Toxic Golden Algae (Prymnesium Parvum)
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28-Protistsf20r.Ppt [Compatibility Mode]
9/3/20 Ch 28: The Protists (a.k.a. Protoctists) (meet these in more detail in your book and lab) 1 Protists invent: eukaryotic cells size complexity Remember: 1°(primary) endosymbiosis? -> mitochondrion -> chloroplast genome unicellular -> multicellular 2 1 9/3/20 For chloroplasts 2° (secondary) happened (more complicated) {3°(tertiary) happened too} 3 4 Eukaryotic “supergroups” (SG; between K and P) 4 2 9/3/20 Protists invent sex: meiosis and fertilization -> 3 Life Cycles/Histories (Fig 13.6) Spores and some protists (Humans do this one) 5 “Algae” Group PS Pigments Euglenoids chl a & b (& carotenoids) Dinoflagellates chl a & c (usually) (& carotenoids) Diatoms chl a & c (& carotenoids) Xanthophytes chl a & c (& carotenoids) Chrysophytes chl a & c (& carotenoids) Coccolithophorids chl a & c (& carotenoids) Browns chl a & c (& carotenoids) Reds chl a, phycobilins (& carotenoids) Greens chl a & b (& carotenoids) (more groups exist) 6 3 9/3/20 Name word roots (indicate nutrition) “algae” (-phyt-) protozoa (no consistent word ending) “fungal-like” (-myc-) Ecological terms plankton phytoplankton zooplankton 7 SG: Excavata/Excavates “excavated” feeding groove some have reduced mitochondria (e.g.: mitosomes, hydrogenosomes) 8 4 9/3/20 SG: Excavata O: Diplomonads: †Giardia Cl: Parabasalids: Trichonympha (bk only) †Trichomonas P: Euglenophyta/zoa C: Kinetoplastids = trypanosomes/hemoflagellates: †Trypanosoma C: Euglenids: Euglena 9 SG: “SAR” clade: Clade Alveolates cell membrane 10 5 9/3/20 SG: “SAR” clade: Clade Alveolates P: Dinoflagellata/Pyrrophyta: -
Ecology of Oceanic Coccolithophores. I. Nutritional Preferences of the Two Stages in the Life Cycle of Coccolithus Braarudii and Calcidiscus Leptoporus
AQUATIC MICROBIAL ECOLOGY Vol. 44: 291–301, 2006 Published October 10 Aquat Microb Ecol Ecology of oceanic coccolithophores. I. Nutritional preferences of the two stages in the life cycle of Coccolithus braarudii and Calcidiscus leptoporus Aude Houdan, Ian Probert, Céline Zatylny, Benoît Véron*, Chantal Billard Laboratoire de Biologie et Biotechnologies Marines, Université de Caen Basse-Normandie, Esplanade de la Paix, 14032 Caen Cedex, France ABSTRACT: Coccolithus braarudii and Calcidiscus leptoporus are 2 coccolithophores (Prymnesio- phyceae: Haptophyta) known to possess a complex heteromorphic life cycle, with alternation between a motile holococcolith-bearing haploid stage and a non-motile heterococcolith-bearing diploid stage. The ecological implications of this type of life cycle in coccolithophores are currently poorly known. The nutritional preferences of each stage of both species, and their growth response to conditions of turbulence were investigated by varying their growth conditions. Of the different cul- ture media tested, only the synthetic seawater medium did not support the growth of both stages of C. braarudii and C. leptoporus. With natural seawater-based media, the growth rate of the haploid phase of both coccolithophores was stimulated by the addition of soil extract (K/2: 0.23 ± 0.02 d–1 and K/2 with soil extract 0.35 ± 0.01 d–1 for the C. braarudii haploid stage), while the diploid phase was not, indicating that the motile stage is capable of utilizing compounds present in soil extract or ingest- ing bacteria that are activated in enriched media. The addition of sodium acetate to the medium also stimulated the haploid phase of C. -
University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
Harmful Algae 91 (2020) 101587
Harmful Algae 91 (2020) 101587 Contents lists available at ScienceDirect Harmful Algae journal homepage: www.elsevier.com/locate/hal Review Progress and promise of omics for predicting the impacts of climate change T on harmful algal blooms Gwenn M.M. Hennona,c,*, Sonya T. Dyhrmana,b,* a Lamont-Doherty Earth Observatory, Columbia University, Palisades, NY, United States b Department of Earth and Environmental Sciences, Columbia University, New York, NY, United States c College of Fisheries and Ocean Sciences University of Alaska Fairbanks Fairbanks, AK, United States ARTICLE INFO ABSTRACT Keywords: Climate change is predicted to increase the severity and prevalence of harmful algal blooms (HABs). In the past Genomics twenty years, omics techniques such as genomics, transcriptomics, proteomics and metabolomics have trans- Transcriptomics formed that data landscape of many fields including the study of HABs. Advances in technology have facilitated Proteomics the creation of many publicly available omics datasets that are complementary and shed new light on the Metabolomics mechanisms of HAB formation and toxin production. Genomics have been used to reveal differences in toxicity Climate change and nutritional requirements, while transcriptomics and proteomics have been used to explore HAB species Phytoplankton Harmful algae responses to environmental stressors, and metabolomics can reveal mechanisms of allelopathy and toxicity. In Cyanobacteria this review, we explore how omics data may be leveraged to improve predictions of how climate change will impact HAB dynamics. We also highlight important gaps in our knowledge of HAB prediction, which include swimming behaviors, microbial interactions and evolution that can be addressed by future studies with omics tools. Lastly, we discuss approaches to incorporate current omics datasets into predictive numerical models that may enhance HAB prediction in a changing world. -
