国家重点保护野生动物名录(征求意见稿) 调整情 中文名 学名 建议保护级别 备注 况 脊索动物门 CHORDATA 兽纲 MAMMALA 灵长目 PRIMATES 懒猴科 Lorisidae 懒猴属所有种 Nycticebus Spp
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Dynamic Genetic Diversity and Population Structure of Coreius Guichenoti
ZooKeys 1055: 135–148 (2021) A peer-reviewed open-access journal doi: 10.3897/zookeys.1055.70117 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research Dynamic genetic diversity and population structure of Coreius guichenoti Dongqi Liu1*, Feng Lan2*, Sicai Xie1, Yi Diao1, Yi Zheng1, Junhui Gong1 1 Sichuan Province Key Laboratory of Characteristic Biological Resources of Dry and Hot River Valley, Pan- zhihua University, Panzhihua, 617000, China 2 Upper Changjiang River Burean of Hydrological and Water Resources Survey, Chongqing, 400000, China Corresponding author: Feng Lan ([email protected]) Academic editor: M.E. Bichuette | Received 14 June 2021 | Accepted 27 July 2021 | Published 11 August 2021 http://zoobank.org/ADECA19A-B689-47AE-971B-42913F28F5CE Citation: Liu D, Lan F, Xie S, Diao Y, Zheng Y, Gong J (2021) Dynamic genetic diversity and population structure of Coreius guichenoti. ZooKeys 1055: 135–148. https://doi.org/10.3897/zookeys.1055.70117 Abstract To investigate the genetic effects on the population of Coreius guichenoti of dam constructions in the upper reaches of the Yangtze River, we analyzed the genetic diversity and population structure of 12 popula- tions collected in 2009 and 2019 using mitochondrial DNA (mtDNA) control regions. There was no significant difference in genetic diversity between 2009 and 2019P ( > 0.05), but the population structure tended to become stronger. Genetic differentiation (FST) among five populations (LX, BB, YB, SF and JA) collected in 2009 was not significant P( > 0.05). However, some populations collected in 2019 were significantly differentiated (P < 0.05), indicating that the population structure has undergone change. -
Volume Lviii, 1928-1929
BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY VOLUME LVIII, 1928-1929 BOONE BRADLEY AND BEQUAERT CHAPMAN NICHOLS CURRAN NOBLE ELFTMAN STUNKARD GUDGER WATERMAN NEW YORK PUBLISHED BY ORDER OF THE TRUSTEES 1929 EDITED BY ETHEL J. TIMONIER B U LLETI N OF THE AMERICAN MUSEUM OF NATURAL HISTORY VOLUME LVIII, 1928 59.7,5 (51) Article 1.-CHINESE FRESH-WATER FISHES IN THE AMERICAN MUSEUM OF NATURAL HISTORY'S COLLECTIONS' A PROVISIONAL CHECK-LIST OF THE FRESH-WATER FISHES OF CHINA2 BY J. T. NICHOLS Incident to study of the Museum's recently acquired Asiatic collec- tions, a number of new species and races of Chinese fresh-water fishes have been described. A somewhat more complete report on Chinese material to hand may now appropriately be made by listing all the species examined. Much more study is necessary before an authoritative check- list of the fishes of this area can be drawn up, but it should be helpful to others working to that end to list, with species contained in our collec- tions, those encountered in the literature which offhand appear to be valid. The asterisk (*) signifies a specimen in The American Museum of Natural History. Only strictly fresh-water fishes are included in this list, marine forms, the occurrence of which in fresh water is fortuitous, are not included; nor are representatives of essentially marine groups, even when such species occur regularly in fresh as well as in salt water. The area is restricted to old China from the outer limits of Chihli Province on the northeast to the outer. -
Potential Effects of Dam Cascade on Fish
Rev Fish Biol Fisheries DOI 10.1007/s11160-015-9395-9 ORIGINAL RESEARCH Potential effects of dam cascade on fish: lessons from the Yangtze River Fei Cheng . Wei Li . Leandro Castello . Brian R. Murphy . Songguang Xie Received: 23 October 2014 / Accepted: 13 July 2015 Ó Springer International Publishing Switzerland 2015 Abstract Construction of hydroelectric dams affect Corieus guichenoti will have a high risk of extinction river ecosystems, fish diversity, and fisheries yields. due to the combined effects of impoundment and However, there are no studies assessing the combined blocking. Modification of the flow regime will effects on fish caused by several adjacent dams and adversely affect the recruitment of 26 species that their reservoirs, as in a ‘dam cascade’. This study produce drifting eggs. The start of annual spawning for predicts the potential effects