Aphyosemion Australe
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Coping with Life on Land: Physiological, Biochemical, and Structural Mechanisms to Enhance Function in Amphibious Fishes
Coping with Life on Land: Physiological, Biochemical, and Structural Mechanisms to Enhance Function in Amphibious Fishes by Andy Joseph Turko A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Andy Joseph Turko, October 2018 ABSTRACT COPING WITH LIFE ON LAND: PHYSIOLOGICAL, BIOCHEMICAL, AND STRUCTURAL MECHANISMS TO ENHANCE FUNCTION IN AMPHIBIOUS FISHES Andy Joseph Turko Advisor: University of Guelph, 2018 Dr. Patricia A. Wright The invasion of land by fishes was one of the most dramatic transitions in the evolutionary history of vertebrates. In this thesis, I investigated how amphibious fishes cope with increased effective gravity and the inability to feed while out of water. In response to increased body weight on land (7 d), the gill skeleton of Kryptolebias marmoratus became stiffer, and I found increased abundance of many proteins typically associated with bone and cartilage growth in mammals. Conversely, there was no change in gill stiffness in the primitive ray-finned fish Polypterus senegalus after one week out of water, but after eight months the arches were significantly shorter and smaller. A similar pattern of gill reduction occurred during the tetrapod invasion of land, and my results suggest that genetic assimilation of gill plasticity could be an underlying mechanism. I also found proliferation of a gill inter-lamellar cell mass in P. senegalus out of water (7 d) that resembled gill remodelling in several other fishes, suggesting this may be an ancestral actinopterygian trait. Next, I tested the function of a calcified sheath that I discovered surrounding the gill filaments of >100 species of killifishes and some other percomorphs. -
01 Astyanax Final Version.Indd
Vertebrate Zoology 59 (1) 2009 31 31 – 40 © Museum für Tierkunde Dresden, ISSN 1864-5755, 29.05.2009 Osteology of the African annual killifi sh genus Callopanchax (Teleostei: Cyprinodontiformes: Nothobranchiidae) and phylogenetic implications WILSON J. E. M. COSTA Laboratório de Ictiologia Geral e Aplicada, Departamento de Zoologia, Universidade Federal do Rio de Janeiro, Caixa Postal 68049, CEP 21944-970, Rio de Janeiro, Brazil E-mail: wcosta(at)acd.ufrj.br Received on May 5, 2008, accepted on October 6, 2008. Published online at www.vertebrate-zoology.de on May 15, 2009. > Abstract Osteological structures of Callopanchax are fi rst described and illustrated. Twenty-six characters derived from comparisons of osseous structures among some aplocheiloid fi shes provided evidence supporting hypotheses of relationships among three western African genera (Callopanchax, Scriptaphyosemion and Archiaphyosemion), as proposed in recent molecular analysis. The clade comprising Callopanchax, Scriptaphyosemion and Archiaphyosemion is supported by a laterally displaced antero-proximal process of the fourth ceratobranchial. The sister group relationship between Callopanchax and Scriptaphyosemion is supported by a constriction on the posterior portion of the parasphenoid, an anterior expansion of the hyomandibula, a rectangular basihyal cartilage, an anterior pointed process on the fi rst vertebra, and a long ventrally directed hemal prezygapophysis on the preural centrum 2. Monophyly of Callopanchax is supported by a convexity on the dorsal margin of the opercle, a long interarcual cartilage, and long neural prezygapophyses on the anterior caudal vertebrae. > Key words Killifi shes, Callopanchax, Africa, Osteology, Annual fi shes. Introduction COSTA, 1998a, 2004) and among genera and species of the Rivulidae (e. g., COSTA, 1998b, 2005, 2006a, b). -
Genome Composition Plasticity in Marine Organisms
