Ladder-Shaped Ion Channel Ligands: Current State of Knowledge
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Microorganisms
microorganisms Review The Genetic Basis of Toxin Biosynthesis in Dinoflagellates Arjun Verma 1,* , Abanti Barua 1,2, Rendy Ruvindy 1, Henna Savela 3, Penelope A. Ajani 1 and Shauna A. Murray 1 1 Climate Change Cluster, University of Technology Sydney, Sydney 2007, Australia 2 Department of Microbiology, Noakhali Science and Technology University, Chittagong 3814, Bangladesh 3 Finnish Environment Institute, Marine Research Centre, 00790 Helsinki, Finland * Correspondence: [email protected] Received: 22 June 2019; Accepted: 27 July 2019; Published: 29 July 2019 Abstract: In marine ecosystems, dinoflagellates can become highly abundant and even dominant at times, despite their comparatively slow growth rates. One factor that may play a role in their ecological success is the production of complex secondary metabolite compounds that can have anti-predator, allelopathic, or other toxic effects on marine organisms, and also cause seafood poisoning in humans. Our knowledge about the genes involved in toxin biosynthesis in dinoflagellates is currently limited due to the complex genomic features of these organisms. Most recently, the sequencing of dinoflagellate transcriptomes has provided us with valuable insights into the biosynthesis of polyketide and alkaloid-based toxin molecules in dinoflagellate species. This review synthesizes the recent progress that has been made in understanding the evolution, biosynthetic pathways, and gene regulation in dinoflagellates with the aid of transcriptomic and other molecular genetic tools, and provides a pathway for future studies of dinoflagellates in this exciting omics era. Keywords: dinoflagellates; toxins; transcriptomics; polyketides; alkaloids 1. Introduction Marine microbial eukaryotes are a diverse group of organisms comprising lineages that differ widely in their evolutionary histories, ecological niches, growth requirements, and nutritional strategies [1–5]. -
Influence of Environmental Parameters on Karenia Selliformis Toxin Content in Culture
Cah. Biol. Mar. (2009) 50 : 333-342 Influence of environmental parameters on Karenia selliformis toxin content in culture Amel MEDHIOUB1, Walid MEDHIOUB3,2, Zouher AMZIL2, Manoella SIBAT2, Michèle BARDOUIL2, Idriss BEN NEILA3, Salah MEZGHANI3, Asma HAMZA1 and Patrick LASSUS2 (1) INSTM, Institut National des Sciences et Technologies de la Mer. Laboratoire d'Aquaculture, 28, rue 2 Mars 1934, 2025 Salammbo, Tunisie. E-mail: [email protected] (2) IFREMER, Département Environnement, Microbiologie et Phycotoxines, BP 21105, 44311 Nantes, France. (3) IRVT, Institut de la Recherche Vétérinaire de Tunisie, centre régional de Sfax. Route de l'aéroport, km 1, 3003 Sfax, Tunisie Abstract: Karenia selliformis strain GM94GAB was isolated in 1994 from the north of Sfax, Gabès gulf, Tunisia. This species, which produces gymnodimine (GYM) a cyclic imine, has since been responsible for chronic contamination of Tunisian clams. A study was made by culturing the microalgae on enriched Guillard f/2 medium. The influence of growing conditions on toxin content was studied, examining the effects of (i) different culture volumes (0.25 to 40 litre flasks), (ii) two temperature ranges (17-15°C et 20-21°C) and (iii) two salinities (36 and 44). Chemical analyses were made by mass spectrometry coupled with liquid chromatography (LC-MS/MS). Results showed that (i) the highest growth rate (0.34 ± 0.14 div d-1) was obtained at 20°C and a salinity of 36, (ii) GYM content expressed as pg eq GYM cell-1 increased with culture time. The neurotoxicity of K. selliformis extracts was confirmed by mouse bioassay. This study allowed us to cal- culate the minimal lethal dose (MLD) of gymnodimine (GYM) that kills a mouse, as a function of the number of K. -
Development of a Quantitative PCR Assay for the Detection And
