The Non-Native Copepod Oithona Davisae (Ferrari FD and Orsi, 1984)
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New Insights Into Global Biogeography, Population Structure and Natural Selection from the Genome of the Epipelagic Copepod Oithona
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/317819489 New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona Article in Molecular Ecology · June 2017 DOI: 10.1111/mec.14214 CITATIONS READS 5 296 12 authors, including: Mohammed-Amin Madoui Julie Poulain Genoscope - Centre National de Séquençage Atomic Energy and Alternative Energies Commission 30 PUBLICATIONS 543 CITATIONS 352 PUBLICATIONS 17,316 CITATIONS SEE PROFILE SEE PROFILE Kevin Sugier Benjamin Noel Genoscope - Centre National de Séquençage CEA-Institut de Génomique 2 PUBLICATIONS 5 CITATIONS 67 PUBLICATIONS 5,688 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Caracterization of new viruses from Arthropods View project TARA Expeditions : http://oceans.taraexpeditions.org/en/m/science/goals/ View project All content following this page was uploaded by Mohammed-Amin Madoui on 26 July 2017. The user has requested enhancement of the downloaded file. Received: 22 January 2017 | Revised: 22 March 2017 | Accepted: 24 May 2017 DOI: 10.1111/mec.14214 ORIGINAL ARTICLE New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona Mohammed-Amin Madoui1,2,3 | Julie Poulain1 | Kevin Sugier1,2,3 | Marc Wessner1 | Benjamin Noel1 | Leo Berline4 | Karine Labadie1 | Astrid Cornils5 | Leocadio Blanco-Bercial6 | Lars Stemmann7 -
Invert3 2 115 135 Abiahy at All.PM6
Invertebrate Zoology, 2006, 3(2): 115-135 INVERTEBRATE ZOOLOGY, 2006 published online 06.01.2007 accepted for publication 21.11.2006 Redescription of Limnoithona tetraspina Zhang et Li, 1976 (Copepoda, Cyclopoida) with a discussion of character states shared with the Oithonidae and older cyclopoids Bernardo Barroso do Abiahy\ Carlos Eduardo Falavigna da Rocha^, Frank D. Ferrari^ ' Avenida Manuel Hipolito do Rego 1270/ap. 09, 11.600-000 Sao Sebastiao, SP, Brasd ^ Universidade de Sao Paulo, Instituto de Biociencias, Departamento de Zoologia, Rua do Matdo, travessa 14, No. 321, 05508-900 Sao Paulo, Brazd 'Department of Invertebrate Zoology, MRC-534, National Museum of Natural History, Smithso- nian Institution, 4210 Silver Hill Rd., Suitland, MD 20746 U.S.A. ABSTRACT: Limnoithona tetraspina Zhang et Li, 1976 is redescribed, and the morpho- logy of the cephalosome, rostral area, oral appendages, legs 1-6 andurosome of adult males and females is illustrated. Morphological features separating L. tetraspina from its only congener,Z.5/«e«5;5, include: a more pronounced rostrum; 1 seta more on the proximal lobe of the basis of the maxillule; 1 seta more on the endopod of the maxillule; middle endopodal segment of swimming legs 2-A with 1 seta more; proximal and distal seta of the middle endopodal segment of swimming leg 4 with a flange; exopod of leg 5 with a proximal lateral seta; male cephalosome ventrally with pores with cilia. A rounded projection between labrum and rostrum is a shared derived state for both species of Limnoithona. Derived morphological features of the remaining species of Oithonidae, which are not shared with L. -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology .......... -
Oithona Baird, 1843
# 188 MAY 2019 Oithona Baird, 1843 ICES IDENTIFICATION LEAFLETS FOR PLANKTON ICES INTERNATIONAL COUNCIL FOR THE EXPLORATION OF THE SEA CIEM CONSEIL INTERNATIONAL POUR L’EXPLORATION DE LA MER ICES IDENTIFICATION LEAFLETS FOR PLANKTON NO. 188 MAY 2019 Oithona Baird, 1843 Maria Grazia Mazzocchi International Council for the Exploration of the Sea Conseil International pour l’Exploration de la Mer H. C. Andersens Boulevard 44–46 DK-1553 Copenhagen V Denmark Telephone (+45) 33 38 67 00 Telefax (+45) 33 93 42 15 www.ices.dk [email protected] Recommended format for purposes of citation: Mazzocchi, M. G. 2019. Oithona Baird, 1843. ICES Identification Leaflets for Plankton. No. 188, pp. 16. http://doi.org/10.17895/ices.pub.5254 Series Editors: Antonina