Genome Composition Plasticity in Marine Organisms A Thesis submitted to University of Naples “Federico II”, Naples, Italy for the degree of DOCTOR OF PHYLOSOPHY in “Applied Biology” XXVIII cycle by Andrea Tarallo March, 2016 1 University of Naples “Federico II”, Naples, Italy Research Doctorate in Applied Biology XXVIII cycle The research activities described in this Thesis were performed at the Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Naples, Italy and at the Fishery Research Laboratory, Kyushu University, Fukuoka, Japan from April 2013 to March 2016. Supervisor Dr. Giuseppe D’Onofrio Tutor Doctoral Coordinator Prof. Claudio Agnisola Prof. Ezio Ricca Candidate Andrea Tarallo Examination pannel Prof. Maria Moreno, Università del Sannio Prof. Roberto De Philippis, Università di Firenze Prof. Mariorosario Masullo, Università degli Studi Parthenope 2 LIST OF PUBLICATIONS 1. On the genome base composition of teleosts: the effect of environment and lifestyle A Tarallo, C Angelini, R Sanges, M Yagi, C Agnisola, G D’Onofrio BMC Genomics 17 (173) 2016 2. Length and GC Content Variability of Introns among Teleostean Genomes in the Light of the Metabolic Rate Hypothesis A Chaurasia, A Tarallo, L Bernà, M Yagi, C Agnisola, G D’Onofrio PloS one 9 (8), e103889 2014 3. The shifting and the transition mode of vertebrate genome evolution in the light of the metabolic rate hypothesis: a review L Bernà, A Chaurasia, A Tarallo, C Agnisola, G D'Onofrio Advances in Zoology Research 5, 65-93 2013 4. An evolutionary acquired functional domain confers neuronal fate specification properties to the Dbx1 transcription factor S Karaz, M Courgeon, H Lepetit, E Bruno, R Pannone, A Tarallo, F Thouzé, P Kerner, M Vervoort, F Causeret, A Pierani and G D’Onofrio EvoDevo, Submitted 5. -
PAT Dec 2019
PAT December, 2019; 15 (2): 38-48 ISSN: 0794-5213 Online copy available at www.patnsukjournal.net/currentissue Publication of Nasarawa State University, Keffi The Ornamental Fish Fauna Assemblage in the Upper Reaches of New Calabar River in Rivers State, Nigeria. Ibim, A. T*. and Gogo, O. O. Department of Fisheries, Faculty of Agriculture, University of Port Harcourt, Email: [email protected] Abstract A thirteen week investigation was conducted to document the ornamental fish assemblage of the upper reaches of New Calabar River, Rivers State. Four sample stations along the river’s course were selected. Landed fish species were collected from local fishers. Fish composition and abundance was estimated by standard methods. Results of composition revealed forty one (41) species belonging to thirty five (35) genera, in twenty five (25) families. Family composition revealed among the twenty five (25) ornamental families, the Cichlidae was most dominant with nine (9) species from five (5) genera. Species composition revealed Malapterurus electricus (Malapterurudae) as most dominant species. Species richness was highest at Station D (3.95), slightly lower in Stations B (2.91) and C (2.60), and least in Station A (1.84). Family relative abundance revealed Cichlidae (20.16%) as the most abundant family, followed by Malapterurudae (9.91%), Alestidae (8.81%), and few others. However, several families recorded low abundance, with Mastacemblidae the least (0.04%). Species abundance also, revealed Malapterurus electricus as most abundant (9.99%), followed by Erpetocheithys calabaricus (7.78%), Brycinus longipinnis (7.35%), before Tilapia zilli (7.22%), and Aethiomastacemblus nigromarginatus the least abundant (0.02%). -
Three New Endemic Aphyosemion Species (Cyprinodontiformes: Nothobranchiidae) from the Massif Du Chaillu in the Upper Louessé River System, Republic of the Congo
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/321875026 Three new endemic Aphyosemion species (Cyprinodontiformes: Nothobranchiidae) from the Massif du Chaillu in the upper Louessé River system, Republic of the Congo Article in Zootaxa · January 2018 DOI: 10.11646/zootaxa.4369.1.3 CITATIONS READS 0 587 6 authors, including: Jouke van der Zee Gina Walsh Hogeschool Arnhem and Nijmegen Flora Fauna & Man Ecological Services Ltd. 18 PUBLICATIONS 29 CITATIONS 9 PUBLICATIONS 48 CITATIONS SEE PROFILE SEE PROFILE Valdie Nina Boukaka Mikembi Michiel Nell Jonker Institut National Recherche en Sciences Exactes et Naturelle Biotech Innovation