bioRxiv preprint doi: https://doi.org/10.1101/544247; this version posted February 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Development of a quantitative PCR assay for the detection and enumeration of a potentially ciguatoxin-producing dinoflagellate, Gambierdiscus lapillus (Gonyaulacales, Dinophyceae). Key words:Ciguatera fish poisoning, Gambierdiscus lapillus, Quantitative PCR assay, Great Barrier Reef Kretzschmar, A.L.1,2, Verma, A.1, Kohli, G.S.1,3, Murray, S.A.1 1Climate Change Cluster (C3), University of Technology Sydney, Ultimo, 2007 NSW, Australia 2ithree institute (i3), University of Technology Sydney, Ultimo, 2007 NSW, Australia, [email protected] 3Alfred Wegener-Institut Helmholtz-Zentrum fr Polar- und Meeresforschung, Am Handelshafen 12, 27570, Bremerhaven, Germany Abstract Ciguatera fish poisoning is an illness contracted through the ingestion of seafood containing ciguatoxins. It is prevalent in tropical regions worldwide, including in Australia. Ciguatoxins are produced by some species of Gambierdiscus. Therefore, screening of Gambierdiscus species identification through quantitative PCR (qPCR), along with the determination of species toxicity, can be useful in monitoring potential ciguatera risk in these regions. In Australia, the identity, distribution and abundance of ciguatoxin producing Gambierdiscus spp. is largely unknown. In this study we developed a rapid qPCR assay to quantify the presence and abundance of Gambierdiscus lapillus, a likely ciguatoxic species. We assessed the specificity and efficiency of the qPCR assay. The assay was tested on 25 environmental samples from the Heron Island reef in the southern Great Barrier Reef, a ciguatera endemic region, in triplicate to determine the presence and patchiness of these species across samples from Chnoospora sp., Padina sp. -
Effects of Marine Harmful Algal Blooms on Bivalve Cellular Immunity and Infectious Diseases: a Review
Effects of marine Harmful Algal Blooms on bivalve cellular immunity and infectious diseases: a review Malwenn Lassudrie, Helene Hegaret, Gary Wikfors, Patricia Mirella da Silva To cite this version: Malwenn Lassudrie, Helene Hegaret, Gary Wikfors, Patricia Mirella da Silva. Effects of marine Harm- ful Algal Blooms on bivalve cellular immunity and infectious diseases: a review. Developmental and Comparative Immunology, Elsevier, 2020, 108, pp.103660. 10.1016/j.dci.2020.103660. hal-02880026 HAL Id: hal-02880026 https://hal.archives-ouvertes.fr/hal-02880026 Submitted on 24 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Effects of marine Harmful Algal Blooms on bivalve cellular immunity and infectious diseases: a review Malwenn Lassudrie1, Hélène Hégaret2, Gary H. Wikfors3, Patricia Mirella da Silva4 1 Ifremer, LER-BO, F- 29900 Concarneau, France. 2 CNRS, Univ Brest, IRD, Ifremer, LEMAR, F-29280, Plouzané, France. 3 NOAA Fisheries Service, Northeast Fisheries Science Center, Milford, CT 0640 USA. 4 Laboratory of Immunology and Pathology of Invertebrates, Department of Molecular Biology, Federal University of Paraíba (UFPB), Paraíba, Brazil. Abstract Bivalves were long thought to be “symptomless carriers” of marine microalgal toxins to human seafood consumers. -
Treatment Protocol Copyright © 2018 Kostoff Et Al
Prevention and reversal of Alzheimer's disease: treatment protocol Copyright © 2018 Kostoff et al PREVENTION AND REVERSAL OF ALZHEIMER'S DISEASE: TREATMENT PROTOCOL by Ronald N. Kostoffa, Alan L. Porterb, Henry. A. Buchtelc (a) Research Affiliate, School of Public Policy, Georgia Institute of Technology, USA (b) Professor Emeritus, School of Public Policy, Georgia Institute of Technology, USA (c) Associate Professor, Department of Psychiatry, University of Michigan, USA KEYWORDS Alzheimer's Disease; Dementia; Text Mining; Literature-Based Discovery; Information Technology; Treatments Prevention and reversal of Alzheimer's disease: treatment protocol Copyright © 2018 Kostoff et al CITATION TO MONOGRAPH Kostoff RN, Porter AL, Buchtel HA. Prevention and reversal of Alzheimer's disease: treatment protocol. Georgia Institute of Technology. 2018. PDF. https://smartech.gatech.edu/handle/1853/59311 COPYRIGHT AND CREATIVE COMMONS LICENSE COPYRIGHT Copyright © 2018 by Ronald N. Kostoff, Alan L. Porter, Henry A. Buchtel Printed in the United States of America; First Printing, 2018 CREATIVE COMMONS LICENSE This work can be copied and redistributed in any medium or format provided that credit is given to the original author. For more details on the CC BY license, see: http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License<http://creativecommons.org/licenses/by/4.0/>. DISCLAIMERS The views in this monograph are solely those of the authors, and do not represent the views of the Georgia Institute of Technology or the University of Michigan. This monograph is not intended as a substitute for the medical advice of physicians. The reader should regularly consult a physician in matters relating to his/her health and particularly with respect to any symptoms that may require diagnosis or medical attention. -
