Original Article Elevated Plasma Cathepsin B and Cystatin C Levels in Chronic Obstructive Pulmonary Disease
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Cystatins in Immune System
Journal of Cancer 2013, Vol. 4 45 Ivyspring International Publisher Journal of Cancer 2013; 4(1): 45-56. doi: 10.7150/jca.5044 Review Cystatins in Immune System Špela Magister1 and Janko Kos1,2 1. Jožef Stefan Institute, Department of Biotechnology, Ljubljana, Slovenia; 2. University of Ljubljana, Faculty of Pharmacy, Ljubljana, Slovenia. Corresponding author: Janko Kos, Ph. D., Department of Biotechnology, Jožef Stefan Institute, &Faculty of Pharmacy, University of Ljubljana, Slovenia; [email protected]; Phone+386 1 4769 604, Fax +3861 4258 031. © Ivyspring International Publisher. This is an open-access article distributed under the terms of the Creative Commons License (http://creativecommons.org/ licenses/by-nc-nd/3.0/). Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. Received: 2012.10.22; Accepted: 2012.12.01; Published: 2012.12.20 Abstract Cystatins comprise a large superfamily of related proteins with diverse biological activities. They were initially characterised as inhibitors of lysosomal cysteine proteases, however, in recent years some alternative functions for cystatins have been proposed. Cystatins pos- sessing inhibitory function are members of three families, family I (stefins), family II (cystatins) and family III (kininogens). Stefin A is often linked to neoplastic changes in epithelium while another family I cystatin, stefin B is supposed to have a specific role in neuredegenerative diseases. Cystatin C, a typical type II cystatin, is expressed in a variety of human tissues and cells. On the other hand, expression of other type II cystatins is more specific. Cystatin F is an endo/lysosome targeted protease inhibitor, selectively expressed in immune cells, suggesting its role in processes related to immune response. -
Anti-Cystatin B / Stefin B Antibody (ARG56897)
Product datasheet [email protected] ARG56897 Package: 100 μl anti-Cystatin B / Stefin B antibody Store at: -20°C Summary Product Description Rabbit Polyclonal antibody recognizes Cystatin B / Stefin B Tested Reactivity Hu Tested Application ICC/IF, IHC-P, WB Host Rabbit Clonality Polyclonal Isotype IgG Target Name Cystatin B / Stefin B Antigen Species Human Immunogen Recombinant fusion protein corresponding to aa. 1-98 of Human Cystatin B / Stefin B (NP_000091.1). Conjugation Un-conjugated Alternate Names Liver thiol proteinase inhibitor; EPM1; CPI-B; EPM1A; Cystatin-B; Stefin-B; PME; CST6; ULD; STFB Application Instructions Application table Application Dilution ICC/IF 1:50 - 1:200 IHC-P 1:50 - 1:200 WB 1:500 - 1:2000 Application Note * The dilutions indicate recommended starting dilutions and the optimal dilutions or concentrations should be determined by the scientist. Positive Control MCF7 and DU145 Calculated Mw 11 kDa Observed Size 14 kDa Properties Form Liquid Purification Affinity purified. Buffer PBS (pH 7.3), 0.02% Sodium azide and 50% Glycerol. Preservative 0.02% Sodium azide Stabilizer 50% Glycerol Storage instruction For continuous use, store undiluted antibody at 2-8°C for up to a week. For long-term storage, aliquot and store at -20°C. Storage in frost free freezers is not recommended. Avoid repeated freeze/thaw cycles. Suggest spin the vial prior to opening. The antibody solution should be gently mixed before use. www.arigobio.com 1/3 Note For laboratory research only, not for drug, diagnostic or other use. Bioinformation Gene Symbol CSTB Gene Full Name cystatin B (stefin B) Background The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. -