Research Development & Consulting 5 PUBLICATIONS 0 CITATIONS 6 PUBLICATIONS 0 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Effects of microplastics and pharmaceuticals on trophic interactions View project Functional Ecology of Afrotropical Streams in the Republic of Congo, west-central Africa View project All content following this page was uploaded by Gina Walsh on 17 September 2018. The user has requested enhancement of the downloaded file. Zootaxa 4369 (1): 063–092 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2018 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4369.1.3 http://zoobank.org/urn:lsid:zoobank.org:pub:946093ED-9309-4D85-A473-32566D631B19 Three new endemic Aphyosemion species (Cyprinodontiformes: Nothobranchiidae) from the Massif du Chaillu in the upper Louessé River system, Republic of the Congo JOUKE R. VAN DER ZEE1, GINA WALSH2,3,8, VALDIE N. -
27. Aplocheilidae Bleeker, 1860 = 27. Aplocheilidae
27. APLOCHEILIDAE Bleeker, 1860 Jouke R. VAN DER ZEE, Tonnie WOELTJES et Rudolf H. WILDEKAMP Les Aplocheilidae sont aisément identifiables par la position du pore supérieur du canal latéro-sensoriel préoperculaire assez éloigné de l’œil (fig. 26.2B, 27.1) alors qu’il en est très proche chez les Poeciliidae (fig. 26.2A), ainsi que par la position basse des nageoires pectorales (fig. 26.2B). Les Aplocheilidae sont très riches en espèces, particulière- ment en basse Guinée. Ils sont morphologiquement assez homogènes et leur séparation en espèces peut être extrêmement difficile. Cependant, la famille montre une nette propension aux réarrangements caryologiques spécifiques aux clades, ceux-ci étant fréquemment accompagnés d’un patron de coloration spécifique aux mâles. Le patron de coloration des flancs et des nageoires impaires joue probablement un rôle dans la reconnaissance spécifique. C’est pourquoi, les clés de détermination insisteront sur l’importance du patron de coloration mâle comme caractère distinctif. L’identification des femelles et des juvéniles doit en grande partie se baser sur les mâles associés. Remarques : les poissons attribués ici à la famille Aplocheilidae ont une histoire taxonomique complexe. SCHEEL (1968) les a placés dans la sous-famille Rivulinae qui, à cette époque, était un mélange d’espèces africaines et néotropicales. Les Rivulinae étaient alors une sous-famille des Cyprinodontidae dans l’Ordre des Atheriniformes. Sur la base de caractères ostéologiques et cladistiques, PARENTI (1981) a exclu les Cyprinodontidae des Atheriniformes et les a élevés au rang d’ordre (Cyprinodontiformes). Les Rivulinae (sensu SCHEEL, 1968) sont divisés en deux familles, les Rivulidae incluant les genres du Nouveau Monde et les Aplocheilidae pour les genres de l’Ancien Monde. -
Non-Marine Mammals of Togo (West Africa): an Annotated Checklist
Non-marine mammals of Togo (West Africa): an annotated checklist Giovanni AMORI CNR – Institute of Ecosystem Studies, Viale dell’Università, 32, 00185 Rome (Italy) [email protected] Gabriel Hoinsoude SEGNIAGBETO Département de Zoologie et de Biologie animale, Université de Lomé, Faculté des Sciences, BP 6057 Lomé (Togo) [email protected] Jan DECHER Zoologisches Forschungsmuseum Alexander Koenig, Leibniz Institute for Animal Biodiversity, Adenauerallee 160, 53113 Bonn (Germany) [email protected] Delagnon ASSOU Département de Zoologie et de Biologie animale, Université de Lomé, Faculté des Sciences, BP 6057 Lomé (Togo) Spartaco GIPPOLITI Società Italiana per la Storia della Fauna “G. Altobello”, Viale Liegi 48, 00198 Rome (Italy) Luca LUISELLI Centre of Environmental Studies Demetra, and Niger Delta Ecology, and Biodiversity Conservation Unit, Department of Applied and Environmental Biology, Rivers State University of Science and Technology, PMB 5080, Port Harcourt, Rivers State (Nigeria) Published on 24 June 2016 urn:lsid:zoobank.org:pub:059171D0-809D-47F5-9030-669522C36E69 Amori G., Segniagbeto G. H., Decher J., Assou D., Gippoliti S. & Luiselli L. 2016. — Non-marine mammals of Togo (West Africa): an annotated checklist. Zoosystema 38 (2): 201-244. http://dx.doi.org/10.5252/z2016n2a3 ABSTRACT Although Togo is a relatively small country in West Africa, it is characterized by a wide variation of vegetation zones ranging from moist forests to arid savannahs, including the “Dahomey Gap”. Th ere has been no comprehensive documentation of the native mammal fauna of Togo since 1893. Our review of the extant and extirpated mammals of Togo includes 178 species, with Chiroptera (52 species) and KEY WORDS Rodentia (47 species) being the most speciose groups. -