dos Santos and Lidia Yebra. Prepared under the auspices of the ICES Working Group on Zooplankton Ecology. The material in this report may be reused for non-commercial purposes using the recommended citation. ICES may only grant usage rights of information, data, images, graphs, etc. of which it has ownership. For other third-party material cited in this report, you must contact the original copyright holder for permission. For citation of datasets or use of data to be included in other databases, please refer to the latest ICES data policy on the ICES website. All extracts must be acknowledged. For other reproduction requests please contact the General Secretary. Cover image: Inês M. Dias and Lígia F. de Sousa for ICES ID Plankton Leaflets. ISBN 978-87-7482-233-2 ISSN 0109–2510 © 2019 International Council for the Exploration of the Sea Oithona Baird, 1843 | 1 Contents 1 Abstract ........................................................................................................................... -
Vertical Structure of Small Metazoan Plankton, Especially Non-Calanoid Copepods. II. Deep Eastern Mediterranean (Levantine Sea)
OCEANOLOGICA ACTA- VOL. 20- W 2 ~ ----~ Mctazoan Vertical structure of small Non-calanoid copepod Oncaea metazoan plankton, especially Levantine sea Métazoaire Copépode non-calanoïde non-calanoid copepods. Oncaea Mer Levantine II. Deep Eastern Mediterranean (Levantine Sea) Ruth BÔTTGER-SCHNACK Institut für Meereskunde an der Universitat Kiel, Düsternbrooker Wcg 20, D-24105 Kiel, Germany. · Received 11/07/95, in revised fnrm 19/12/95, accepted 18/01/96. ABSTRACT The abundance and vertical distribution of micrometazoans sampled with fine nets of 0.05 mm mesh size were studied in different regions of the Eastern Medi terranean Sea down to a maximum depth of 1850 m. Significant east-west diffe rences in biomass, total metazoan abundance and/or species composition of non-calanoid copepods were not recorded. The vertical gradient for total plank ton biomass and abundance of major taxa was more or Jess consistent, showing no secondary maximum at intermediate watcr layers. The copepods were domi nated by poecilostomatoids (genus Oncaea) which accountcd for about 50% of total copepod numbers in the water column. The greatest relative abundance of poecilostomatoids ( up to 80 %) was found in the mesopelagic zone, at 100 rn to 1050 m. In the epipelagic zone, calanoids were most numerous, however. In the bathypelagic zone below 1050 rn depth, harpacticoids (Microsetella spp.) were next in abundance to poecilostomatoids. More than 56 non-calanoid specics were recovered of which 28 belonged to the genus Oncaea. Dominant Oncaea species in the epi- and upper mesopelagic zone were O. zernovi, O. ivlevi and Oncaea sp. K. Below 450 rn and down to the deepest stratum sampled Oncaea longipes and Oncaea sp. -
New Mediterranean Biodiversity Records (December 2019)
Collective Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net DOI: http://dx.doi.org/10.12681/mms.20913 New Mediterranean Biodiversity Records (December 2019) Branko DRAGIČEVIĆ1, Olga ANADOLI2, Dror ANGEL3, Mouloud BENABDI4, Ghazi BITAR5, Luca CASTRIOTA6, Fabio CROCETTA7, Alan DEIDUN8, Jakov DULČIĆ1, Dor EDELIST3,9, Vasilis GEROVASILEIOU10, Salvatore GIACOBBE11, Alenka GORUPPI 12, Tamar GUY-HAIM13, Evangelos KONSTANTINIDIS14, Zafrir KUPLIK3,15, Joachim LANGENECK16, Armando MACALI17, Ioannis MANITARAS18, Nikolas MICHAILIDIS18,19, Evangelia MICHALOUDI2, Panayotis OVALIS20, Costas PERDIKARIS14, Roberto PILLON21, Stefano PIRAINO22, Walter RENDA23, Jamila RIZGALLA24, Andrea SPINELLI25, Jonathan TEMPESTI16, Francesco TIRALONGO21, Valentina TIRELLI12, Konstantinos TSIAMIS26, Cemal TURAN27, Necdet UYGUR27, Bruno ZAVA28 and Argyro ZENETOS29 1 Institute of Oceanography and Fisheries, Šetalište Ivana Meštrovića 63, 21000 Split, Croatia 2 Department of Zoology, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece 3 Leon Recanati Institute for Maritime Studies and the Department of Maritime Civilizations, Leon H. Charney School of Marine Science, University of Haifa, Israel 4 Laboratory of Environmental Monitoring Network, Faculty of SNV, Oran1 University, Oran, Algeria 5 Lebanese University, Faculty of Sciences, Hadath, Beirut, Lebanon 6 Institute for Environmental Protection and Research, ISPRA, Lungomare Cristoforo -
