Limits on the Bathymetric Distribution of Keratose Sponges: a Field Test in Deep Water
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Naturally Prefabricated Marine Biomaterials: Isolation and Applications of Flat Chitinous 3D Scaffolds from Ianthella Labyrinthus (Demospongiae: Verongiida)
International Journal of Molecular Sciences Article Naturally Prefabricated Marine Biomaterials: Isolation and Applications of Flat Chitinous 3D Scaffolds from Ianthella labyrinthus (Demospongiae: Verongiida) Mario Schubert 1, Björn Binnewerg 1, Alona Voronkina 2 , Lyubov Muzychka 3, Marcin Wysokowski 4,5 , Iaroslav Petrenko 5, Valentine Kovalchuk 6, Mikhail Tsurkan 7 , Rajko Martinovic 8 , Nicole Bechmann 9 , Viatcheslav N. Ivanenko 10 , Andriy Fursov 5, Oleg B. Smolii 3, Jane Fromont 11 , Yvonne Joseph 5 , Stefan R. Bornstein 12,13, Marco Giovine 14, Dirk Erpenbeck 15 , Kaomei Guan 1,* and Hermann Ehrlich 5,* 1 Institute of Pharmacology and Toxicology, Technische Universität Dresden, 01307 Dresden, Germany; [email protected] (M.S.); [email protected] (B.B.) 2 Department of Pharmacy, National Pirogov Memorial Medical University, Vinnytsya, 21018 Vinnytsia, Ukraine; [email protected] 3 V.P Kukhar Institute of Bioorganic Chemistry and Petrochemistry, National Academy of Science of Ukraine, Murmanska Str. 1, 02094 Kyiv, Ukraine; [email protected] (L.M.); [email protected] (O.B.S.) 4 Faculty of Chemical Technology, Institute of Chemical Technology and Engineering, Poznan University of Technology, Berdychowo 4, 60-965 Poznan, Poland; [email protected] 5 Institute of Electronics and Sensor Materials, TU Bergakademie Freiberg, Gustav-Zeuner str. 3, 09599 Freiberg, Germany; [email protected] (I.P.); [email protected] (A.F.); [email protected] (Y.J.) 6 Department of Microbiology, -
2020 Annual Report
EMBRC: 2020 annual report Marine biodiversity is becoming an increasing concern with climate change and marine pollution, and, as a result, is of high relevance in the forthcoming UN Decade of the Ocean and Europe’s Green Deal. One of EMBRC’s principal activities is the provision of access to marine biodiversity, in all its forms. EMBRC Operators include some of the oldest marine institutes in the world and operate long-term observations, host biodiversity monitoring activities, and conduct research. In order to provide holistic information on biodiversity composition at these sites, EMBRC will establish EMO BON, a coordinated European Marine Omics Biodiversity Observation Network across its partners. This will constitute a new approach for EMBRC, and a step in a new direction, toward data generation and long-term observation. EMO BON presents an important need for the EMBRC user community and the opportunity to start filling the void in biological observation that we currently face in regard to physical and chemical observation. This is also an exciting opportunity to generate data for the marine microbiome studies currently in progress, and support Atlantic strategies, such as the Atlantic Ocean Research Alliance (AORA). Knowledge-based management of our blue planet is only possible by unified global monitoring using comparable data, which, in the case of biodiversity, cannot currently be assessed by remote sensing. In this context, EMBRC wishes to contribute to the global coordination of marine biodiversity by –omics approaches, integrating forthcoming technologies as appropriate. We aim to reach and interact with other relevant initiatives, offering the advantages of a sustainable RI that can support active research and underpin the development and optimisation of new methods. -
Exploring the Microbiome of the Mediterranean Sponge Aplysina Aerophoba by Single-Cell and Metagenomics
