATION-2018.Pdf
IDENTIFYING DISRUPTIONS OF POPULATION PROCESSES IN FRAGMENTED LANDSCAPES FOR AN ENDEMIC HABITAT SPECIALIST, THE DUNES SAGEBRUSH LIZARD (Sceloporus arenicolus) A Dissertation by DANIELLE KATHRYN WALKUP Submitted to the Office of Graduate and Professional Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Chair of Committee, Lee A. Fitzgerald Co-Chair of Committee, Toby J. Hibbitts Committee Members, Masami Fujiwara Jay Walton Wade A. Ryberg Head of Department, David Caldwell December 2018 Major Subject: Wildlife and Fisheries Sciences Copyright 2018 Danielle K. Walkup ABSTRACT Habitat fragmentation and habitat loss are two of the main drivers of biodiversity loss. This anthropogenic reduction of habitat and the corresponding increasing isolation can lead to negative consequences for biodiversity including species loss, changes in community composition, and reduced species diversity at multiple levels of organization. Understanding how a species is distributed across the landscape is especially important in conservation contexts, as variations in habitat quality can drive population persistence. My dissertation focused on Sceloporus arenicolus (dunes sagebrush lizard) a habitat specialist endemic to the Mescalero Monahans Sandhills ecosystem threatened by loss and degradation of shinnery oak dunes. Extensive development of well-pad and road networks has led to fragmentation of shinnery oak dunes, negatively impacting S. arenciolus populations. I utilized data from three different studies to elucidate responses of S. arenicolus populations in highly fragmented areas, understanding how S. arenicolus use and move through habitat, and finally estimating occupancy probabilities across part of its Texas range. To understand how populations of S. arenicolus and other dune-dwelling lizards in the community were impacted by landscape fragmentation, we captured lizards on 27 independent trapping grids located in unfragmented (N=18) and fragmented (N=9) sites in southeastern New Mexico from 2009 to 2013. -
Fire and Fragmentation Interactions: Effects on Reptiles and Small Mammals in Modified Semi-Arid Landscapes
Fire and fragmentation interactions: effects on reptiles and small mammals in modified semi-arid landscapes Moloch horridus – juvenile Thorny Devil Juliana Lazzari Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy of the Australian National University October 2019 Declaration This thesis is my own work, except where otherwise acknowledged (see Preface and Acknowledgements). Juliana Lazzari October 2019 iii PREFACE This thesis consists of four connected papers that present research I undertook for my doctoral program (Papers I-IV). The papers are framed by a brief Context Statement and Synthesis that explain the relationships between the papers and place my thesis in a broader ecological setting. One paper has been published (Paper II) and the remaining papers (Papers I, III and IV) have been prepared for publication, but not yet submitted. The papers were written to stand alone and for this reason there is some unavoidable repetition between them, for example in the background information and the description of study areas. References have been provided at the end of each paper, and a complete reference list is provided in the Consolidated Thesis References section at the end of this document. I designed my research agenda in consultation with my supervisor, Don Driscoll, to ensure my project targeted specific fire and fragmentation interaction research within the framework of a broader project on the fire ecology of plants, birds and reptiles. The overarching study was funded predominantly by an Australian Research Council grant to Don Driscoll. I performed the majority of the work for the papers that form this thesis, including developing research questions and experimental designs, conducting the field work for data collection and organised teams of volunteers to assist me. -
A Phylogeny and Revised Classification of Squamata, Including 4161 Species of Lizards and Snakes
