Targeting LEDGF/P75 to Sensitize Chemoresistant Prostate Cancer Cells to Taxanes Leslimar Rios-Colón

Total Page:16

File Type:pdf, Size:1020Kb

Targeting LEDGF/P75 to Sensitize Chemoresistant Prostate Cancer Cells to Taxanes Leslimar Rios-Colón Loma Linda University TheScholarsRepository@LLU: Digital Archive of Research, Scholarship & Creative Works Loma Linda University Electronic Theses, Dissertations & Projects 6-2017 Targeting LEDGF/p75 to Sensitize Chemoresistant Prostate Cancer Cells to Taxanes Leslimar Rios-Colón Follow this and additional works at: http://scholarsrepository.llu.edu/etd Part of the Medical Biochemistry Commons, Medical Pharmacology Commons, and the Oncology Commons Recommended Citation Rios-Colón, Leslimar, "Targeting LEDGF/p75 to Sensitize Chemoresistant Prostate Cancer Cells to Taxanes" (2017). Loma Linda University Electronic Theses, Dissertations & Projects. 459. http://scholarsrepository.llu.edu/etd/459 This Dissertation is brought to you for free and open access by TheScholarsRepository@LLU: Digital Archive of Research, Scholarship & Creative Works. It has been accepted for inclusion in Loma Linda University Electronic Theses, Dissertations & Projects by an authorized administrator of TheScholarsRepository@LLU: Digital Archive of Research, Scholarship & Creative Works. For more information, please contact [email protected]. LOMA LINDA UNIVERSITY School of Medicine in conjunction with the Faculty of Graduate Studies ____________________ Targeting LEDGF/p75 to Sensitize Chemoresistant Prostate Cancer Cells to Taxanes by Leslimar Ríos-Colón ____________________ A Dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Pharmacology ____________________ June 2017 © 2017 Leslimar Ríos-Colón All Rights Reserved Each person whose signature appears below certifies that this dissertation in his/her opinion is adequate, in scope and quality, as a dissertation for the degree Doctor of Philosophy. _______________________________________________________________________ John Buchholz, Professor of Pharmacology _______________________________________________________________________ Eileen Brantley, Assistant Professor of Pharmacology _______________________________________________________________________ Carlos A. Casiano, Professor of Microbiology and Molecular Genetics _______________________________________________________________________ Daisy De León, Professor of Physiology _______________________________________________________________________ Nouri Neamati, Professor of Medicinal Chemistry, The University of Michigan _______________________________________________________________________ Kimberly J. Payne, Associate Professor of Pathology and Human Anatomy _______________________________________________________________________ Lubo Zhang, Professor of Pharmacology iii ACKNOWLEDGEMENTS I am extremely grateful of my advisor Dr. Carlos A. Casiano, an exemplary scientist, who dedicated time and effort so that I could evolve from a student to a detailed-oriented researcher. I am thankful for your trust and guidance and for believing that not only I had the potential to obtain this degree, but that I can make an impact in this field. I am also thankful to all the past and current members of my laboratory. Especially I want to thank Christina K. Du Ross and Leanne Woods-Burnham, who have become my family. We have gone through so much together! I will always remember the singing, laughter, crying and the many scientific debates we had. I could not have asked for two better people to share this journey with. I am also thankful to Dr. Anamika Basu, who was an incredible source of knowledge not only for scientific topics, but also of how to manage life as a graduate student. I also want to thank Dr. Tino W. Sanchez for all the stimulating scientific conversations and knowledge provided. I also want to thank my two former summer students, Catherine Elix and Ivana Alicea Polanco. It was an honor to be able to help you navigate the complex world of research! I could not have been able to complete this without the love and support of my family. To my husband Edwin Pagán, who never let go of my hand through this path no matter how demanding it was. To my parents, Lester Ríos and Margarita Colón, who were my biggest supporters since the day I decided to travel many miles in order to achieve my dreams. To my dearest Adeline, you are my biggest accomplishment and the reason I want to improve everyday as a scientist and as a human being. iv I also want to acknowledge my undergraduate research mentor, Dr. Adriana Báez. I appreciate all the support and for always giving me advice. And finally, I would like to thank God who always has guided me through mysterious paths with his angels guiding the way. v CONTENT Approval Page .................................................................................................................... iii Acknowledgements ............................................................................................................ iv List of Figures .................................................................................................................... ix List of Tables ..................................................................................................................... xi List of Abbreviations ........................................................................................................ xii Abstract ............................................................................................................................ xvi Chapter 1. Introduction ..............................................................................................................1 Prostate Cancer and Available Therapies .........................................................1 Inflammation and Prostate Cancer .....................................................................6 The Lens Epithelium-Derived Growth Factor of 75kD .....................................6 LEDGF Structure and Function .........................................................................7 Cellular Protective and Survival Functions of LEDGF/p75 ............................13 Target Genes of LEDGF/p75 ...........................................................................14 Interacting Partners of LEDGF/p75 .................................................................16 Regulation of LEDGF/p75 Expression and Function .....................................17 Autoantibody Responses to LEDGF/p75 in Cancer and Inflammatory Conditions .........................................................................20 Role of LEDGF/p75 in Leukemia ....................................................................23 Overexpression and Role of LEDGF/p75 in Solid Tumors ............................26 LEDGF/p75 Promotes Chemoresistance in Cancer Cells ...............................28 Targeting LEDGF/p75 and its Potential in Combinatorial Therapy ................30 Repurposing HIV-Based LEDGF/p75 Inhibitors for Cancer Treatment ........34 Summary Highlights .......................................................................................37 Hypothesis and Purpose of Dissertation Work ................................................40 References ........................................................................................................41 2. Targeting the Stress Oncoproten LEDGF/p75 to sensitize Chemoresistance Prostate Cancer Cells to Taxanes ..............................................57 Abstract ............................................................................................................58 Introduction ......................................................................................................59 Results ..............................................................................................................61 vi LEDGF/p75 is Overexpressed in DTX-Resistant DU145 and PC3 Cells ...........................................................................................................61 DU145-DR and PC3-DR Cells are Resistant to Multiple Taxanes but not to TRAIL .......................................................................................66 LEDGF/p75 Depletion Sensitizes DTX-resistant PCa cells to Clinically Relevant Taxanes .....................................................................70 LEDGF/p75 Retains Structural Integrity During Taxane-Induced Cell Death but is Robustly Cleaved During TRAIL-Induced Apoptosis ...................................................................................................76 LEDGF/p75 Depletion Does Not Influence the Expression of the Multidrug Resistance Protein P-glycoprotein in DTX-Resistant PCa Cells ...................................................................................................81 Discussion ........................................................................................................83 Materials and Methods ....................................................................................91 Cell lines, Antibodies and Reagents .........................................................91 Viability Assays ........................................................................................92 Quantitative Real-time PCR ......................................................................92 Immunoblotting Procedures .......................................................................93 Indirect Immunofluorescence Microscopy ................................................94 RNA Interference-Mediated Knockdown of LEDGF/p75 in PCa cells ..........................................................................94 Clonogenic Assays .....................................................................................95
Recommended publications
  • Multiple Cellular Proteins Interact with LEDGF/P75 Through a Conserved Unstructured Consensus Motif
    ARTICLE Received 19 Jan 2015 | Accepted 1 Jul 2015 | Published 6 Aug 2015 DOI: 10.1038/ncomms8968 Multiple cellular proteins interact with LEDGF/p75 through a conserved unstructured consensus motif Petr Tesina1,2,3,*, Katerˇina Cˇerma´kova´4,*, Magdalena Horˇejsˇ´ı3, Katerˇina Procha´zkova´1, Milan Fa´bry3, Subhalakshmi Sharma4, Frauke Christ4, Jonas Demeulemeester4, Zeger Debyser4, Jan De Rijck4,**, Va´clav Veverka1,** & Pavlı´na Rˇeza´cˇova´1,3,** Lens epithelium-derived growth factor (LEDGF/p75) is an epigenetic reader and attractive therapeutic target involved in HIV integration and the development of mixed lineage leukaemia (MLL1) fusion-driven leukaemia. Besides HIV integrase and the MLL1-menin complex, LEDGF/p75 interacts with various cellular proteins via its integrase binding domain (IBD). Here we present structural characterization of IBD interactions with transcriptional repressor JPO2 and domesticated transposase PogZ, and show that the PogZ interaction is nearly identical to the interaction of LEDGF/p75 with MLL1. The interaction with the IBD is maintained by an intrinsically disordered IBD-binding motif (IBM) common to all known cellular partners of LEDGF/p75. In addition, based on IBM conservation, we identify and validate IWS1 as a novel LEDGF/p75 interaction partner. Our results also reveal how HIV integrase efficiently displaces cellular binding partners from LEDGF/p75. Finally, the similar binding modes of LEDGF/p75 interaction partners represent a new challenge for the development of selective interaction inhibitors. 1 Institute of Organic Chemistry and Biochemistry of the ASCR, v.v.i., Flemingovo nam. 2, 166 10 Prague, Czech Republic. 2 Department of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Vinicna 5, 128 44 Prague, Czech Republic.