that a cascade of ten dams 13 fishes will be postponed by more than 1 month, and currently under construction in the upper Yangtze fish spawning and growth opportunities will be River in China will have on local fishes, and uses such reduced due to low water temperatures associated predictions to assess the effectiveness of possible fish with hypolimnetic discharges. Combined dam effects conservation measures. We found that the dam will further reduce the likelihood of successful cascade will have serious combined effects on fishes recruitment of some endangered species, such as mainly due to impoundment, habitat fragmentation Acipenser dabryanus and Psephurus gladius. Three and blocking, flow regime modification, and hypolim- countermeasures hold promise to mitigate the near- netic discharges. The impoundments will cause loss of term effects of the dam cascade, including preserva- critical habitats for 46 endemic species. -
Beta Diversity Patterns of Fish and Conservation Implications in The
A peer-reviewed open-access journal ZooKeys 817: 73–93 (2019)Beta diversity patterns of fish and conservation implications in... 73 doi: 10.3897/zookeys.817.29337 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Beta diversity patterns of fish and conservation implications in the Luoxiao Mountains, China Jiajun Qin1,*, Xiongjun Liu2,3,*, Yang Xu1, Xiaoping Wu1,2,3, Shan Ouyang1 1 School of Life Sciences, Nanchang University, Nanchang 330031, China 2 Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, School of Environmental and Chemical Engi- neering, Nanchang University, Nanchang 330031, China 3 School of Resource, Environment and Chemical Engineering, Nanchang University, Nanchang 330031, China Corresponding author: Shan Ouyang ([email protected]); Xiaoping Wu ([email protected]) Academic editor: M.E. Bichuette | Received 27 August 2018 | Accepted 20 December 2018 | Published 15 January 2019 http://zoobank.org/9691CDA3-F24B-4CE6-BBE9-88195385A2E3 Citation: Qin J, Liu X, Xu Y, Wu X, Ouyang S (2019) Beta diversity patterns of fish and conservation implications in the Luoxiao Mountains, China. ZooKeys 817: 73–93. https://doi.org/10.3897/zookeys.817.29337 Abstract The Luoxiao Mountains play an important role in maintaining and supplementing the fish diversity of the Yangtze River Basin, which is also a biodiversity hotspot in China. However, fish biodiversity has declined rapidly in this area as the result of human activities and the consequent environmental changes. Beta diversity was a key concept for understanding the ecosystem function and biodiversity conservation. Beta diversity patterns are evaluated and important information provided for protection and management of fish biodiversity in the Luoxiao Mountains. -
Coreius Guichenoti
www.nature.com/scientificreports OPEN Alterations of the gut microbiome of largemouth bronze gudgeon (Coreius guichenoti) suffering from Received: 25 January 2016 Accepted: 07 July 2016 furunculosis Published: 28 July 2016 Tongtong Li1,2,*, Meng Long1,*, Cheng Ji3, Zhixin Shen4, François-Joël Gatesoupe5, Xujie Zhang1, Qianqian Zhang1, Lanli Zhang1, Yuanli Zhao1, Xinhua Liu1 & Aihua Li1 High-throughput sequencing was applied to compare the intestinal microbiota in largemouth bronze gudgeon either healthy or affected by furunculosis. Proteobacteria, Actinobacteria, Tenericutes, Firmicutes and Bacteroidetes were detected as the predominant bacterial phyla in the gut of both diseased and healthy fish. The abundance of Proteobacteria differed significantly between the two groups of fish, mainly due to the overwhelming prevalence ofAeromonas in the diseased fish (81% ± 17%), while the genus was unevenly spread among the apparently healthy fish (33% ± 33%). The bacterial diversity in the intestine of diseased fish was markedly lower than in healthy fish. Analysis revealed the significant dissimilarity between the gut microbiota of diseased and healthy fish. The bacterial profiles in the gut were further characterized with the 28 phylotypes that were shared by the two groups. In diseased fish, two shared OTUs (OTU0001 and OTU0013) were closely related to Aeromonas salmonicida, their total proportion exceeding 70% of the sequences in diseased fish, while averaging 5.2% ± 4.6% in the healthy fish. This result suggested the presence of healthy carriers of pathogenic A. salmonicida among the farmed fish, and the gut appeared as a probable infection source for furunculosis in largemouth bronze gudgeon. Gut microbiota can play important roles in nutrition and health, and it may be considered as an integral com- ponent of the host1–4. -