1 Gambierol 1 2 3 4 Makoto Sasaki, Eva Cagide, and 5 M
34570 FM i-xviii.qxd 2/9/07 9:16 AM Page i PHYCOTOXINS Chemistry and Biochemistry 34570 FM i-xviii.qxd 2/9/07 9:16 AM Page iii PHYCOTOXINS Chemistry and Biochemistry Luis M. Botana Editor 34570 FM i-xviii.qxd 2/9/07 9:16 AM Page iv 1 2 3 Dr. Luis M. Botana is professor of Pharmacology, University of Santiago de Compostela, Spain. His group is a 4 world leader in the development of new methods to monitor the presence of phycotoxins, having developed 5 methods to date for saxitoxins, yessotoxin, pectenotoxin, ciguatoxins, brevetoxins, okadaic acid and dinophy- 6 sistoxins. Dr. Botana is the editor of Seafood and Freshwater Toxins: Pharmacology, Physiology and Detection, 7 to date the only comprehensive reference book entirely devoted to marine toxins. 8 ©2007 Blackwell Publishing 9 All rights reserved 10 1 Blackwell Publishing Professional 2 2121 State Avenue, Ames, Iowa 50014, USA 3 4 Orders: 1-800-862-6657 5 Office: 1-515-292-0140 6 Fax: 1-515-292-3348 7 Web site: www.blackwellprofessional.com 8 Blackwell Publishing Ltd 9 9600 Garsington Road, Oxford OX4 2DQ, UK 20 Tel.: +44 (0)1865 776868 1 2 Blackwell Publishing Asia 3 550 Swanston Street, Carlton, Victoria 3053, Australia 4 Tel.: +61 (0)3 8359 1011 5 6 Authorization to photocopy items for internal or personal use, or the internal or personal use of specific clients, 7 is granted by Blackwell Publishing, provided that the base fee is paid directly to the Copyright Clearance Cen- 8 ter, 222 Rosewood Drive, Danvers, MA 01923. -
A A–803467, 98 Absorption, Distribution, Metabolism, Elimination
Index A Anxiety disorders, 55 A–803467, 98 APD. See Action potential duration Absorption, distribution, metabolism, Arrhythmias, 45, 46 elimination and toxicity Aryl sulfonamido indanes, 126–128, 130 (ADMET), 193 ATP-sensitive potassium channels (KATP Absorption, distribution, metabolism, channels), 61 excretion, and toxicity Atrial effective refractory period (AERP), 122, (ADMET), 68 124–126, 128, 129, 132, 138 Acetylcholine binding protein (AChBP), Autoimmune diseases, 254 61, 62, 64 AZD7009, 101 Acetylcholine receptor (AChR), 57, 64 Azimilide, 139 Action potential duration (APD), 120, 122, 123, 128, 132 B Action potentials, 243, 256, 259 Basis set, 69–70 ADME/T, 299, 304 b-Barrel membrane proteins AERP. See Atrial effective refractory period genome-wide annotation, 13 Agitoxin (AgTX), 60 machine-learning techniques Agonists, 59–61, 64 residue pair preference, 11 Alinidine, 40–42 TMBs, 10 ALS. See Amyotrophic lateral sclerosis pipeline, genomic sequences, 14 Alzheimer, 55, 61 statistical method, 9–10 AMBER, 61, 65 Bending hinge, 64 2-Amino–2-imidazolidinone, 123, 125 Benzanilide, 256–257 Ammi visnaga, 254 Benzimidazolone, 256–257 b-Amyloid peptide (Ab), 62–63, 65 Benzocaine, 140 Amyotrophic lateral sclerosis (ALS), 90, 94, Benzodiazepines, 245 101 Benzopyrane, 127–128 Anionic channel blockers Benzopyrans, 61, 246–251, 261 mechanism of action of, 329–330 Benzothiadiazine 1,1-dioxide, 252–254 Antagonists, 59, 60 Benzothiadiazines, 253 Antiarrhythmic, 65–66, 68, 99, 101 Benzothiazepine, 70 Antiarrhythmic agents Benzothiazine derivatives, 251–252 class I, 245 Benzotriazole, 256–257 class II, 245 Bestrophins, 321, 322, 330, 331 class III, 245 Big potassium channels (BK channels), Antidepressant, 65–67 256, 257 Antiepileptic, 46 Bupivacaine, 56, 58, 59, 64, 69, 140 S.P. -
Marine Natural Products and Their Potential Application in the Future