    [Show full text]
  • Duplication 9P and Their Implication to Phenotype
    Guilherme et al. BMC Medical Genetics (2014) 15:142 DOI 10.1186/s12881-014-0142-1 RESEARCH ARTICLE Open Access Duplication 9p and their implication to phenotype Roberta Santos Guilherme1, Vera Ayres Meloni1, Ana Beatriz Alvarez Perez1, Ana Luiza Pilla1, Marco Antonio Paula de Ramos1, Anelisa Gollo Dantas1, Sylvia Satomi Takeno1, Leslie Domenici Kulikowski2 and Maria Isabel Melaragno1* Abstract Background: Trisomy 9p is one of the most common partial trisomies found in newborns. We report the clinical features and cytogenomic findings in five patients with different chromosome rearrangements resulting in complete 9p duplication, three of them involving 9p centromere alterations. Methods: The rearrangements in the patients were characterized by G-banding, SNP-array and fluorescent in situ hybridization (FISH) with different probes. Results: Two patients presented de novo dicentric chromosomes: der(9;15)t(9;15)(p11.2;p13) and der(9;21)t(9;21) (p13.1;p13.1). One patient presented two concomitant rearranged chromosomes: a der(12)t(9;12)(q21.13;p13.33) and an psu i(9)(p10) which showed FISH centromeric signal smaller than in the normal chromosome 9. Besides the duplication 9p24.3p13.1, array revealed a 7.3 Mb deletion in 9q13q21.13 in this patient. The break in the psu i(9) (p10) probably occurred in the centromere resulting in a smaller centromere and with part of the 9q translocated to the distal 12p with the deletion 9q occurring during this rearrangement. Two patients, brother and sister, present 9p duplication concomitant to 18p deletion due to an inherited der(18)t(9;18)(p11.2;p11.31)mat.
    [Show full text]
  • 1 Zinc-Finger Endonuclease Targeting PSIP-1 Inhibits HIV-1 Integration 1 2
    AAC Accepts, published online ahead of print on 12 May 2014 Antimicrob. Agents Chemother. doi:10.1128/AAC.02690-14 Copyright © 2014, American Society for Microbiology. All Rights Reserved. 1 Zinc-finger endonuclease targeting PSIP-1 inhibits HIV-1 integration 2 3 Roger Badia, Eduardo Pauls, Eva Riveira-Munoz, Bonaventura Clotet, José A. Esté* 4 and Ester Ballana 5 6 IrsiCaixa, Hospital Universitari Germans Trias i Pujol, Universitat Autònoma de 7 Barcelona, 08916 Badalona, Spain. 8 9 Running title: ZFN targeting PSIP1 inhibits HIV-1 integration 10 11 12 13 * Corresponding author mailing address: 14 José A. Esté 15 IrsiCaixa, Hospital Germans Trias i Pujol, C. Canyet s/n, 08916 Badalona, Spain 16 Phone: 34 934656374 17 FAX: 34 934653968 18 E-mail: [email protected] 19 20 Key words 21 Zinc finger endonuclease, Ledgf/p75, integrase, HIV-1 22 1 23 ABSTRACT 24 Genome editing using zinc-finger nucleases (ZFN) has been successfully 25 applied to disrupt CCR5 or CXCR4 host factors, inhibiting viral entry and infection. 26 Gene therapy using ZFN to modify PSIP1 gene, encoding for LEDGF protein, might 27 restrain an early step of viral replication cycle at the integration level. ZFNs targeting 28 the PSIP1 gene (ZFNLEDGF) were designed to specifically recognize the sequence after 29 the integrase binding domain (IBD) of LEDGF/p75 protein. ZFNLEDGF 30 successfully recognized the target region of the PSIP1 gene in TZM-bl cells by 31 heteroduplex formation and DNA sequence analysis. Gene editing induced a frame 32 shift of the coding region and resulted in the abolishment of LEDGF expression at 33 mRNA and protein level.