Family-Cyprinidae-Gobioninae-PDF
SUBFAMILY Gobioninae Bleeker, 1863 - gudgeons [=Gobiones, Gobiobotinae, Armatogobionina, Sarcochilichthyna, Pseudogobioninae] GENUS Abbottina Jordan & Fowler, 1903 - gudgeons, abbottinas [=Pseudogobiops] Species Abbottina binhi Nguyen, in Nguyen & Ngo, 2001 - Cao Bang abbottina Species Abbottina liaoningensis Qin, in Lui & Qin et al., 1987 - Yingkou abbottina Species Abbottina obtusirostris (Wu & Wang, 1931) - Chengtu abbottina Species Abbottina rivularis (Basilewsky, 1855) - North Chinese abbottina [=lalinensis, psegma, sinensis] GENUS Acanthogobio Herzenstein, 1892 - gudgeons Species Acanthogobio guentheri Herzenstein, 1892 - Sinin gudgeon GENUS Belligobio Jordan & Hubbs, 1925 - gudgeons [=Hemibarboides] Species Belligobio nummifer (Boulenger, 1901) - Ningpo gudgeon [=tientaiensis] Species Belligobio pengxianensis Luo et al., 1977 - Sichuan gudgeon GENUS Biwia Jordan & Fowler, 1903 - gudgeons, biwas Species Biwia springeri (Banarescu & Nalbant, 1973) - Springer's gudgeon Species Biwia tama Oshima, 1957 - tama gudgeon Species Biwia yodoensis Kawase & Hosoya, 2010 - Yodo gudgeon Species Biwia zezera (Ishikawa, 1895) - Biwa gudgeon GENUS Coreius Jordan & Starks, 1905 - gudgeons [=Coripareius] Species Coreius cetopsis (Kner, 1867) - cetopsis gudgeon Species Coreius guichenoti (Sauvage & Dabry de Thiersant, 1874) - largemouth bronze gudgeon [=platygnathus, zeni] Species Coreius heterodon (Bleeker, 1865) - bronze gudgeon [=rathbuni, styani] Species Coreius septentrionalis (Nichols, 1925) - Chinese bronze gudgeon [=longibarbus] GENUS Coreoleuciscus -
De Novo Assembly of Schizothorax Waltoni Transcriptome to Identify Immune-Related Genes Cite This: RSC Adv.,2018,8, 13945 and Microsatellite Markers†
RSC Advances View Article Online PAPER View Journal | View Issue De novo assembly of Schizothorax waltoni transcriptome to identify immune-related genes Cite this: RSC Adv.,2018,8, 13945 and microsatellite markers† Hua Ye,ab Zhengshi Zhang,ab Chaowei Zhou,ab Chengke Zhu,ab Yuejing Yang,ab Mengbin Xiang,ab Xinghua Zhou,ab Jian Zhou*c and Hui Luo *ab Schizothorax waltoni (S. waltoni) is one kind of the subfamily Schizothoracinae and an indigenous economic tetraploid fish to Tibet in China. It is rated as a vulnerable species in the Red List of China's Vertebrates, owing to overexploitation and biological invasion. S. waltoni plays an important role in ecology and local fishery economy, but little information is known about genetic diversity, local adaptation, immune system and so on. Functional gene identification and molecular marker development are the first and essential step for the following biological function and genetics studies. For this purpose, the transcriptome from pooled tissues of three adult S. waltoni was sequenced and Creative Commons Attribution-NonCommercial 3.0 Unported Licence. analyzed. Using paired-end reads from the Illumina Hiseq4000 platform, 83 103 transcripts with an N50 length of 2337 bp were assembled, which could be further clustered into 66 975 unigenes with an N50 length of 2087 bp. The majority of the unigenes (58 934, 87.99%) were successfully annotated by 7 public databases, and 15 KEGG pathways of immune-related genes were identified for the following functional research. Furthermore, 19 497 putative simple sequence repeats (SSRs) of 1–6 bp unit length were detected from 14 690 unigenes (21.93%) with an average distribution density of 1 : 3.28 kb. -
Phylogenetic Position of the Fish Genus Ellopostoma (Teleostei: Cypriniformes) Using Molecular Genetic Data