Exploring the microbiome of the Mediterranean sponge Aplysina aerophoba by single-cell and metagenomics Untersuchungen am Mikrobiom des Mittelmeerschwamms Aplysina aerophoba mittels Einzelzell- und Metagenomik Doctoral thesis for a doctoral degree at the Graduate School of Life Sciences Julius-Maximilians-Universität Würzburg Section: Integrative Biology Submitted by Beate Magdalena Slaby from München Würzburg, March 2017 Submitted on: ……………………………………………………… Members of the Promotionskomitee Chairperson: Prof. Dr. Thomas Müller Primary Supervisor: Prof. Dr. Ute Hentschel Humeida Supervisor (Second): Prof. Dr. Thomas Dandekar Supervisor (Third): Prof. Dr. Frédéric Partensky Date of public defense: ……………………………………………………… Date of receipt of certificates: ……………………………………………………… ii Affidavit I hereby confirm that my thesis entitled ‘Exploring the microbiome of the Mediterranean sponge Aplysina aerophoba by single-cell and metagenomics’ is the result of my own work. I did not receive any help or support from commercial consultants. All sources and / or materials applied are listed and specified in the thesis. Furthermore, I confirm that this thesis has not yet been submitted as part of another examination process neither in identical nor in similar form. Place, Date Signature iii Acknowledgements I received financial support for this thesis project by a grant of the German Excellence Initiative to the Graduate School of Life Sciences of the University of Würzburg through a PhD fellowship, and from the SponGES project that has received funding from the European Union’s Horizon 2020 research and innovation program. I would like to thank: Dr. Ute Hentschel Humeida for her support and encouragement, and for providing so many extraordinary opportunities. Dr. Thomas Dandekar and Dr. Frédéric Partensky for the supervision and a number of very helpful discussions. -
Sistema Arrecifal
PROGRAMA DE MANEJO México l Parque Nacional Sistema Arrecifal Veracruzano es uno de los parques nacionales con características marinas más reconocidas en México por su ubicación, estructura, resiliencia y biodiversidad, está integrado por las islas de Enmedio, Santiaguillo, Verde, Sacricios y Salmedina; al menos 45 arrecifes coralinos, de los que algunos presentan lagunas arrecifales con pastos marinos, así como playas y bajos. Se ubican en la porción interna de la plataforma continental en el Golfo de México y se elevan desde profundidades cercanas a los 40 metros. El Programa de Manejo es el instrumento rector de planeación y regulación que establece las actividades, acciones y lineamientos básicos para el manejo y administración del área en el corto, mediano y largo plazo. En este sentido, establece las acciones que permiten asegurar el equilibrio y la continuidad de los procesos ecológicos, salvaguardar la diversidad genética de las especies, el aprovechamiento racional de los recursos y proporcionar un campo propicio para la investigación cientíca y el estudio del ecosistema, permitiendo integrar la conservación de la riqueza natural con el bienestar social y el Parque Nacional desarrollo económico. Parque Nacional Sistema Arrecifal Veracruzano El Programa de Manejo del Parque Nacional Sistema Arrecifal Veracruzano tiene la importante misión de proteger la diversidad del Área Natural Protegida, mantener el acervo Sistema Arrecifal genético natural y fomentar el desarrollo sustentable de los recursos renovables presentes, permitiendo el disfrute de los servicios ambientales y de esparcimiento que presta a los usuarios. Es por ello que en su proceso de elaboración se realizaron reuniones de discusión y consenso con los involucrados en el manejo y uso del área considerando las Veracruzano necesidades de todos los sectores implicados, con base en los lineamientos legales establecidos y la argumentación técnica de soporte. -
Title the SYLLIDAE (POLYCHAETOUS ANNELIDS