    [Show full text]
  • Association of Polymorphisms in the LEDGF/P75 Gene (PSIP1) with Susceptibility to HIV-1 Infection and Disease Progression
    Association of polymorphisms in the LEDGF/p75 gene (PSIP1) with susceptibility to HIV-1 infection and disease progression Paradise Madlalaa,b, Rik Gijsbersc, Frauke Christc, Anneleen Hombrouckc, Lise Wernerd, Koleka Mlisanad, Ping Ane, Salim S. Abdool Karimd, Cheryl A. Winklere, Zeger Debyserc and Thumbi Ndung’ua,d Objective: LEDGF/p75, encoded by the PSIP1 gene, interacts with HIV-1 integrase and targets HIV-1 integration into active genes. We investigated the influence of poly- morphisms in PSIP1 on HIV-1 acquisition and disease progression in black South Africans. Methods: Integrase binding domain of LEDGF/p75 was sequenced in 126 participants. Four haplotype tagging SNPs rs2277191, rs1033056, rs12339417 and rs10283923 referred to as SNP1, SNP2, SNP3 and SNP4, respectively, and one exonic SNP rs61744944 (SNP5, Q472L) were genotyped in 195 HIV-1 seronegative, 52 primary and 403 chronically infected individuals using TaqMan assays. LEDGF/p75 expression was quantified by real-time RT-PCR. The impact of Q472L mutation on the interaction with HIV_1 IN was measured by AlphaScreen. Results: rs2277191 (SNP1) A was more frequent among seropositives (P ¼ 0.06, Fish- er’s exact test). Among individuals followed longitudinally SNP1A trended towards association with higher likelihood of HIV-1 acquisition [relative hazard (RH) ¼ 2.21, P ¼ 0.08; Cox model] and it was also associated with rapid disease progression (RH ¼ 5.98, P ¼ 0.04; Cox model) in the recently infected (primary infection) cohort. rs12339417 (SNP3)C was associated with slower decline of CD4þ T cells (P ¼ 0.02) and lower messenger RNA (mRNA) levels of LEDGF/p75 (P < 0.01).
    [Show full text]
  • Twenty Years of Menin: Emerging Opportunities for Restoration of Transcriptional Regulation in MEN1
    2410 K M A Dreijerink et al. Molecular mechanism of MEN1 24:10 T135–T145 Thematic Review Twenty years of menin: emerging opportunities for restoration of transcriptional regulation in MEN1 Koen M A Dreijerink1, H T Marc Timmers2 and Myles Brown3 1 Department of Endocrinology, VU University Medical Center, Amsterdam, The Netherlands Correspondence 2 German Cancer Consortium (DKTK) partner site Freiburg, German Cancer Research Center (DKFZ) and Department should be addressed of Urology, Medical Center-University of Freiburg, Freiburg, Germany to M Brown 3 Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, USA Email [email protected] Abstract Since the discovery of the multiple endocrine neoplasia type 1 (MEN1) gene in 1997, Key Words elucidation of the molecular function of its protein product, menin, has been a challenge. f multiple endocrine Biochemical, proteomics, genetics and genomics approaches have identified various neoplasia type 1 (MEN1) potential roles, which converge on gene expression regulation. The most consistent f menin findings show that menin connects transcription factors and chromatin-modifying f transcriptional regulation enzymes, in particular, the histone H3K4 methyltransferase complexes MLL1 and MLL2. f histone H3K4 trimethylation Chromatin immunoprecipitation combined with next-generation sequencing has enabled studying genome-wide dynamics of chromatin binding by menin. We propose that menin regulates cell type-specific transcriptional programs by linking chromatin regulatory Endocrine-Related Cancer Endocrine-Related complexes to specific transcription factors. In this fashion, the MEN1 gene is a tumor suppressor gene in the endocrine tissues that are affected in MEN1. Recent studies have hinted at possibilities to pharmacologically restore the epigenetic changes caused by loss of menin function as therapeutic strategies for MEN1, for example, by inhibition of histone demethylases.