Biology and Systematics of Heterokont and Haptophyte Algae1
American Journal of Botany 91(10): 1508±1522. 2004. BIOLOGY AND SYSTEMATICS OF HETEROKONT AND HAPTOPHYTE ALGAE1 ROBERT A. ANDERSEN Bigelow Laboratory for Ocean Sciences, P.O. Box 475, West Boothbay Harbor, Maine 04575 USA In this paper, I review what is currently known of phylogenetic relationships of heterokont and haptophyte algae. Heterokont algae are a monophyletic group that is classi®ed into 17 classes and represents a diverse group of marine, freshwater, and terrestrial algae. Classes are distinguished by morphology, chloroplast pigments, ultrastructural features, and gene sequence data. Electron microscopy and molecular biology have contributed signi®cantly to our understanding of their evolutionary relationships, but even today class relationships are poorly understood. Haptophyte algae are a second monophyletic group that consists of two classes of predominately marine phytoplankton. The closest relatives of the haptophytes are currently unknown, but recent evidence indicates they may be part of a large assemblage (chromalveolates) that includes heterokont algae and other stramenopiles, alveolates, and cryptophytes. Heter- okont and haptophyte algae are important primary producers in aquatic habitats, and they are probably the primary carbon source for petroleum products (crude oil, natural gas). Key words: chromalveolate; chromist; chromophyte; ¯agella; phylogeny; stramenopile; tree of life. Heterokont algae are a monophyletic group that includes all (Phaeophyceae) by Linnaeus (1753), and shortly thereafter, photosynthetic organisms with tripartite tubular hairs on the microscopic chrysophytes (currently 5 Oikomonas, Anthophy- mature ¯agellum (discussed later; also see Wetherbee et al., sa) were described by MuÈller (1773, 1786). The history of 1988, for de®nitions of mature and immature ¯agella), as well heterokont algae was recently discussed in detail (Andersen, as some nonphotosynthetic relatives and some that have sec- 2004), and four distinct periods were identi®ed. -
Water Resources Report
MMINNEAPOLISINNEAPOLIS PPARKARK && RRECREATIONECREATION BBOARDOARD 20122012 WWATERATER RRESOURCESESOURCES RREPORTEPORT Environmental Stewardship Water Resources Management www.minneapolisparks.org January 2015 2012 WATER RESOURCES REPORT Prepared by: Minneapolis Park & Recreation Board Environmental Stewardship 3800 Bryant Avenue South Minneapolis, MN 55409-1029 612.230.6400 www.minneapolisparks.org January 2015 Funding provided by: Minneapolis Park & Recreation Board City of Minneapolis Public Works Copyright © 2015 by the Minneapolis Park & Recreation Board Material may be quoted with attribution. TABLE OF CONTENTS Page Abbreviations ............................................................................................................................. i Executive Summary ............................................................................................................... iv 1. Monitoring Program Overview .............................................................................................. 1-1 2. Birch Pond .............................................................................................................................. 2-1 3. Brownie Lake ......................................................................................................................... 3-1 4. Lake Calhoun ......................................................................................................................... 4-1 5. Cedar Lake ............................................................................................................................ -
CH28 PROTISTS.Pptx