AJSTD Vol. 22 Issue 4 pp. 297-311 (2005) MARINE NATURAL PRODUCTS AND THEIR POTENTIAL APPLICATION IN THE FUTURE Chau Van Minh*, Phan Van Kiem, and Nguyen Hai Dang Institute of Natural Products Chemistry, Vietnamese Academy of Science and Technology 18 Hoang Quoc Viet Road, Cau Giay, Hanoi, Vietnam Received 04 November 2005 1. INTRODUCTION Oceans are the diverse resource, which cover more than 70% of the earth’s surface. No doubt, with 34 of 36 phyla of life represented, oceans are the greatest biodiversity in the world [1]. They are the extraordinary natural source of microorganism, algae, sponge, coelenterate, bryozoan, mollusk, and echinoderm… Especially, on coral reef, where shelter more than 1000 species per m2. Surprisingly, there is only a small number of researches in this field. Therefore increasing research on marine natural source may provide good results for exploiting and developing valuable natural products which benefit for human. Marine environment is a rich source of biological and chemical diversity. The diversity has been unique source of chemical compounds of potential for pharmaceuticals, cosmetics, dietary supplements, and agrochemicals. Ecological pressure, including competitions for food and space, the fouling of predator and surface, has led to the evolution of secondary metabolites with various biological activities. Many organisms are soft bodies and/or unmoved, hardly survive with the threat from around environment. Hence they have evolved the ability to synthesize toxic compounds or obtain them from microorganism to defense against predator or to paralyze their prey. The questions such as, why do fish not eat particular algae? Why do two sponges grow and expand until they reach but not grow over each other? may be explained by these reasons. -
Toxicity and Nutritional Inadequacy of Karenia Brevis: Synergistic Mechanisms Disrupt Top-Down Grazer Control
Vol. 444: 15–30, 2012 MARINE ECOLOGY PROGRESS SERIES Published January 10 doi: 10.3354/meps09401 Mar Ecol Prog Ser OPEN ACCESS Toxicity and nutritional inadequacy of Karenia brevis: synergistic mechanisms disrupt top-down grazer control Rebecca J. Waggett1,2,*, D. Ransom Hardison1, Patricia A. Tester1 1National Ocean Service, National Oceanic and Atmospheric Administration, 101 Pivers Island Road, Beaufort, North Carolina 28516-9722, USA 2Present address: The University of Tampa, 401 W. Kennedy Blvd., Tampa, Florida 33606, USA ABSTRACT: Zooplankton grazers are capable of influencing food-web dynamics by exerting top- down control over phytoplankton prey populations. Certain toxic or unpalatable algal species have evolved mechanisms to disrupt grazer control, thereby facilitating the formation of massive, monospecific blooms. The harmful algal bloom (HAB)-forming dinoflagellate Karenia brevis has been associated with lethal and sublethal effects on zooplankton that may offer both direct and indirect support of bloom formation and maintenance. Reductions in copepod grazing on K. brevis have been attributed to acute physiological incapacitation and nutritional inadequacy. To evalu- ate the potential toxicity or nutritional inadequacy of K. brevis, food removal and egg production experiments were conducted using the copepod Acartia tonsa and K. brevis strains CCMP 2228, Wilson, and SP-1, characterized using liquid chromatography-mass spectrometry (LC-MS) as hav- ing high, low, and no brevetoxin levels, respectively. Variable grazing rates were found in exper- iments involving mixtures of toxic CCMP 2228 and Wilson strains. However, in experiments with toxic CCMP 2228 and non-toxic SP-1 strains, A. tonsa grazed SP-1 at significantly higher rates than the toxic alternative. -
Toxigenic Algae and Associated Phycotoxins in Two Coastal
Harmful Algae 55 (2016) 191–201 Contents lists available at ScienceDirect Harmful Algae jo urnal homepage: www.elsevier.com/locate/hal Toxigenic algae and associated phycotoxins in two coastal embayments in the Ebro Delta (NW Mediterranean) a,b, c c c Julia A. Busch *, Karl B. Andree , Jorge Dioge`ne , Margarita Ferna´ndez-Tejedor , b b b b b Kerstin Toebe , Uwe John , Bernd Krock , Urban Tillmann , Allan D. Cembella a University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment, 26111 Oldenburg, Germany b Alfred-Wegener-Institut, Helmholtz-Zentrum fu¨r Polar- und Meeresforschung, 27570 Bremerhaven, Germany c IRTA, Ctra Poble Nou km 5,5, 43540 Sant Carles de la Rapita, Tarragona, Spain A R T I C L E I N F O A B S T R A C T Article history: Harmful Algal Bloom (HAB) surveillance is complicated by high diversity of species and associated Received 21 August 2015 phycotoxins. Such species-level information on taxonomic affiliations and on cell abundance