157 Ichthyol. Explor. Freshwaters, Vol. 20, No. 2, pp. 157-162, 2 figs., June 2009 © 2009 by Verlag Dr. Friedrich Pfeil, München, Germany – ISSN 0936-9902 Phylogenetic position of the fish genus Ellopostoma (Teleostei: Cypriniformes) using molecular genetic data Jörg Bohlen* and Vendula Šlechtová* We investigated the phylogenetic position of Ellopostoma based on nuclear sequence data (RAG-1 gene). Ellopo- stoma is a member of the superfamily Cobitoidea (loaches) of Cypriniformes, but does not belong to any of the currently recognised families. It represents an independent lineage, recognised as a distinct new family Ellopo- stomatidae, characterized by a squarish and oblique snout, a minute protrusible mouth, a single pair of barbels, large eyes and 35-38 pharyngeal teeth. Introduction middle stretches of the Kapuas River in western Borneo. It is only in 1976 that the species was With about 3800 recognised species, the freshwa- collected again, also in the Kapuas (Roberts, 1989). ter fish order Cypriniformes (Osteichthyes: Tele- Kottelat (1989) recorded the presence of an un- ostei) is one of the largest recognised to date named Ellopostoma from the Malay Peninsula among vertebrates. It is divided into two main [Tapi River, Thailand], later described by Tan & lineages, the superfamilies Cyprinoidea (carps, Lim (2002) as E. mystax. Kottelat & Widjanarti minnows and related fishes) and Cobitoidea (2005) provide additional records of E. megalo- (loaches and related fishes) (Nelson, 2006). With- mycter, also in the Kapuas drainage. in Cobitoidea seven lineages are recognizable Because of its unique morphological features, (called families by e. g., Šlechtová et al., 2007; Chen the phylogenetic position of Ellopostoma has been & Mayden, 2009). -
Diet of Leptobotia Elongata Revealed by Stomach Content Analysis and Inferred from Stable Isotope Signatures
Environ Biol Fish (2015) 98:1965–1978 DOI 10.1007/s10641-015-0414-4 Diet of Leptobotia elongata revealed by stomach content analysis and inferred from stable isotope signatures L. Li & Q. Wei Wei & J. Ming Wu & H. Zhang & Y. Liu & X. Xie Received: 4 July 2014 /Accepted: 16 April 2015 /Published online: 8 May 2015 # Springer Science+Business Media Dordrecht 2015 Abstract The diet of Leptobotia elongata in the Yibin shift to piscivory at c.110 mm standard length was found reach of the Yangtze River, China was investigated by using the stable isotope mixing model to reveal dietary stomach content analysis and by stable isotope analysis ontogeny by IsoSource software, and the trend in varia- from muscle. The results of the two methods were agree- tion of the δ13Candδ15N was similar with increased ment. Both stomach contents and isotope analysis indi- body length, and the plankton is important prey item in cated that L. elongata fedinspringmainlyonplankton, all size classes. The δ13Candδ15Nvaluesinsimilar shrimp and fish, and secondarily on benthic invertebrates sized individuals showed significant seasonal differences and aquatic insect larvae. For the stomach content anal- (δ13C, ANOVA, F=76.33,p<0.001 and δ15N, ANOVA, ysis, the diet composition showed significant differences F=144.56, p<0.001), indicating a temporal dietary and among the size classes in relative weight of prey items, trophic level shift. L. elongata is an important commer- with L. elongata changing feeding habits at c.110 mm cial species, and the results of the study form part of a standard length. The smaller individuals fed on benthic detailed investigation of feeding ecology of L. -
Evolution and Phylogenetic Application of the MC1R Gene in the Cobitoidea (Teleostei: Cypriniformes)
ZOOLOGICAL RESEARCH Evolution and phylogenetic application of the MC1R gene in the Cobitoidea (Teleostei: Cypriniformes) Qiong-Ying TANG1,*, Li-Xia SHI1,2, Fei LIU1, Dan YU1, Huan-Zhang LIU1,* 1 The Key Laboratory of Aquatic Biodiversity and Conservation of Chinese Academy of Sciences, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China 2 University of Chinese Academy of Sciences, Beijing 100049, China ABSTRACT INTRODUCTION Fish of the superfamily Cobitoidea sensu stricto (namely loaches) exhibit extremely high diversity of The superfamily Cobitoidea is a group of small- to medium- color patterns, but so far little is known about their sized benthic fish, composed of approximately 28% of species evolutionary mechanism. Melanocortin 1 receptor of the order Cypriniformes, which is the largest group of gene (MC1R) plays an important role during the freshwater fish in the world (Nelson et al., 2016). Depending on synthesis of melanin and formation of animal body different authors, Cobitoidea includes variable families. Bohlen color patterns. In this study, we amplified and sequenced the partial MC1R gene for 44 loach & Šlechtová (2009) and Chen et al. (2009) congruently individuals representing 31 species of four families. recognized the genus Ellopostoma as a distinct new family Phylogenetic analyses yielded a topology congruent Ellopostomatidae, and proposed that Cobitoidea is composed with previous studies using multiple nuclear loci, of eight families (Catostomidae, Gyrinocheilidae, Botiidae, showing that each of the four families was Vaillantellidae, Cobitidae, Ellopostomatidae, Nemacheilidae and monophyletic with sister relationships of Botiidae+ Balitoridae). Kottelat (2012) raised genera Serpenticobitis and (Cobitidae+(Balitoridae+Nemacheilidae)). Gene Barbucca to family rank, and established Serpenticobitidae and evolutionary analyses indicated that MC1R in Barbuccidae. -