    [Show full text]
  • Integrative Genomic Characterization Identifies Molecular Subtypes of Lung Carcinoids
    Published OnlineFirst July 12, 2019; DOI: 10.1158/0008-5472.CAN-19-0214 Cancer Genome and Epigenome Research Integrative Genomic Characterization Identifies Molecular Subtypes of Lung Carcinoids Saurabh V. Laddha1, Edaise M. da Silva2, Kenneth Robzyk2, Brian R. Untch3, Hua Ke1, Natasha Rekhtman2, John T. Poirier4, William D. Travis2, Laura H. Tang2, and Chang S. Chan1,5 Abstract Lung carcinoids (LC) are rare and slow growing primary predominately found at peripheral and endobronchial lung, lung neuroendocrine tumors. We performed targeted exome respectively. The LC3 subtype was diagnosed at a younger age sequencing, mRNA sequencing, and DNA methylation array than LC1 and LC2 subtypes. IHC staining of two biomarkers, analysis on macro-dissected LCs. Recurrent mutations were ASCL1 and S100, sufficiently stratified the three subtypes. enriched for genes involved in covalent histone modification/ This molecular classification of LCs into three subtypes may chromatin remodeling (34.5%; MEN1, ARID1A, KMT2C, and facilitate understanding of their molecular mechanisms and KMT2A) as well as DNA repair (17.2%) pathways. Unsuper- improve diagnosis and clinical management. vised clustering and principle component analysis on gene expression and DNA methylation profiles showed three robust Significance: Integrative genomic analysis of lung carcinoids molecular subtypes (LC1, LC2, LC3) with distinct clinical identifies three novel molecular subtypes with distinct clinical features. MEN1 gene mutations were found to be exclusively features and provides insight into their distinctive molecular enriched in the LC2 subtype. LC1 and LC3 subtypes were signatures of tumorigenesis, diagnosis, and prognosis. Introduction of Ki67 between ACs and TCs does not enable reliable stratification between well-differentiated LCs (6, 7).
    [Show full text]
  • LEDGF/P75 Is Required for an Efficient DNA Damage Response
    International Journal of Molecular Sciences Article LEDGF/p75 Is Required for an Efficient DNA Damage Response Victoria Liedtke 1 , Christian Schröder 1, Dirk Roggenbuck 1,2 , Romano Weiss 1, Ralf Stohwasser 1,2, Peter Schierack 1,2, Stefan Rödiger 1,2,† and Lysann Schenk 1,*,† 1 Faculty of Natural Sciences, Brandenburg University of Technology Cottbus-Senftenberg, 01968 Senftenberg, Germany; [email protected] (V.L.); [email protected] (C.S.); [email protected] (D.R.); [email protected] (R.W.); [email protected] (R.S.); [email protected] (P.S.); [email protected] (S.R.) 2 Faculty of Health Sciences Brandenburg, Brandenburg University of Technology Cottbus-Senftenberg, 01968 Senftenberg, Germany * Correspondence: [email protected] † Shared senior authorship. Abstract: Lens epithelium-derived growth factor splice variant of 75 kDa (LEDGF/p75) plays an important role in cancer, but its DNA-damage repair (DDR)-related implications are still not com- pletely understood. Different LEDGF model cell lines were generated: a complete knock-out of LEDGF (KO) and re-expression of LEDGF/p75 or LEDGF/p52 using CRISPR/Cas9 technology. Their proliferation and migration capacity as well as their chemosensitivity were determined, which was followed by investigation of the DDR signaling pathways by Western blot and immunofluorescence. LEDGF-deficient cells exhibited a decreased proliferation and migration as well as an increased sensitivity toward etoposide. Moreover, LEDGF-depleted cells showed a significant reduction in Citation: Liedtke, V.; Schröder, C.; the recruitment of downstream DDR-related proteins such as replication protein A 32 kDa subunit Roggenbuck, D.; Weiss, R.; (RPA32) after exposure to etoposide.