9/29/14 Biosc 41 Announcements 9/29 Review: History of Life v Quick review followed by lecture quiz (history & v How long ago is Earth thought to have formed? phylogeny) v What is thought to have been the first genetic material? v Lecture: Protists v Are we tetrapods? v Lab: Protozoa (animal-like protists) v Most atmospheric oxygen comes from photosynthesis v Lab exam 1 is Wed! (does not cover today’s lab) § Since many of the first organisms were photosynthetic (i.e. cyanobacteria), a LOT of excess oxygen accumulated (O2 revolution) § Some organisms adapted to use it (aerobic respiration) Review: History of Life Review: Phylogeny v Which organelles are thought to have originated as v Homology is similarity due to shared ancestry endosymbionts? v Analogy is similarity due to convergent evolution v During what event did fossils resembling modern taxa suddenly appear en masse? v A valid clade is monophyletic, meaning it consists of the ancestor taxon and all its descendants v How many mass extinctions seem to have occurred during v A paraphyletic grouping consists of an ancestral species and Earth’s history? Describe one? some, but not all, of the descendants v When is adaptive radiation likely to occur? v A polyphyletic grouping includes distantly related species but does not include their most recent common ancestor v Maximum parsimony assumes the tree requiring the fewest evolutionary events is most likely Quiz 3 (History and Phylogeny) BIOSC 041 1. How long ago is Earth thought to have formed? 2. Why might many organisms have evolved to use aerobic respiration? PROTISTS! Reference: Chapter 28 3. -
Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting
NOTICE This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Department of Energy, nor any of their employees, nor any of their contractors, subcontractors, or their employees, makes any warranty, expressed or implied, or assumes any legai liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. Printed in the United States of America Available from: National Technical Information Service U.S. Departmenr of Commerce 5285 Port Royal Road Springfield, VA 221 61 Price: Microfiche A01 Printed Copy A1 6 Codes are ~sedfor pricing ail publications. The code is determined by the number of pages in the publication. lnformation pertaining to the pricing codes can be found in the current issue of the following publications, which are generally available in most tibraries; Energy Research Abstracts. (ERA); Government Reports Announcements and Index (GRA and I); Scientific and Technical Abstract Reports (STAR;; and publication. NTIS-PR-360 available from NT1S at the above address. SER IICP-231-2700 UC Category: 61c DE85Ol2137 Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting 20 - 21 March 1985 Golden, CO June 1985 Prepared under Task No. 4513.10 FTP No. 513 Solar Energy Research Institute A Division of Midwest Research Institute 1617 Cole Boulevard Golden, Colorado 80401 Prepared for the U.S. Department of Energy Contract No. DE-AC02-83CH10093 PREFACE This volume contains progress reports presented by the Aquatic Species Program subcontractors and SERl researchers at the SERl Aquatic Species Review held at SERI, March 20 and 2 1, 1985. -
A Brief Review
PEER-REVIEWED REVIEW ARTICLE bioresources.com Potential of the Micro and Macro Algae for Biofuel Production: A Brief Review Renganathan Rajkumar,* Zahira Yaakob, and Mohd Sobri Takriff The world seems to be raising its energy needs owing to an expanding population and people’s desire for higher living standards. Diversification biofuel sources have become an important energy issue in recent times. Among the various resources, algal biomass has received much attention in the recent years due to its relatively high growth rate, its vast potential to reduce greenhouse gas (GHG) emissions and climate change, and their ability to store high amounts of lipids and carbohydrates. These versatile organisms can also be used for the production of biofuel. In this review, sustainability and the viability of algae as an up-coming biofuel feedstock have been discussed. Additionally, this review offers an overview of the status of biofuel production through algal biomass and progress made so far in this area. Keywords: Microalgae; Macroalgae; Biomass; Lipid; Biofuel; Oil production; Bioconversion; Algaculture; Wastewater treatment; Malaysia Contact information: Department of Chemical and Process Engineering, Faculty of Engineering and Built Environment, University Kebangsaan Malaysia, 43600 UKM Bangi, Selangor Darul Ehsan, Malaysia; * Corresponding author: [email protected] INTRODUCTION The energy requirements of the global community are rising year by year. Currently, fossil fuels are a prominent source of transportation fuels and energy. The world’s demand for oil is expected to rise 60% from the current level by 2025 (Khan et al. 2009). In view of the increasing oil demand and the depleting oil reserves, development of innovative techniques for the production of biofuels from novel renewable biomass feedstock sources are gaining importance all over the world. -
And Macro-Algae: Utility for Industrial Applications