Stefin B (CSTB) Mouse Monoclonal Antibody [Clone ID: OTI1E8] Product Data
OriGene Technologies, Inc. 9620 Medical Center Drive, Ste 200 Rockville, MD 20850, US Phone: +1-888-267-4436 [email protected] EU: [email protected] CN: [email protected] Product datasheet for TA813046 Stefin B (CSTB) Mouse Monoclonal Antibody [Clone ID: OTI1E8] Product data: Product Type: Primary Antibodies Clone Name: OTI1E8 Applications: IHC, WB Recommended Dilution: WB 1:500, IHC 1:500 Reactivity: Human Host: Mouse Isotype: IgG1 Clonality: Monoclonal Immunogen: Human recombinant protein fragment corresponding to amino acids 1-98 of human CSTB (NP_000091) produced in E.coli. Formulation: PBS (PH 7.3) containing 1% BSA, 50% glycerol and 0.02% sodium azide. Concentration: 1 mg/ml Purification: Purified from mouse ascites fluids or tissue culture supernatant by affinity chromatography (protein A/G) Conjugation: Unconjugated Storage: Store at -20°C as received. Stability: Stable for 12 months from date of receipt. Predicted Protein Size: 11 kDa Gene Name: cystatin B Database Link: NP_000091 Entrez Gene 1476 Human P04080 This product is to be used for laboratory only. Not for diagnostic or therapeutic use. View online » ©2021 OriGene Technologies, Inc., 9620 Medical Center Drive, Ste 200, Rockville, MD 20850, US 1 / 2 Stefin B (CSTB) Mouse Monoclonal Antibody [Clone ID: OTI1E8] – TA813046 Background: The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. Some of the members are active cysteine protease inhibitors, while others have lost or perhaps never acquired this inhibitory activity. There are three inhibitory families in the superfamily, including the type 1 cystatins (stefins), type 2 cystatins and kininogens. This gene encodes a stefin that functions as an intracellular thiol protease inhibitor. -
Functional Characterization of Extracellular Protease Inhibitors of Phytophthora Infestans
FUNCTIONAL CHARACTERIZATION OF EXTRACELLULAR PROTEASE INHIBITORS OF PHYTOPHTHORA INFESTANS DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Miaoying Tian, M.S. * * * * * The Ohio State University 2005 Dissertation Committee: Dr. Sophien Kamoun, Adviser Dr. Terrence L. Graham Approved by Dr. Saskia A. Hogenhout Dr. Margaret G. Redinbaugh Adviser Dr. Guo-Liang Wang Graduate Program in Plant Pathology ABSTRACT The oomycetes form one of several lineages within the eukaryotes that independently evolved a parasitic lifestyle and are thought to have developed unique mechanisms of pathogenicity. The devastating oomycete plant pathogen Phytophthora infestans causes late blight, a ravaging disease of potato and tomato. Little is known about processes associated with P. infestans pathogenesis, particularly the suppression of host defense responses. We used data mining of P. infestans sequence databases to identify 18 extracellular protease inhibitors belonging to two major structural classes: (i) Kazal-like serine protease inhibitors (EPI1 to EPI14) and (ii) cystatin-like cysteine protease inhibitors (EPIC1 to EPIC4). A variety of molecular, biochemical and bioinformatic approaches were employed to functionally characterize these genes and investigate their roles in pathogen virulence. The 14 EPI proteins form a diverse family and appear to have evolved by domain shuffling, gene duplication, and diversifying selection to target a diverse array of serine proteases. Recombinant EPI1 and EPI10 proteins inhibited subtilisin A among major serine proteases, and inhibited and interacted with tomato P69B subtilase, a pathogenesis-related protein belonging to PR7 class. The recombinant cystatin-like cysteine protease inhibitor EPIC2B interacted with a novel tomato papain-like extracellular cysteine protease PIP1 with an implicated role in plant defense. -