    [Show full text]
  • A Critical Role for Alternative Polyadenylation Factor CPSF6 in Targeting HIV-1 Integration to Transcriptionally Active Chromatin
    A critical role for alternative polyadenylation factor CPSF6 in targeting HIV-1 integration to transcriptionally active chromatin Gregory A. Sowda, Erik Serraoa, Hao Wanga, Weifeng Wanga, Hind J. Fadelb, Eric M. Poeschlac, and Alan N. Engelmana,1 aDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA 02215; bDivision of Infectious Diseases, Department of Medicine, Mayo Clinic, Rochester, MN 55905; and cDivision of Infectious Diseases, University of Colorado School of Medicine, Denver, CO 80045 Edited by Stephen P. Goff, Columbia University College of Physicians and Surgeons, New York, NY, and approved January 14, 2016 (received for review December 8, 2015) Integration is vital to retroviral replication and influences the Active nuclear transport of the HIV-1 preintegration complex establishment of the latent HIV reservoir. HIV-1 integration favors (PIC), which is required for virus replication, is principally me- active genes, which is in part determined by the interaction between diated by the viral capsid (CA) protein (11). Several factors integrase and lens epithelium-derived growth factor (LEDGF)/p75. implicated in PIC nuclear import, including nucleoporins (NUPs) Because gene targeting remains significantly enriched, relative to 153 and 358 and cleavage and polyadenylation specificity factor 6 random in LEDGF/p75 deficient cells, other host factors likely (CPSF6), have been shown to bind HIV-1 CA (reviewed in ref. contribute to gene-tropic integration. Nucleoporins 153 and 358, 12). Amino acid substitutions in CA that reduce binding to each which bind HIV-1 capsid, play comparatively minor roles in of these factors can significantly alter the integration profile of integration targeting, but the influence of another capsid binding HIV-1 (13, 14).
    [Show full text]
  • LEDGF/P75 Functions Downstream from Preintegration Complex Formation to Effect Gene-Specific HIV-1 Integration
    Downloaded from genesdev.cshlp.org on October 1, 2021 - Published by Cold Spring Harbor Laboratory Press LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration Ming-Chieh Shun,1,4 Nidhanapati K. Raghavendra,1,4 Nick Vandegraaff,1,4,5 Janet E. Daigle,1 Siobhan Hughes,2 Paul Kellam,3 Peter Cherepanov,2,7 and Alan Engelman1,6 1Department of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Division of AIDS, Harvard Medical School, Boston, Massachusetts 02115, USA; 2Division of Medicine, Imperial College London, St. Mary’s Campus, London W2 1PG, United Kingdom; 3Department of Infection, University College London, London W1T 4JF, United Kingdom LEDGF/p75 directly interacts with lentiviral integrase proteins and can modulate their enzymatic activities and chromosomal association. A novel genetic knockout model was established that allowed us for the first time to analyze HIV-1 integration in the absence of LEDGF/p75 protein. Supporting a crucial role for the cofactor in viral replication, HIV-1 vector integration and reporter gene expression were significantly reduced in LEDGF-null cells. Yet, integrase processed the viral cDNA termini normally and maintained its local target DNA sequence preference during integration. Preintegration complexes extracted from knockout cells moreover supported normal levels of DNA strand transfer activity in vitro. In contrast, HIV-1 lost its strong bias toward integrating into transcription units, displaying instead increased affinity for promoter regions and CpG islands. Our results reveal LEDGF/p75 as a critical targeting factor, commandeering lentiviruses from promoter- and/or CpG island-proximal pathways that are favored by other members of Retroviridae.
    [Show full text]
  • PSIP1/LEDGF: a New Gene Likely Involved in Sensorineural Progressive Hearing Loss
    PSIP1/LEDGF: a new gene likely involved in sensorineural progressive hearing loss The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Girotto, G., D. I. Scheffer, A. Morgan, D. Vozzi, E. Rubinato, M. Di Stazio, E. Muzzi, et al. 2015. “PSIP1/LEDGF: a new gene likely involved in sensorineural progressive hearing loss.” Scientific Reports 5 (1): 18568. doi:10.1038/srep18568. http:// dx.doi.org/10.1038/srep18568. Published Version doi:10.1038/srep18568 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:23993508 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA www.nature.com/scientificreports OPEN PSIP1/LEDGF: a new gene likely involved in sensorineural progressive hearing loss Received: 22 January 2015 Giorgia Girotto1, Déborah I. Scheffer2, Anna Morgan1, Diego Vozzi3, Elisa Rubinato1, Accepted: 20 November 2015 Mariateresa Di Stazio1, Enrico Muzzi4, Stefano Pensiero5, Anne B. Giersch6, David P. Corey2 & Published: 22 December 2015 Paolo Gasparini1 Hereditary Hearing Loss (HHL) is an extremely heterogeneous disorder. Approximately 30 out of 80 known HHL genes are associated with autosomal dominant forms. Here, we identifiedPSIP1/LEDGF (isoform p75) as a novel strong candidate gene involved in dominant HHL. Using exome sequencing we found a frameshift deletion (c.1554_1555del leading to p.E518Dfs*2) in an Italian pedigree affected by sensorineural mild-to-moderate HHL but also showing a variable eye phenotype (i.e.