THE SYLLIDAE (POLYCHAETOUS ANNELIDS) FROM Title JAPAN (VI) -DISTRIBUTION AND LITERATURE- Author(s) Imajima, Minoru PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1967), 14(5): 351-368 Issue Date 1967-01-25 URL http://hdl.handle.net/2433/175453 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University THE SYLLIDAE (POLYCHAETOUS ANNELIDS) FROM JAPAN (VI)* DISTRIBUTION AND LITERATURE MINORU IMAJIMA National Science Museum, Japan With 4 MaPs and 4 Tables Distribution of Syllidae in the Uraga Strait at the entrance to Tokyo Bay Tokyo Bay is situated on the Pacific coast of the central part of the Japanese main island, Honshu. The bay is embraced by two peninsulas, the Miura Peninsula on the west, and the Boso Peninsula on the east. It is connected with the open ocean at the mouth of Sagami Bay by a narrow strip of water, the Uraga Strait. A submerged gorge, known as the Tokyo Submarine Canyon, cuts the shelf deeply in the strait. However the canyon does not reach the main basin of Tokyo Bay and terminates rather abruptly midway in the strait, where it becomes narrower and shallower (330-100 m). The water in the Uraga Strait is much influenced by the coastal water of Tokyo Bay (HoRIKOSHI, 1962). Surveys were made by Dr. M. HORIKOSHI, of the Ocean Research Institute, University of Tokyo to provide information on the benthonic communities of Tokyo Bay. 127 stations were taken in this area. The bottom samples obtained by dredg ing were washed in a sieve of 1 rom standard mesh and then classified into several animal groups. -
The Comparative Embryology of Sponges Alexander V
The Comparative Embryology of Sponges Alexander V. Ereskovsky The Comparative Embryology of Sponges Alexander V. Ereskovsky Department of Embryology Biological Faculty Saint-Petersburg State University Saint-Petersburg Russia [email protected] Originally published in Russian by Saint-Petersburg University Press ISBN 978-90-481-8574-0 e-ISBN 978-90-481-8575-7 DOI 10.1007/978-90-481-8575-7 Springer Dordrecht Heidelberg London New York Library of Congress Control Number: 2010922450 © Springer Science+Business Media B.V. 2010 No part of this work may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, microfilming, recording or otherwise, without written permission from the Publisher, with the exception of any material supplied specifically for the purpose of being entered and executed on a computer system, for exclusive use by the purchaser of the work. Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Preface It is generally assumed that sponges (phylum Porifera) are the most basal metazoans (Kobayashi et al. 1993; Li et al. 1998; Mehl et al. 1998; Kim et al. 1999; Philippe et al. 2009). In this connection sponges are of a great interest for EvoDevo biolo- gists. None of the problems of early evolution of multicellular animals and recon- struction of a natural system of their main phylogenetic clades can be discussed without considering the sponges. These animals possess the extremely low level of tissues organization, and demonstrate extremely low level of processes of gameto- genesis, embryogenesis, and metamorphosis. They show also various ways of advancement of these basic mechanisms that allow us to understand processes of establishment of the latter in the early Metazoan evolution. -
STATE of BIODIVERSITY in the MEDITERRANEAN (2-3 P
UNEP(DEC)/MED WG.231/18 17 April 2003 ENGLISH MEDITERRANEAN ACTION PLAN Meeting of the MED POL National Coordinators Sangemini, Italy, 27 - 30 May 2003 STRATEGIC ACTION PROGRAMME GUIDELINES DEVELOPMENT OF ECOLOGICAL STATUS AND STRESS REDUCTION INDICATORS FOR THE MEDITERRANEAN REGION In cooperation with UNEP Athens, 2003 TABLE OF CONTENTS Pages 1. INTRODUCTION ......................................................................................................... 1 2. AIMS OF THE REPORT .............................................................................................. 2 3. STATE OF BIODIVERSITY IN THE MEDITERRANEAN............................................. 2 Species Diversity................................................................................................................. 2 Ecosystems/Communities .................................................................................................. 3 Pelagic ............................................................................................................................... 3 Benthic ............................................................................................................................... 4 4. ECOSYSTEM CHANGES DUE TO ANTHROPOGENIC IMPACT............................... 6 Microbial contamination...................................................................................................... 6 Industrial pollution .............................................................................................................. 6 Oil -