BMC Evolutionary Biology This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes BMC Evolutionary Biology 2013, 13:93 doi:10.1186/1471-2148-13-93 Robert Alexander Pyron ([email protected]) Frank T Burbrink ([email protected]) John J Wiens ([email protected]) ISSN 1471-2148 Article type Research article Submission date 30 January 2013 Acceptance date 19 March 2013 Publication date 29 April 2013 Article URL http://www.biomedcentral.com/1471-2148/13/93 Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). Articles in BMC journals are listed in PubMed and archived at PubMed Central. For information about publishing your research in BMC journals or any BioMed Central journal, go to http://www.biomedcentral.com/info/authors/ © 2013 Pyron et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes Robert Alexander Pyron 1* * Corresponding author Email: [email protected] Frank T Burbrink 2,3 Email: [email protected] John J Wiens 4 Email: [email protected] 1 Department of Biological Sciences, The George Washington University, 2023 G St. -
NSW REPTILE KEEPERS' LICENCE Species Lists 1006
NSW REPTILE KEEPERS’ LICENCE SPECIES LISTS (2006) The taxonomy in this list follows that used in Wilson, S. and Swan, G. A Complete Guide to Reptiles of Australia, Reed 2003. Common names generally follow the same text, when common names were used, or have otherwise been lifted from other publications. As well as reading this species list, you will also need to read the “NSW Reptile Keepers’ Licence Information Sheet 2006.” That document has important information about the different types of reptile keeper licenses. It also lists the criteria you need to demonstrate before applying to upgrade to a higher class of licence. THESE REPTILES CAN ONLY BE HELD UNDER A REPTILE KEEPERS’ LICENCE OF CLASS 1 OR HIGHER Code Scientific Name Common Name Code Scientific Name Common Name Turtles Monitors E2018 Chelodina canni Cann’s Snake-necked Turtle G2263 Varanus acanthurus Spiney-tailed Monitor C2017 Chelodina longicollis Snake-necked Turtle Q2268 Varanus gilleni Pygmy Mulga Monitor G2019 Chelodina oblonga Oblong Turtle G2271 Varanus gouldii Sand Monitor Y2028 Elseya dentata Northern Snapping Turtle M2282 Varanus tristis Black-Headed Monitor K2029 Elseya latisternum Saw-shelled Turtle Y2776 Elusor macrurus Mary River Turtle E2034 Emydura macquarii Murray Short-necked Turtle Skinks T2031 Emydura macquarii dharra Macleay River Turtle A2464 Acritoscincus platynotum Red-throated Skink T2039 Emydura macquarii dharuk Sydney Basin Turtle W2331 Cryptoblepharus virgatus Cream-striped Wall Skink T2002 Emydura macquarii emmotti Emmott’s Short-necked Turtle W2375 -
A LIST of the VERTEBRATES of SOUTH AUSTRALIA
A LIST of the VERTEBRATES of SOUTH AUSTRALIA updates. for Edition 4th Editors See A.C. Robinson K.D. Casperson Biological Survey and Research Heritage and Biodiversity Division Department for Environment and Heritage, South Australia M.N. Hutchinson South Australian Museum Department of Transport, Urban Planning and the Arts, South Australia 2000 i EDITORS A.C. Robinson & K.D. Casperson, Biological Survey and Research, Biological Survey and Research, Heritage and Biodiversity Division, Department for Environment and Heritage. G.P.O. Box 1047, Adelaide, SA, 5001 M.N. Hutchinson, Curator of Reptiles and Amphibians South Australian Museum, Department of Transport, Urban Planning and the Arts. GPO Box 234, Adelaide, SA 5001updates. for CARTOGRAPHY AND DESIGN Biological Survey & Research, Heritage and Biodiversity Division, Department for Environment and Heritage Edition Department for Environment and Heritage 2000 4thISBN 0 7308 5890 1 First Edition (edited by H.J. Aslin) published 1985 Second Edition (edited by C.H.S. Watts) published 1990 Third Edition (edited bySee A.C. Robinson, M.N. Hutchinson, and K.D. Casperson) published 2000 Cover Photograph: Clockwise:- Western Pygmy Possum, Cercartetus concinnus (Photo A. Robinson), Smooth Knob-tailed Gecko, Nephrurus levis (Photo A. Robinson), Painted Frog, Neobatrachus pictus (Photo A. Robinson), Desert Goby, Chlamydogobius eremius (Photo N. Armstrong),Osprey, Pandion haliaetus (Photo A. Robinson) ii _______________________________________________________________________________________ CONTENTS -
This Article Appeared in a Journal Published by Elsevier. the Attached Copy Is Furnished to the Author for Internal Non-Commerci