1 Supporting Information for a Microrna Network Regulates
Supporting Information for A microRNA Network Regulates Expression and Biosynthesis of CFTR and CFTR-ΔF508 Shyam Ramachandrana,b, Philip H. Karpc, Peng Jiangc, Lynda S. Ostedgaardc, Amy E. Walza, John T. Fishere, Shaf Keshavjeeh, Kim A. Lennoxi, Ashley M. Jacobii, Scott D. Rosei, Mark A. Behlkei, Michael J. Welshb,c,d,g, Yi Xingb,c,f, Paul B. McCray Jr.a,b,c Author Affiliations: Department of Pediatricsa, Interdisciplinary Program in Geneticsb, Departments of Internal Medicinec, Molecular Physiology and Biophysicsd, Anatomy and Cell Biologye, Biomedical Engineeringf, Howard Hughes Medical Instituteg, Carver College of Medicine, University of Iowa, Iowa City, IA-52242 Division of Thoracic Surgeryh, Toronto General Hospital, University Health Network, University of Toronto, Toronto, Canada-M5G 2C4 Integrated DNA Technologiesi, Coralville, IA-52241 To whom correspondence should be addressed: Email: [email protected] (M.J.W.); yi- [email protected] (Y.X.); Email: [email protected] (P.B.M.) This PDF file includes: Materials and Methods References Fig. S1. miR-138 regulates SIN3A in a dose-dependent and site-specific manner. Fig. S2. miR-138 regulates endogenous SIN3A protein expression. Fig. S3. miR-138 regulates endogenous CFTR protein expression in Calu-3 cells. Fig. S4. miR-138 regulates endogenous CFTR protein expression in primary human airway epithelia. Fig. S5. miR-138 regulates CFTR expression in HeLa cells. Fig. S6. miR-138 regulates CFTR expression in HEK293T cells. Fig. S7. HeLa cells exhibit CFTR channel activity. Fig. S8. miR-138 improves CFTR processing. Fig. S9. miR-138 improves CFTR-ΔF508 processing. Fig. S10. SIN3A inhibition yields partial rescue of Cl- transport in CF epithelia. -
Expression of a Barley Cystatin Gene in Maize Enhances Resistance Against Phytophagous Mites by Altering Their Cysteine-Proteases
Expression of a barley cystatin gene in maize enhances resistance against phytophagous mites by altering their cysteine-proteases Laura Carrillo • Manuel Martínez • Koreen Ramessar • Inés Cambra • Pedro Castañera • Félix Ortego • Isabel Díaz Abstract Phytocystatins are inhibitors of cysteine-prote reproductive performance. Besides, a significant reduction ases from plants putatively involved in plant defence based of cathepsin L-like and/or cathepsin B-like activities was on their capability of inhibit heterologous enzymes. We observed when the spider mite fed on maize plants have previously characterised the whole cystatin gene expressing HvCPI-6 cystatin. These findings reveal the family members from barley (HvCPI-1 to HvCPI-13). The potential of barley cystatins as acaricide proteins to protect aim of this study was to assess the effects of barley cyst- plants against two important mite pests. atins on two phytophagous spider mites, Tetranychus urticae and Brevipalpus chilensis. The determination of Keywords Cysteine protease • Phytocystatin • Spider proteolytic activity profile in both mite species showed the mite • Transgenic maize • Tetranychus urticae • presence of the cysteine-proteases, putative targets of Brevipalpus chilensis cystatins, among other enzymatic activities. All barley cystatins, except HvCPI-1 and HvCPI-7, inhibited in vitro mite cathepsin L- and/or cathepsin B-like activities, Introduction HvCPI-6 being the strongest inhibitor for both mite species. Transgenic maize plants expressing HvCPI-6 Crop losses due to herbivorous pest, mainly insects and protein were generated and the functional integrity of the mites, are estimated to be about 8-15% of the total yield cystatin transgene was confirmed by in vitro inhibitory for major crops worldwide, despite pesticide use (Oerke effect observed against T urticae and B. -