Sarda Et Al 2002
Micronesica 34(2):165-175, 2002 An association between a syllid polychaete, Haplosyllis basticola n. sp., and the sponge Ianthella basta RAFAEL SARDÁ, CONXITA AVILA Centre d’Estudis Avançats de Blanes (CSIC). Camí de Santa Bàrbara, s/n. 17300-Blanes, Girona (Spain) AND VALERIE J. PAUL Marine Laboratory UOG. University of Guam. Mangilao, Guam 96923. USA Abstract—The association between a syllid polychaete and the marine sponge Ianthella basta (Pallas, 1776) is described from the island of Guam (Micronesia). The polychaete is a new species of Haplosyllis Langerhans, 1879, named H. basticola. The new species was observed infesting in extraordinary high numbers the inside of the sponge canals and mesenchyme without any specially built tube-like structure. The closest species to H. basticola is H. anthogorgicola Utinomi, 1956 but they clearly differ in size, morphology of the simple setae and the annu- lations of the dorsal cirri. Haplosyllis basticola, n. sp. is characterized by a maximum of 25 setigers, dorsal cirri of the anterior 1st to 4th setigers clearly annulated averaging 10, 3, 3, and 4 annulations respectively, and the presence of only one simple seta by parapodia with a large subter- minal tooth and two smaller terminal teeth. A size frequency histogram of the population showed a unimodal distribution, which could be an indication of a continuous reproductive effort. The presence of female and male reproductive stolons gave us the opportunity to describe them. The chemical analysis of worm and sponge extracts and a Nuclear Magnetic Resonance Spectroscopy analysis done on H. basticola failed to confirm the presence of bastadins in the worm. -
Title the SYLLIDAE (POLYCHAETOUS ANNELIDS) from JAPAN
THE SYLLIDAE (POLYCHAETOUS ANNELIDS) FROM Title JAPAN (VI) -DISTRIBUTION AND LITERATURE- Author(s) Imajima, Minoru PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1967), 14(5): 351-368 Issue Date 1967-01-25 URL http://hdl.handle.net/2433/175453 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University THE SYLLIDAE (POLYCHAETOUS ANNELIDS) FROM JAPAN (VI)* DISTRIBUTION AND LITERATURE MINORU IMAJIMA National Science Museum, Japan With 4 MaPs and 4 Tables Distribution of Syllidae in the Uraga Strait at the entrance to Tokyo Bay Tokyo Bay is situated on the Pacific coast of the central part of the Japanese main island, Honshu. The bay is embraced by two peninsulas, the Miura Peninsula on the west, and the Boso Peninsula on the east. It is connected with the open ocean at the mouth of Sagami Bay by a narrow strip of water, the Uraga Strait. A submerged gorge, known as the Tokyo Submarine Canyon, cuts the shelf deeply in the strait. However the canyon does not reach the main basin of Tokyo Bay and terminates rather abruptly midway in the strait, where it becomes narrower and shallower (330-100 m). The water in the Uraga Strait is much influenced by the coastal water of Tokyo Bay (HoRIKOSHI, 1962). Surveys were made by Dr. M. HORIKOSHI, of the Ocean Research Institute, University of Tokyo to provide information on the benthonic communities of Tokyo Bay. 127 stations were taken in this area. The bottom samples obtained by dredg ing were washed in a sieve of 1 rom standard mesh and then classified into several animal groups. -
OEB51: the Biology and Evolu on of Invertebrate Animals