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/authorsrights Author's personal copy Molecular Phylogenetics and Evolution 71 (2014) 149–156 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multi-locus molecular phylogeny for Australia’s iconic Jacky Dragon (Agamidae: Amphibolurus muricatus): Phylogeographic structure along the Great Dividing Range of south-eastern Australia ⇑ Mitzy Pepper a, , Marco D. Barquero b, Martin J. Whiting b, J. Scott Keogh a a Division of Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, Australia b Department of Biological Sciences, Macquarie University, Sydney, Australia article info abstract Article history: Jacky dragons (Amphibolurus muricatus) are ubiquitous in south-eastern Australia and were one of the Received 25 June 2013 -
Species Richness in Time and Space: a Phylogenetic and Geographic Perspective
Species Richness in Time and Space: a Phylogenetic and Geographic Perspective by Pascal Olivier Title A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Ecology and Evolutionary Biology) in The University of Michigan 2018 Doctoral Committee: Assistant Professor and Assistant Curator Daniel Rabosky, Chair Associate Professor Johannes Foufopoulos Professor L. Lacey Knowles Assistant Professor Stephen A. Smith Pascal O Title [email protected] ORCID iD: 0000-0002-6316-0736 c Pascal O Title 2018 DEDICATION To Judge Julius Title, for always encouraging me to be inquisitive. ii ACKNOWLEDGEMENTS The research presented in this dissertation has been supported by a number of research grants from the University of Michigan and from academic societies. I thank the Society of Systematic Biologists, the Society for the Study of Evolution, and the Herpetologists League for supporting my work. I am also extremely grateful to the Rackham Graduate School, the University of Michigan Museum of Zoology C.F. Walker and Hinsdale scholarships, as well as to the Department of Ecology and Evolutionary Biology Block grants, for generously providing support throughout my PhD. Much of this research was also made possible by a Rackham Predoctoral Fellowship, and by a fellowship from the Michigan Institute for Computational Discovery and Engineering. First and foremost, I would like to thank my advisor, Dr. Dan Rabosky, for taking me on as one of his first graduate students. I have learned a tremendous amount under his guidance, and conducting research with him has been both exhilarating and inspiring. I am also grateful for his friendship and company, both in Ann Arbor and especially in the field, which have produced experiences that I will never forget. -
Biodiversity Summary: Eyre Peninsula, South Australia
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Shape of Western Australian Dragon Lizards (Agamidae)
Amphibia-Reptilia 26 (2005): 73-85 Shape of Western Australian dragon lizards (Agamidae) Graham G. Thompson1, Philip C. Withers2 Abstract. For 41 species of Western Australian agamid lizards, we found that most appendage lengths vary isometrically, so shape is largely independent of size. Of the three methods we used to quantitatively remove the effects of size on shape, the two that use principal component analysis (PCA; Jolicoeur, 1963; Somers, 1986; 1989) provided similar results, whereas regression residuals (against body length) provided a different interpretation. Somers’ size-free PCA approach to remove the size-effects was the most useful because it provided ‘size-free’ scores for each species that were further analysed using other techniques, and its results seemed more biologically meaningful. Some, but not all, of the variation in size-free shape for these lizards could be related to phylogeny, retreat choice and performance traits. Introduction that ratios should not be used for a variety of reasons. Many authors have used residuals of The obvious differences in head and limb di- morphological characteristics regressed against mensions (shape) among species of Western a body dimension (e.g. snout-to-vent length) to Australian (WA) dragon lizards (Agamidae; remove the effects of size before assessing the subsequently referred as dragons) are probably relationship between ‘size-free’ shape and habi- related to performance traits, behaviour and pre- tat use (e.g. Malhotra and Thorpe, 1997; Van- ferred habitat (Losos, 1990; Garland and Losos, hooydonck and Van Damme, 1999; Herrel et 1994; Miles, 1994; Malhotra and Thorpe, 1997; al., 2001, 2002; Kohlsdorf et al., 2001).