Diversity and Risk Patterns of Freshwater Megafauna: a Global Perspective
Diversity and risk patterns of freshwater megafauna: A global perspective Inaugural-Dissertation to obtain the academic degree Doctor of Philosophy (Ph.D.) in River Science Submitted to the Department of Biology, Chemistry and Pharmacy of Freie Universität Berlin By FENGZHI HE 2019 This thesis work was conducted between October 2015 and April 2019, under the supervision of Dr. Sonja C. Jähnig (Leibniz-Institute of Freshwater Ecology and Inland Fisheries), Jun.-Prof. Dr. Christiane Zarfl (Eberhard Karls Universität Tübingen), Dr. Alex Henshaw (Queen Mary University of London) and Prof. Dr. Klement Tockner (Freie Universität Berlin and Leibniz-Institute of Freshwater Ecology and Inland Fisheries). The work was carried out at Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Germany, Freie Universität Berlin, Germany and Queen Mary University of London, UK. 1st Reviewer: Dr. Sonja C. Jähnig 2nd Reviewer: Prof. Dr. Klement Tockner Date of defense: 27.06. 2019 The SMART Joint Doctorate Programme Research for this thesis was conducted with the support of the Erasmus Mundus Programme, within the framework of the Erasmus Mundus Joint Doctorate (EMJD) SMART (Science for MAnagement of Rivers and their Tidal systems). EMJDs aim to foster cooperation between higher education institutions and academic staff in Europe and third countries with a view to creating centres of excellence and providing a highly skilled 21st century workforce enabled to lead social, cultural and economic developments. All EMJDs involve mandatory mobility between the universities in the consortia and lead to the award of recognised joint, double or multiple degrees. The SMART programme represents a collaboration among the University of Trento, Queen Mary University of London and Freie Universität Berlin. -
Teleostei: Cypriniformes: Cyprinidae) Inferred from Complete Mitochondrial Genomes
Biochemical Systematics and Ecology 64 (2016) 6e13 Contents lists available at ScienceDirect Biochemical Systematics and Ecology journal homepage: www.elsevier.com/locate/biochemsyseco Molecular phylogeny of the subfamily Schizothoracinae (Teleostei: Cypriniformes: Cyprinidae) inferred from complete mitochondrial genomes * Jie Zhang a, b, Zhuo Chen a, Chuanjiang Zhou b, Xianghui Kong b, a College of Life Science, Henan Normal University, Xinxiang 453007, PR China b College of Fisheries, Henan Normal University, Xinxiang 453007, PR China article info abstract Article history: The schizothoracine fishes, members of the Teleost order Cypriniformes, are one of the Received 16 June 2015 most diverse group of cyprinids in the QinghaieTibetan Plateau and surrounding regions. Received in revised form 19 October 2015 However, taxonomy and phylogeny of these species remain unclear. In this study, we Accepted 14 November 2015 determined the complete mitochondrial genome of Schizopygopsis malacanthus. We also Available online xxx used the newly obtained sequence, together with 31 published schizothoracine mito- chondrial genomes that represent eight schizothoracine genera and six outgroup taxa to Keywords: reconstruct the phylogenetic relationships of the subfamily Schizothoracinae by different Mitochondrial genome Phylogeny partitioned maximum likelihood and partitioned Bayesian inference at nucleotide and fi Schizothoracinae amino acid levels. The schizothoracine shes sampled form a strongly supported mono- Schizopygopsis malacanthus phyletic group that is the sister taxon to Barbus barbus. A sister group relationship between the primitive schizothoracine group and the specialized schizothoracine group þ the highly specialized schizothoracine group was supported. Moreover, members of the specialized schizothoracine group and the genera Schizothorax, Schizopygopsis, and Gym- nocypris were found to be paraphyletic. © 2015 Published by Elsevier Ltd.