OEB51: The Biology and Evoluon of Invertebrate Animals Lectures: BioLabs 2062 Labs: BioLabs 5088 Instructor: Cassandra Extavour BioLabs 4103 (un:l Feb. 11) BioLabs2087 (aer Feb. 11) 617 496 1935 [email protected] Teaching Assistant: Tauana Cunha MCZ Labs 5th Floor [email protected] Basic Info about OEB 51 • Lecture Structure: • Tuesdays 1-2:30 Pm: • ≈ 1 hour lecture • ≈ 30 minutes “Tech Talk” • the lecturer will explain some of the key techniques used in the primary literature paper we will be discussing that week • Wednesdays: • By the end of lab (6pm), submit at least one quesBon(s) for discussion of the primary literature paper for that week • Thursdays 1-2:30 Pm: • ≈ 1 hour lecture • ≈ 30 minutes Paper discussion • Either the lecturer or teams of 2 students will lead the class in a discussion of the primary literature paper for that week • There Will be a total of 7 Paper discussions led by students • On Thursday January 28, We Will have the list of Papers to be discussed, and teams can sign uP to Present Basic Info about OEB 51 • Bocas del Toro, Panama Field Trip: • Saturday March 12 to Sunday March 20, 2016: • This field triP takes Place during sPring break! • It is mandatory to aend the field triP but… • …OEB51 Will not meet during the Week folloWing the field triP • Saturday March 12: • fly to Panama City, stay there overnight • Sunday March 13: • fly to Bocas del Toro, head out for our first collec:on! • Monday March 14 – Saturday March 19: • breakfast, field collec:ng (lunch on the boat), animal care at sea tables, -
Benthic Invertebrate Species Richness & Diversity At
BBEENNTTHHIICC INVVEERTTEEBBRRAATTEE SPPEECCIIEESSRRIICCHHNNEESSSS && DDIIVVEERRSSIITTYYAATT DIIFFFFEERRENNTTHHAABBIITTAATTSS IINN TTHHEEGGRREEAATEERR CCHHAARRLLOOTTTTEE HAARRBBOORRSSYYSSTTEEMM Charlotte Harbor National Estuary Program 1926 Victoria Avenue Fort Myers, Florida 33901 March 2007 Mote Marine Laboratory Technical Report No. 1169 The Charlotte Harbor National Estuary Program is a partnership of citizens, elected officials, resource managers and commercial and recreational resource users working to improve the water quality and ecological integrity of the greater Charlotte Harbor watershed. A cooperative decision-making process is used within the program to address diverse resource management concerns in the 4,400 square mile study area. Many of these partners also financially support the Program, which, in turn, affords the Program opportunities to fund projects such as this. The entities that have financially supported the program include the following: U.S. Environmental Protection Agency Southwest Florida Water Management District South Florida Water Management District Florida Department of Environmental Protection Florida Coastal Zone Management Program Peace River/Manasota Regional Water Supply Authority Polk, Sarasota, Manatee, Lee, Charlotte, DeSoto and Hardee Counties Cities of Sanibel, Cape Coral, Fort Myers, Punta Gorda, North Port, Venice and Fort Myers Beach and the Southwest Florida Regional Planning Council. ACKNOWLEDGMENTS This document was prepared with support from the Charlotte Harbor National Estuary Program with supplemental support from Mote Marine Laboratory. The project was conducted through the Benthic Ecology Program of Mote's Center for Coastal Ecology. Mote staff project participants included: Principal Investigator James K. Culter; Field Biologists and Invertebrate Taxonomists, Jay R. Leverone, Debi Ingrao, Anamari Boyes, Bernadette Hohmann and Lucas Jennings; Data Management, Jay Sprinkel and Janet Gannon; Sediment Analysis, Jon Perry and Ari Nissanka. -
Bioactive Bromotyrosine Derivatives from The
Bioactive Bromotyrosine Derivatives from the Pacific Marine Sponge Suberea clavata (Pulitzer-Finali, 1982) Ali Al-Mourabit, Damien Lacroix, Sylvain Petek, Amr El-Demerdash, Rozenn Trepos, Tinihauarii Mareva Leu, Cristina Florean, Marc Diederich, Claire Hellio, Cécile Debitus, et al. To cite this version: Ali Al-Mourabit, Damien Lacroix, Sylvain Petek, Amr El-Demerdash, Rozenn Trepos, et al.. Bioactive Bromotyrosine Derivatives from the Pacific Marine Sponge Suberea clavata (Pulitzer-Finali, 1982). Marine drugs, MDPI, 2021, 19 (3), pp.143. 10.3390/md19030143. hal-03319162 HAL Id: hal-03319162 https://hal.archives-ouvertes.fr/hal-03319162 Submitted on 12 Aug 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License marine drugs Article Bioactive Bromotyrosine Derivatives from the Pacific Marine Sponge Suberea clavata (Pulitzer-Finali, 1982) Céline Moriou 1, Damien Lacroix 1, Sylvain Petek 2,* , Amr El-Demerdash 1 , Rozenn Trepos 2 , Tinihauarii Mareva Leu 3, Cristina Florean 4, Marc