Genomic Profiling of Short- and Long-Term Caloric Restriction Effects in the Liver of Aging Mice
Genomic profiling of short- and long-term caloric restriction effects in the liver of aging mice Shelley X. Cao, Joseph M. Dhahbi, Patricia L. Mote, and Stephen R. Spindler* Department of Biochemistry, University of California, Riverside, CA 92521 Edited by Bruce N. Ames, University of California, Berkeley, CA, and approved July 11, 2001 (received for review June 19, 2001) We present genome-wide microarray expression analysis of 11,000 aging and CR on gene expression. Control young (7-month-old; n ϭ genes in an aging potentially mitotic tissue, the liver. This organ has 3) and old (27-month-old; n ϭ 3) mice were fed 95 kcal of a a major impact on health and homeostasis during aging. The effects semipurified control diet (Harlan Teklad, Madison, WI; no. of life- and health-span-extending caloric restriction (CR) on gene TD94145) per week after weaning. Long-term CR (LT-CR) young expression among young and old mice and between long-term CR (7-month-old; n ϭ 3) and old (27-month-old; n ϭ 3) mice were fed (LT-CR) and short-term CR (ST-CR) were examined. This experimental 53 kcal of a semipurified CR diet (Harlan Teklad; no. TD94146) per design allowed us to accurately distinguish the effects of aging from week after weaning. Short-term CR (ST-CR) mice were 34-month- those of CR on gene expression. Aging was accompanied by changes old control mice that were switched to 80 kcal of CR diet for 2 in gene expression associated with increased inflammation, cellular weeks, followed by 53 kcal for 2 weeks (n ϭ 3). -
Cystatin B: Mutation Detection, Alternative Splicing and Expression in Progressive Myclonus Epilepsy of Unverricht-Lundborg Type (EPM1) Patients
European Journal of Human Genetics (2007) 15, 185–193 & 2007 Nature Publishing Group All rights reserved 1018-4813/07 $30.00 www.nature.com/ejhg ARTICLE Cystatin B: mutation detection, alternative splicing and expression in progressive myclonus epilepsy of Unverricht-Lundborg type (EPM1) patients Tarja Joensuu*,1, Mervi Kuronen1, Kirsi Alakurtti1, Saara Tegelberg1, Paula Hakala1, Antti Aalto2, Laura Huopaniemi3, Nina Aula1, Roberto Michellucci4, Kai Eriksson5 and Anna-Elina Lehesjoki1 1Department of Medical Genetics and Neuroscience Center, Folkha¨lsan Institute of Genetics, Biomedicum Helsinki, University of Helsinki, Finland; 2Institute of Biotechnology, Viikki Biocenter, University of Helsinki, Finland; 3Rational Drug Design Program, Biomedicum Helsinki, Helsinki, Finland; 4Department of Neurosciences, Epilepsy Centre, Bellaria Hospital, Bologna, Italy; 5Pediatric Neurology Unit, Department of Pediatrics, Pediatric Research Center, Medical School, University of Tampere and Tampere University Hospital, Tampere, Finland Progressive myoclonus epilepsy of Unverricht-Lundborg type (EPM1) is an autosomal recessive neurodegenerative disorder caused by mutations in the cystatin B gene (CSTB) that encodes an inhibitor of several lysosomal cathepsins. An unstable expansion of a dodecamer repeat in the CSTB promoter accounts for the majority of EPM1 disease alleles worldwide. We here describe a novel PCR protocol for detection of the dodecamer repeat expansion. We describe two novel EPM1-associated mutations, c.149G4A leading to the p.G50E missense change and an intronic 18-bp deletion (c.168 þ 1_18del), which affects splicing of CSTB. The p.G50E mutation that affects the conserved QVVAG amino acid sequence critical for cathepsin binding fails to associate with lysosomes. This further supports the previously implicated physiological importance of the CSTB-lysosome association. -