    [Show full text]
  • Identification of Novel Nuclear Targets of Human Thioredoxin 1*DS
    Research © 2014 by The American Society for Biochemistry and Molecular Biology, Inc. This paper is available on line at http://www.mcponline.org Identification of Novel Nuclear Targets of Human Thioredoxin 1*□S Changgong Wu‡§, Mohit Raja Jain‡§, Qing Li‡§, Shin-ichi Oka¶, Wenge Liʈ, Ah-Ng Tony Kong**, Narayani Nagarajan¶, Junichi Sadoshima¶, William J. Simmons‡, and Hong Li‡‡‡ The dysregulation of protein oxidative post-translational & Cellular Proteomics 13: 10.1074/mcp.M114.040931, 3507– modifications has been implicated in stress-related dis- 3518, 2014. eases. Trx1 is a key reductase that reduces specific di- sulfide bonds and other cysteine post-translational mod- ifications. Although commonly in the cytoplasm, Trx1 can Oxidative stress and redox signaling imbalance have been also modulate transcription in the nucleus. However, few implicated in the development of neurodegenerative diseases Trx1 nuclear targets have been identified because of the and tissue injuries (1). One of the most common features low Trx1 abundance in the nucleus. Here, we report the observed in the neuronal tissues of patients with Alzheimer or large-scale proteomics identification of nuclear Trx1 tar- Parkinson disease is the accumulation of misfolded proteins gets in human neuroblastoma cells using an affinity cap- with oxidative post-translational modifications (2). Cells have ture strategy wherein a Trx1C35S mutant is expressed. The wild-type Trx1 contains a conserved C32XXC35 motif, evolved to utilize diverse defense mechanisms to counter the and the C32 thiol initiates the reduction of a target disul- detrimental impact of oxidative post-translational modifica- 1 fide bond by forming an intermolecular disulfide with one tions, including the engagement of the thioredoxin (Trx) fam- of the oxidized target cysteines, resulting in a transient ily of proteins, which includes cytosolic Trx1 and mitochon- Trx1–target protein complex.
    [Show full text]
  • Twenty Years of Research on the DFS70/LEDGF Autoantibody
    Ortiz‑Hernandez et al. Autoimmun Highlights (2020) 11:3 https://doi.org/10.1186/s13317‑020‑0126‑4 Autoimmunity Highlights REVIEW Open Access Twenty years of research on the DFS70/ LEDGF autoantibody‑autoantigen system: many lessons learned but still many questions Greisha L. Ortiz‑Hernandez1,2, Evelyn S. Sanchez‑Hernandez1,2 and Carlos A. Casiano1,2,3* Abstract The discovery and initial characterization 20 years ago of antinuclear autoantibodies (ANAs) presenting a dense fne speckled (DFS) nuclear pattern with strong staining of mitotic chromosomes, detected by indirect immunofuores‑ cence assay in HEp‑2 cells (HEp‑2 IIFA test), has transformed our view on ANAs. Traditionally, ANAs have been consid‑ ered as reporters of abnormal immunological events associated with the onset and progression of systemic autoim‑ mune rheumatic diseases (SARD), also called ANA‑associated rheumatic diseases (AARD), as well as clinical biomarkers for the diferential diagnosis of these diseases. However, based on our current knowledge, it is not apparent that autoantibodies presenting the DFS IIF pattern fall into these categories. These antibodies invariably target a chroma‑ tin‑associated protein designated as dense fne speckled protein of 70 kD (DFS70), also known as lens epithelium‑ derived growth factor protein of 75 kD (LEDGF/p75) and PC4 and SFRS1 Interacting protein 1 (PSIP1). This multi‑func‑ tional protein, hereafter referred to as DFS70/LEDGF, plays important roles in the formation of transcription complexes in active chromatin, transcriptional activation of specifc genes, regulation of mRNA splicing, DNA repair, and cellular survival against stress. Due to its multiple functions, it has emerged as a key protein contributing to several human pathologies, including acquired immunodefciency syndrome (AIDS), leukemia, cancer, ocular diseases, and Rett syn‑ drome.
    [Show full text]