Major Patterns of Body Size Variation Within Arthropod Species: Exploring the Impact of Habitat, Temperature, Latitude, Seasonality and Altitude
Major Patterns of Body Size Variation within Arthropod Species: Exploring the Impact of Habitat, Temperature, Latitude, Seasonality and Altitude Submitted in partial fulfilment of the requirements of the Degree of Doctor of Philosophy Curtis Robert Horne June 2017 I, Curtis Robert Horne, confirm that the research included within this thesis is my own work or that where it has been carried out in collaboration with, or supported by others, that this is duly acknowledged below and my contribution indicated. Previously published material is also acknowledged below. I attest that I have exercised reasonable care to ensure that the work is original, and does not to the best of my knowledge break any UK law, infringe any third party’s copyright or other Intellectual Property Right, or contain any confidential material. I accept that the College has the right to use plagiarism detection software to check the electronic version of the thesis. I confirm that this thesis has not been previously submitted for the award of a degree by this or any other university. The copyright of this thesis rests with the author and no quotation from it or information derived from it may be published without the prior written consent of the author. Signature: Date: 2nd June 2017 i Details of collaboration and publications Author contributions and additional collaborators are listed below for each chapter, as well as details of publications where applicable. This work was supported by the Natural Environment Research Council (NE/L501797/1). I use the term ‘we’ throughout the thesis to acknowledge the contribution of others. -
Nauplius Short Communication the Journal of the First Record of Oithona Attenuata Farran, Brazilian Crustacean Society 1913 (Crustacea: Copepoda) from Brazil
Nauplius SHORT COMMUNICATION THE JOURNAL OF THE First record of Oithona attenuata Farran, BRAZILIAN CRUSTACEAN SOCIETY 1913 (Crustacea: Copepoda) from Brazil 1 e-ISSN 2358-2936 Judson da Cruz Lopes da Rosa orcid.org/0000-0001-7635-8736 www.scielo.br/nau 2 orcid.org/0000-0002-1228-2805 www.crustacea.org.br Wanda Maria Monteiro-Ribas 3 Lucas Lemos Batista orcid.org/0000-0003-2389-7132 Lohengrin Dias de Almeida Fernandes2 orcid.org/0000-0002-8579-2363 1 Programa de Pós-Graduação em Ciências Ambientais e Conservação, Laboratório Integrado de Zoologia na Universidade Federal do Rio de Janeiro. Macaé, Rio de Janeiro, Brasil. 2 Instituto de Estudos do Mar Almirante Paulo Moreira, Departamento de Oceanografia, Divisão de Ecossistemas Marinhos. Arraial do Cabo, Rio de Janeiro, Brasil. 3 Instituto de Biodiversidade e Sustentabilidade (NUPEM/UFRJ), Laboratório Integrado de Zoologia na Universidade Federal do Rio de Janeiro. Macaé, Rio de Janeiro, Brasil. ZOOBANK: http://zoobank.org/urn:lsid:zoobank.org:pub:5761ED4C-A9E3-4A61- AB50-6537E7F192C1 ABSTRACT Here, we report the first record of the marine copepodOithona attenuata Farran, 1913, in Brazil, from a costal station near Cabo Frio Island, Arraial do Cabo Municipality, Rio de Janeiro State. Specimens were found during March and May 2011 in zooplankton samples obtained from horizontal hauls using a plankton-net with a 100μm mesh size, and mouth opening of 40 cm diameter. KEYWORDS Arraial do Cabo, Cyclopoida, geographic distribution, microcrustaceans, zooplankton The order Cyclopoida consists of 44 families of mostly holoplanktonic species (Boxshall and Halsey, 2004), of which numerous members have been shown to be good indicators of the physical-chemical characteristics of water CORRESPONDING AUTHOR (Boltovskoy, 1981; Nishida, 1985; Dias and Araujo, 2006). -
Oithona Similis (Copepoda: Cyclopoida) - a Cosmopolitan Species?