Rabbit Anti-Cystatin B/FITC Conjugated Antibody-SL5158R-FITC
SunLong Biotech Co.,LTD Tel: 0086-571- 56623320 Fax:0086-571- 56623318 E-mail:[email protected] www.sunlongbiotech.com Rabbit Anti-Cystatin B/FITC Conjugated antibody SL5158R-FITC Product Name: Anti-Cystatin B/FITC Chinese Name: FITC标记的胱抑素B/半胱氨酸蛋白酶抑制剂B抗体 CPI B; CPI-B; CST6; CSTB; Cystatin B; Cystatin-B; CYTB; EPM1; Liver thiol Alias: proteinase inhibitor; PME; STFB; CHROW21; CYTB_HUMAN; EPM1A; Stefin-B; ULD. Organism Species: Rabbit Clonality: Polyclonal React Species: Human,Mouse,Rat,Pig, IF=1:50-200 Applications: not yet tested in other applications. optimal dilutions/concentrations should be determined by the end user. Molecular weight: 14kDa Form: Lyophilized or Liquid Concentration: 1mg/ml immunogen: KLH conjugated synthetic peptide derived from human Cystatin B Lsotype: IgG Purification: affinity purified by Protein A Storage Buffer: 0.01Mwww.sunlongbiotech.com TBS(pH7.4) with 1% BSA, 0.03% Proclin300 and 50% Glycerol. Store at -20 °C for one year. Avoid repeated freeze/thaw cycles. The lyophilized antibody is stable at room temperature for at least one month and for greater than a year Storage: when kept at -20°C. When reconstituted in sterile pH 7.4 0.01M PBS or diluent of antibody the antibody is stable for at least two weeks at 2-4 °C. background: The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. Some of the members are active cysteine protease inhibitors, while others have lost or perhaps never acquired this inhibitory activity. There are three inhibitory Product Detail: families in the superfamily, including the type 1 cystatins (stefins), type 2 cystatins and kininogens. This gene encodes a stefin that functions as an intracellular thiol protease inhibitor. -
Product Data Sheet
For research purposes only, not for human use Product Data Sheet Anti-Cystatin B Antibody Catalog # Source Reactivity Applications CPA1289 Rabbit H WB, IH, IF/IC Description Rabbit polyclonal antibody to Cystatin B Immunogen KLH-conjugated synthetic peptide encompassing a sequence within the center region of human Cystatin B. The exact sequence is proprietary. Purification The antibody was purified by immunogen affinity chromatography. Specificity Recognizes endogenous levels of Cystatin B protein. Clonality Polyclonal Form Liquid in 0.42% Potassium phosphate, 0.87% Sodium chloride, pH 7.3, 30% glycerol, and 0.01% sodium azide. Dilution WB (1/500 - 1/1000), IH (1/100 - 1/200), IF/IC (1/100 - 1/500) Gene Symbol CSTB Alternative Names CST6; STFB; Cystatin-B; CPI-B; Liver thiol proteinase inhibitor; Stefin-B Entrez Gene 1476 (Human) SwissProt P04080 (Human) Storage/Stability Shipped at 4°C. Upon delivery aliquot and store at -20°C for one year. Avoid freeze/thaw cycles. Application key: E- ELISA, WB- Western blot, IH- Immunohistochemistry, IF- Immunofluorescence, FC- Flow cytometry, IC- Immunocytochemistry, IP- Immunoprecipitation, ChIP- Chromatin Immunoprecipitation, EMSA- Electrophoretic Mobility Shift Assay, BL- Blocking, SE- Sandwich ELISA, CBE- Cell-based ELISA, RNAi- RNA interference Species reactivity key: H- Human, M- Mouse, R- Rat, B- Bovine, C- Chicken, D- Dog, G- Goat, Mk- Monkey, P- Pig, Rb- Rabbit, S- Sheep, Z- Zebrafish COHESION BIOSCIENCES LIMITED WEB ORDER SUPPORT CUSTOM www.cohesionbio.com [email protected] [email protected] [email protected] For research purposes only, not for human use Product Data Sheet Western blot analysis of Cystatin B expression in JAR (A), EOC20 (B), U87MG (C) whole cell lysates. -