and toxin Received in revised form 24 February 2016 content is, however, crucial for effective monitoring, especially of aquaculture and fisheries areas. The Accepted 29 February 2016 aim addressed in this study was to determine putative HAB taxa and related phycotoxins in plankton from aquaculture sites in the Ebro Delta, NW Mediterranean. The comparative geographical distribution Keywords: of potentially harmful plankton taxa was established by weekly field sampling throughout the water HAB surveillance column during late spring–early summer over two years at key stations in Alfacs and Fangar Semi-enclosed embayment embayments within the Ebro Delta. -
Marine Phytoplankton Atlas of Kuwait's Waters
Marine Phytoplankton Atlas of Kuwait’s Waters Marine Phytoplankton Atlas Marine Phytoplankton Atlas of Kuwait’s Waters Marine Phytoplankton Atlas of Kuwait’s of Kuwait’s Waters Manal Al-Kandari Dr. Faiza Y. Al-Yamani Kholood Al-Rifaie ISBN: 99906-41-24-2 Kuwait Institute for Scientific Research P.O.Box 24885, Safat - 13109, Kuwait Tel: (965) 24989000 – Fax: (965) 24989399 www.kisr.edu.kw Marine Phytoplankton Atlas of Kuwait’s Waters Published in Kuwait in 2009 by Kuwait Institute for Scientific Research, P.O.Box 24885, 13109 Safat, Kuwait Copyright © Kuwait Institute for Scientific Research, 2009 All rights reserved. ISBN 99906-41-24-2 Design by Melad M. Helani Printed and bound by Lucky Printing Press, Kuwait No part of this work may be reproduced or utilized in any form or by any means electronic or manual, including photocopying, or by any information or retrieval system, without the prior written permission of the Kuwait Institute for Scientific Research. 2 Kuwait Institute for Scientific Research - Marine phytoplankton Atlas Kuwait Institute for Scientific Research Marine Phytoplankton Atlas of Kuwait’s Waters Manal Al-Kandari Dr. Faiza Y. Al-Yamani Kholood Al-Rifaie Kuwait Institute for Scientific Research Kuwait Kuwait Institute for Scientific Research - Marine phytoplankton Atlas 3 TABLE OF CONTENTS CHAPTER 1: MARINE PHYTOPLANKTON METHODOLOGY AND GENERAL RESULTS INTRODUCTION 16 MATERIAL AND METHODS 18 Phytoplankton Collection and Preservation Methods 18 Sample Analysis 18 Light Microscope (LM) Observations 18 Diatoms Slide Preparation -
Review of Harmful Algal Blooms in the Coastal Mediterranean Sea, with a Focus on Greek Waters
diversity Review Review of Harmful Algal Blooms in the Coastal Mediterranean Sea, with a Focus on Greek Waters Christina Tsikoti 1 and Savvas Genitsaris 2,* 1 School of Humanities, Social Sciences and Economics, International Hellenic University, 57001 Thermi, Greece; [email protected] 2 Section of Ecology and Taxonomy, School of Biology, Zografou Campus, National and Kapodistrian University of Athens, 16784 Athens, Greece * Correspondence: [email protected]; Tel.: +30-210-7274249 Abstract: Anthropogenic marine eutrophication has been recognized as one of the major threats to aquatic ecosystem health. In recent years, eutrophication phenomena, prompted by global warming and population increase, have stimulated the proliferation of potentially harmful algal taxa resulting in the prevalence of frequent and intense harmful algal blooms (HABs) in coastal areas. Numerous coastal areas of the Mediterranean Sea (MS) are under environmental pressures arising from human activities that are driving ecosystem degradation and resulting in the increase of the supply of nutrient inputs. In this review, we aim to present the recent situation regarding the appearance of HABs in Mediterranean coastal areas linked to anthropogenic eutrophication, to highlight the features and particularities of the MS, and to summarize the harmful phytoplankton outbreaks along the length of coastal areas of many localities. Furthermore, we focus on HABs documented in Greek coastal areas according to the causative algal species, the period of occurrence, and the induced damage in human and ecosystem health. The occurrence of eutrophication-induced HAB incidents during the past two decades is emphasized. Citation: Tsikoti, C.; Genitsaris, S. Review of Harmful Algal Blooms in Keywords: HABs; Mediterranean Sea; eutrophication; coastal; phytoplankton; toxin; ecosystem the Coastal Mediterranean Sea, with a health; disruptive blooms Focus on Greek Waters.