Bio 220 Course Title:-Fisheries and Wildlife
NATIONAL OPEN UNIVERSITY OF NIGERIA SCHOOL OF SCIENCE AND TECHNOLOGY COURSE CODE:-BIO 220 COURSE TITLE:-FISHERIES AND WILDLIFE BIO 220 COURSE GUIDE COURSE GUIDE BIO 220 FISHERIES AND WILDLIFE Course Writers/Developers Dr. A.A. Alarape and Sololu A.O. Dept. of Wildlife and Fisheries University of Ibadan Ibadan, Nigeria Programme Leader Professor A. Adebanjo National Open University of Nigeria Course Coordinator Dr. N.E. Mundi National Open University of Nigeria NATIONAL OPEN UNIVERSITY OF NIGERIA ii BIO 220 COURSE GUIDE National Open University of Nigeria Headquarters 14/16 Ahmadu Bello Way Victoria Island Lagos Abuja office No. 5 Dar es Salaam Street Off Aminu Kano Crescent Wuse II, Abuja Nigeria e-mail: [email protected] URL: www.nou.edu.ng Published by National Open University of Nigeria Printed 2009 ISBN: 978-058-055-7 All Rights Reserved iii BIO 220 COURSE GUIDE CONTENTS PAGE Introduction…………………………………….……….……. 1 The Course…………………………………………………….. 1 Course Aims…………………………………………………… 1 Course Objectives……………………………………………… 2 Working through this Course…………………...……………… 3 Course Materials……………………………….……………….. 3 Study Units………………………………….………………….. 4 Textbooks and References……………………..………………. 5 Assessment…………...………………………………………… 5 Tutor-Marked Assignment …………………………………….. 5 Final Examination and Grading…………….………………….. 6 Course Overview………………………….……………………. 6 How to Get the Most of this Course ……………………………. 7 Facilitators/Tutors and Tutorials………………………………… 9 Summary ………………………………………………………… 9 iv Introduction Aquaculture has been identified as the panacea to the increasing demand for food fish all over the world. The case about Nigeria is not different in terms of the aquaculture industry leading to proliferation of fish farms across the country which is mostly self-subsistence with few having hatchery facilities. The wildlife aspect gives short descriptions of some of our most important wild animal species which include mammals, birds, and reptiles. -
The Evolution of Chorionic Ultrastructure, Delayed Hatching, and Desiccation Tolerance in Annual Killifishes
The Evolution of Chorionic Ultrastructure, Delayed Hatching, and Desiccation Tolerance in Annual Killifishes. by Andrew William Thompson B.S. in Biology, December 2009, Clarion University of Pennsylvania A Dissertation submitted to The Faculty of The Columbian College of Arts and Sciences of The George Washington University in partial fulfillment of the requirements for the degree of Doctor of Philosophy January 31, 2017 Guillermo Ortí Louis Weintraub Professor of Biological Sciences The Columbian College of Arts and Sciences of The George Washington University certifies that Andrew William Thompson has passed the Final Examination for the degree of Doctor of Philosophy as of August 1, 2016. This is the final and approved form of the dissertation. The Evolution of Chorionic Ultrastructure, Delayed Hatching, and Desiccation Tolerance in Annual Killifishes. Andrew William Thompson Dissertation Research Committee: Guillermo Ortí, Louis Weintraub Professor of Biological Sciences, Dissertation Director. Jason E. Podrabsky, Professor and Chair, Department of Biology, Portland State University, Committee Member. Jeremy Goecks, Assistant Professor of Computational Biology, Committee Member. ii Copyright 2016 by Andrew William Thompson All rights reserved iii Dedication To Jacqueline for being my compass needle towards adventure and my infinite source of strength. To Rian for being my partner in crime. To Mom for encouraging me to always dream bigger. To Dad for showing me that nature is beautiful. To Grandma for our trips to the creek. To Pap for his faith in me. To Uncle Jeff for showing me the honor in hard work. To Aunt Pam for teaching me that science is cool. To Uncle Michael for always finding me when I am away from home. -