MICRO- AND MACRO-ALGAE: UTILITY FOR INDUSTRIAL APPLICATIONS Outputs from the EPOBIO project September 2007 Prepared by Anders S Carlsson, Jan B van Beilen, Ralf Möller and David Clayton Editor: Dianna Bowles cplpressScience Publishers EPOBIO: Realising the Economic Potential of Sustainable Resources - Bioproducts from Non-food Crops © September 2007, CNAP, University of York EPOBIO is supported by the European Commission under the Sixth RTD Framework Programme Specific Support Action SSPE-CT-2005-022681 together with the United States Department of Agriculture. Legal notice: Neither the University of York nor the European Commission nor any person acting on their behalf may be held responsible for the use to which information contained in this publication may be put, nor for any errors that may appear despite careful preparation and checking. The opinions expressed do not necessarily reflect the views of the University of York, nor the European Commission. Non-commercial reproduction is authorized, provided the source is acknowledged. Published by: CPL Press, Tall Gables, The Sydings, Speen, Newbury, Berks RG14 1RZ, UK Tel: +44 1635 292443 Fax: +44 1635 862131 Email: [email protected] Website: www.cplbookshop.com ISBN 13: 978-1-872691-29-9 Printed in the UK by Antony Rowe Ltd, Chippenham CONTENTS 1 INTRODUCTION 1 2 HABITATS AND PRODUCTION SYSTEMS 4 2.1 Definition of terms 4 2.2 Macro-algae 5 2.2.1 Habitats for red, green and brown macro-algae 5 2.2.2 Production systems 6 2.3 Micro-algae 9 2.3.1 Applications of micro-algae 9 2.3.2 Production -
Within-Arctic Horizontal Gene Transfer As a Driver of Convergent Evolution in Distantly Related 1 Microalgae 2 Richard G. Do
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.31.454568; this version posted August 2, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Within-Arctic horizontal gene transfer as a driver of convergent evolution in distantly related 2 microalgae 3 Richard G. Dorrell*+1,2, Alan Kuo3*, Zoltan Füssy4, Elisabeth Richardson5,6, Asaf Salamov3, Nikola 4 Zarevski,1,2,7 Nastasia J. Freyria8, Federico M. Ibarbalz1,2,9, Jerry Jenkins3,10, Juan Jose Pierella 5 Karlusich1,2, Andrei Stecca Steindorff3, Robyn E. Edgar8, Lori Handley10, Kathleen Lail3, Anna Lipzen3, 6 Vincent Lombard11, John McFarlane5, Charlotte Nef1,2, Anna M.G. Novák Vanclová1,2, Yi Peng3, Chris 7 Plott10, Marianne Potvin8, Fabio Rocha Jimenez Vieira1,2, Kerrie Barry3, Joel B. Dacks5, Colomban de 8 Vargas2,12, Bernard Henrissat11,13, Eric Pelletier2,14, Jeremy Schmutz3,10, Patrick Wincker2,14, Chris 9 Bowler1,2, Igor V. Grigoriev3,15, and Connie Lovejoy+8 10 11 1 Institut de Biologie de l'ENS (IBENS), Département de Biologie, École Normale Supérieure, CNRS, 12 INSERM, Université PSL, 75005 Paris, France 13 2CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, 14 FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, 75016 Paris, France 15 3 US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, 1 16 Cyclotron Road, Berkeley, -
Effect of Different Salinities on Growth and Intra-And Extracellular Toxicity
Vol. 67: 139–149, 2012 AQUATIC MICROBIAL ECOLOGY Published online October 2 doi: 10.3354/ame01589 Aquat Microb Ecol Effect of different salinities on growth and intra- and extracellular toxicity of four strains of the haptophyte Prymnesium parvum Astrid Weissbach, Catherine Legrand* Centre for Ecology and Evolution in Microbial model Systems (EEMiS), School of Natural Sciences, Linnæus University, 39182 Kalmar, Sweden ABSTRACT: The present study investigates the effect of brackish (7 PSU) and marine (26 PSU) salinity on physiological parameters and intra- and extracellular toxicity in 4 strains of Prymne- sium parvum Carter. The different P. parvum strains were grown in batch cultures in 2 trials under different experimental conditions to test the development of intra- and extracellular toxicity dur- ing growth. The response of P. parvum toxicity to salinity was validated using 2 protocols. Intra- specific variations in growth rate, maximal cell density (yield) and cell morphology were con- trolled by salinity. Extracellular toxicity was higher at 7 PSU in all strains, but no correlation was found between intra- and extracellular toxicity. The variation of extracellular toxicity in response to salinity was much greater than that of intracellular toxicity, which indicates that P. parvum may be producing a variety of substances contributing to its various types of ‘toxicity’. KEY WORDS: Allelopathy · Extracellular toxicity · Harmful algal species · Intracellular toxicity · Prymnesium parvum · Salinity · Strain Resale or republication not permitted without written consent of the publisher INTRODUCTION Igarashi et al. (1996). It is not yet clear if the toxins stored intracellularly, causing mortality of P. parvum Prymnesium parvum Carter, the so-called ‘golden grazers due to ingestion (mechanism 2) (Tillmann algae’, is a harmful and toxic microalga, which causes 2003, Barreiro et al.