Molecular Cloning and Characterization of Cystatin, a Cysteine Protease Inhibitor, from Bufo Melanostictus
Biosci. Biotechnol. Biochem., 77 (10), 2077–2081, 2013 Molecular Cloning and Characterization of Cystatin, a Cysteine Protease Inhibitor, from Bufo melanostictus y Wa LIU,1 Senlin JI,1 A-Mei ZHANG,2 Qinqin HAN,1 Yue FENG,2 and Yuzhu SONG1; 1Engineering Research Center for Molecular Diagnosis, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, Yunnan 650500, China 2Laboratory of Molecular Virology, Faculty of Life Sciences and Technology, Kunming University of Science and Technology, Kunming, Yunnan 650500, China Received May 31, 2013; Accepted July 17, 2013; Online Publication, October 7, 2013 [doi:10.1271/bbb.130424] Cystatins are efficient inhibitors of papain-like cys- inhibit pathogens, such as CP1 from green kiwi fruit, teine proteinases, and they serve various important which exhibits antifungal activity against Alternaria physiological functions. In this study, a novel cystatin, radicina and Botrytis cinerea both in vitro and in vivo;2) Cystatin-X, was cloned from a cDNA library of the skin the cystatin gene in wheat, which provides resistance of Bufo melanostictus. The single nonglycosylated poly- against Karnal bunt, caused by Tilletia indica;3) and peptide chain of Cystatin-X consisted of 102 amino acid chicken cystatins, which inhibit the growth of Porphyr- residues, including seven cysteines. Evolutionary analy- omonas gingivalis.4) A small number of cystatins from sis indicated that Cystatin-X can be grouped with family amphibians have been identified by means of genome 1 cystatins. It contains cystatin-conserved motifs known and transcriptome sequencing, but their functions have to interact with the active site of cysteine proteinases. -
Crystal Structure of the Parasite Inhibitor Chagasin In
Crystal structure of the parasite inhibitor chagasin in complex with papain allows identification of structural requirements for broad reactivity and specificity determinants for target proteases Izabela Redzynia1,*, Anna Ljunggren2,*, Anna Bujacz1, Magnus Abrahamson2, Mariusz Jaskolski3,4 and Grzegorz Bujacz1,4 1 Institute of Technical Biochemistry, Faculty of Biotechnology and Food Sciences, Technical University of Lodz, Poland 2 Department of Laboratory Medicine, Division of Clinical Chemistry and Pharmacology, Lund University, Sweden 3 Department of Crystallography, Faculty of Chemistry, A. Mickiewicz University, Poznan, Poland 4 Center for Biocrystallographic Research, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland Keywords A complex of chagasin, a protein inhibitor from Trypanosoma cruzi, and Chagas disease; cruzipain; cysteine papain, a classic family C1 cysteine protease, has been crystallized. Kinetic proteases; papain; protein inhibitors studies revealed that inactivation of papain by chagasin is very fast ) ) (k = 1.5 · 106 m 1Æs 1), and results in the formation of a very tight, Correspondence on m G. Bujacz, Institute of Technical Biochemis- reversible complex (Ki =36p ), with similar or better rate and equilib- try, Faculty of Biotechnology and Food rium constants than those for cathepsins L and B. The high-resolution Sciences, Technical University of Lodz, ul. crystal structure shows an inhibitory wedge comprising three loops, which Stefanowskiego 4/10, 90-924 Lodz, Poland forms a number of contacts responsible for the high-affinity binding. Com- Fax: +48 42 636 66 18 parison with the structure of papain in complex with human cystatin B Tel: +48 42 631 34 31 reveals that, despite entirely different folding, the two inhibitors utilize very E-mail: [email protected] similar atomic interactions, leading to essentially identical affinities for the M.