Geo-Data: the World Geographical Encyclopedia
Geodata.book Page iv Tuesday, October 15, 2002 8:25 AM GEO-DATA: THE WORLD GEOGRAPHICAL ENCYCLOPEDIA Project Editor Imaging and Multimedia Manufacturing John F. McCoy Randy Bassett, Christine O'Bryan, Barbara J. Nekita McKee Yarrow Editorial Mary Rose Bonk, Pamela A. Dear, Rachel J. Project Design Kain, Lynn U. Koch, Michael D. Lesniak, Nancy Cindy Baldwin, Tracey Rowens Matuszak, Michael T. Reade © 2002 by Gale. Gale is an imprint of The Gale For permission to use material from this prod- Since this page cannot legibly accommodate Group, Inc., a division of Thomson Learning, uct, submit your request via Web at http:// all copyright notices, the acknowledgements Inc. www.gale-edit.com/permissions, or you may constitute an extension of this copyright download our Permissions Request form and notice. Gale and Design™ and Thomson Learning™ submit your request by fax or mail to: are trademarks used herein under license. While every effort has been made to ensure Permissions Department the reliability of the information presented in For more information contact The Gale Group, Inc. this publication, The Gale Group, Inc. does The Gale Group, Inc. 27500 Drake Rd. not guarantee the accuracy of the data con- 27500 Drake Rd. Farmington Hills, MI 48331–3535 tained herein. The Gale Group, Inc. accepts no Farmington Hills, MI 48331–3535 Permissions Hotline: payment for listing; and inclusion in the pub- Or you can visit our Internet site at 248–699–8006 or 800–877–4253; ext. 8006 lication of any organization, agency, institu- http://www.gale.com Fax: 248–699–8074 or 800–762–4058 tion, publication, service, or individual does not imply endorsement of the editors or pub- ALL RIGHTS RESERVED Cover photographs reproduced by permission No part of this work covered by the copyright lisher. -
International Journal of Agriculture and Biosciences P-ISSN: 2305-6622 E-ISSN: 2306-3599 [email protected]
International Journal of Agriculture and Biosciences www.ijagbio.com P-ISSN: 2305-6622 E-ISSN: 2306-3599 [email protected] RESEARCH ARTICLE Identification of the Fish Fauna of Agulu Lake, Agulu, Anambra State Ukpaka Chukwujekwu G1 and Akunne Chidi2 1Biological Sciences Department, Anambra State University, Uli; Anambra, Nigeria 2Department of Zoology, Nnamdi Azikiwe University, Awka, Anambra, Nigeria ARTICLE INFO ABSTRACT The recording and identification of the fish fauna of Agulu Lake, was carried Received: June 12, 2013 out between January and June, 1990. Eight families and fourteen species were Revised: August 16, 2013 identified: Mormyridae-Mormyrus rume; Characidae-Alestes nurse and Accepted: September 14, 2013 Hepsetus odoe; Bagridae-Chrysichthys coriscanus and Chrysichthys furcatus; Key words: Schilbeidae-Schilbe mystus; Claridae-Clarias albopunctatus; Cyprinodontidae- Agulu Lake Epiplatys sexfasciatus and Epiplatys bifasciatus; Cichlidae-Tilapia zillii, Fish fauna Tilapia mariae, Pelmatochromis guentheri and Hemichromis fasciatus; and Identification Channidae-Channa obscura. These fish species were caught more in site A than in any other site in the lake, followed by site G, which represents the main body of the lake. The diagnostic characters indicate that these fish species *Corresponding Address: belong to the same population as their counterparts in other parts of the Niger- Ukpaka Chukwujekwu G Benue ichthyofaunal zone. The results were discussed in the light of fish fauna [email protected] components and their ecology in African lakes. Cite This Article as: Chukwujekwu GU and A Chidi, 2013. Identification of the fish fauna of Agulu Lake, Agulu, Anambra State. Inter J Agri Biosci, 2(5): 248-251. www.ijagbio.com INTRODUCTION fishes, not only of Nigeria, but also of West Africa.