OITHONA SIMILIS (COPEPODA: CYCLOPOIDA) - A COSMOPOLITAN SPECIES? DISSERTATION Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften -Dr. rer. nat- Am Fachbereich Biologie/Chemie der Universität Bremen BRITTA WEND-HECKMANN Februar 2013 1. Gutachter: PD. Dr. B. Niehoff 2. Gutachter: Prof. Dr. M. Boersma Für meinen Vater Table of contents Summary 3 Zusammenfassung 6 1. Introduction 9 1.1 Cosmopolitan and Cryptic Species 9 1.2 General introduction to the Copepoda 12 1.3 Introduction to the genus Oithona 15 1.4 Feeding and role of Oithona spp in the food web 15 1.5 Geographic and vertical distribution of Oithona similis 16 1.6. Morphology 19 1.6.1 General Morphology of the Subclass Copepoda 19 1.6.1.1 Explanations and Abbrevations 31 1.6.2 Order Cyclopoida 33 1.6.2.1 Family Oithonidae Dana 1853 35 1.6.2.2 Subfamily Oithoninae 36 1.6.2.3 Genus Oithona Baird 1843 37 1.7 DNA Barcoding 42 2. Aims of the thesis (Hypothesis) 44 3. Material and Methods 45 3.1. Investigation areas and sampling 45 3.1.1 The Arctic Ocean 46 3.1.2 The Southern Ocean 50 3.1.3 The North Sea 55 3.1.4 The Mediterranean Sea 59 3.1.5 Sampling 62 3.1.6 Preparation of the samples 62 3.2 Morphological studies and literature research 63 3.3 Genetic examinations 71 3.4 Sequencing 73 4 Results 74 4.1 Morphology of Oithona similis 74 4.1.1 Literature research 74 4.1.2 Personal observations 87 4.2. -
Farran, 1913) in a Mediterranean Coastal Ecosystem
Turkish Journal of Zoology Turk J Zool (2018) 42: 567-577 http://journals.tubitak.gov.tr/zoology/ © TÜBİTAK Research Article doi:10.3906/zoo-1802-42 Contribution and acclimatization of the swarming tropical copepod Dioithona oculata (Farran, 1913) in a Mediterranean coastal ecosystem Tuba TERBIYIK KURT Department of Marine Biology, Faculty of Fisheries, Çukurova University, Adana, Turkey Received: 26.02.2018 Accepted/Published Online: 02.07.2018 Final Version: 17.09.2018 Abstract: In this study, tropical oithonid copepod Dioithona oculata was recorded for the first time in the Mediterranean Sea. This species is distinguished easily by its large ocular lenses and by the number of setae on the endopod of the maxillule. The study was conducted seasonally in the coastal area of İskenderun Bay between April 2013 and December 2016. D. oculata was first observed in October 2013 in the study area (Station 4; 3.1 ind. m–3); after this period, this species became an important contributor to zooplankton assemblages in October with the highest level seen in 2016 (Station 4, 834.5 ind. m–3). The proportion of this species in the copepod community varied from 0.14% (2014) to 29.4% (2016), and the highest proportions, observed in October 2016, were at Stations 3 and 4 (51.1% and 65.3%, respectively). Females dominated the D. oculata population and the ratio of female to male was 5.6 ± 7 on average. Copepodit stages were also observed in the population. Altogether, these data indicate that the D. oculata population increased year after year. In addition, the presence of copepodits in the population suggests that this species was established and successfully acclimatized to the conditions, becoming an important component of the zooplankton community in the İskenderun Bay ecosystem. -
Proceedings of the United States National Museum
Proceedings of the United States National Museum SMITHSONIAN INSTITUTION • WASHINGTON, B.C. Volume 117 1965 Number 3513 PLANKTONIC COPEPODS FROM BAHIA FOSFORESCENTE, PUERTO RICO, AND ADJACENT WATERS By Juan G. Gonzalez and Thomas E. Bowman* Beginning in the fall of 1957, an investigation of the plankton along the southwestern coast of Puerto Rico, from Bahia Montalva on the east to Posa de Don Eulalio on the west, was carried out by Dr. Robert E. Coker and Juan G. Gonzdlez. A map of the area showing the stations at which plankton samples were collected routinely for 2 years is given in figure 1. A description of the region, together with an account of the methods of collection and an analysis of the climatic and hydrographic conditions, is given by Coker and Gonzdlez (1960) in their ecological study of the copepod populations. The present paper is a taxonomic treatment of the planktonic copepods and is hmited to the species that occur regularly in the bays and the inner ' Gonzalez: Institute of Marine Biology, University of Puerto Rico, Mayagiiez; Bowman: Associate Curator, Division of Crustacea, Smithsonian Institution. 241 : 242 PROCEEDINGS OF THE NATIONAL MUSEUM vol. 117 part of the shelf. Offshore species that occasionally are carried into the inner shelf and bays are not included. In the descriptions that follow we use the terms employed by Gooding (1957) for regions of the copepod body and the following abbreviations A1-A2 : PUERTO RICAN COPEPODS—GONZALEZ AND BOWMAN 243 the new family Calocalanidae. Only 2 genera remain in the Para- -
Motility of Copepod Nauplii and Implications for Food Encounter
MARINE ECOLOGY PROGRESS SERIES Vol. 247: 123–135, 2003 Published February 4 Mar Ecol Prog Ser Motility of copepod nauplii and implications for food encounter Josefin Titelman1, 2, 3,*, Thomas Kiørboe1 1Danish Institute for Fisheries Research, Department of Marine Ecology and Aquaculture, Kavalergården 6, 2920 Charlottenlund, Denmark 2Göteborg University, Department of Marine Ecology, Kristineberg Marine Research Station, 450 34 Fiskebäckskil, Sweden 3Present address: Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, United Kingdom ABSTRACT: Velocity differences drive all encounter processes. Therefore, knowledge of both prey and predator motility are essential in order to understand feeding behavior and predict food acquisi- tion rates. Here, we describe and quantify the motility behavior of young and old naupliar stages of 6 copepods (Centropages typicus, Calanus helgolandicus, Temora longicornis, Acartia tonsa, Eury- temora affinis and Euterpina acutifrons). Behaviors of individual nauplii were divided into sequences of sinking, swimming and jumping events. Motility behavior is both stage- and species-specific in terms of appearance of tracks, speeds, durations and frequencies of events as well as time budgets. Motility mode often changes drastically during naupliar ontogeny. Crudely, nauplii can be divided into those moving with a jump-sink type of motility of various frequencies (1 min–1 to 3 s–1) and those swimming with a smoother glide of varying continuity. We apply observed time budgets and behav- ior-specific speeds in simple models to examine mechanisms of food encounter. The motility of all nauplii may account for clearance rates reported in the literature, but through different mechanisms. Smoothly swimming nauplii encounter food by scavenging, which also allows for some food capture inefficiency.