The Concise Guide to Pharmacology 2019/20: Nuclear Hormone Receptors
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Alpha Actinin 4: an Intergral Component of Transcriptional
ALPHA ACTININ 4: AN INTERGRAL COMPONENT OF TRANSCRIPTIONAL PROGRAM REGULATED BY NUCLEAR HORMONE RECEPTORS By SIMRAN KHURANA Submitted in partial fulfillment of the requirements for the degree of doctor of philosophy Thesis Advisor: Dr. Hung-Ying Kao Department of Biochemistry CASE WESTERN RESERVE UNIVERSITY August, 2011 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the thesis/dissertation of SIMRAN KHURANA ______________________________________________________ PhD candidate for the ________________________________degree *. Dr. David Samols (signed)_______________________________________________ (chair of the committee) Dr. Hung-Ying Kao ________________________________________________ Dr. Edward Stavnezer ________________________________________________ Dr. Leslie Bruggeman ________________________________________________ Dr. Colleen Croniger ________________________________________________ ________________________________________________ May 2011 (date) _______________________ *We also certify that written approval has been obtained for any proprietary material contained therein. TABLE OF CONTENTS LIST OF TABLES vii LIST OF FIGURES viii ACKNOWLEDEMENTS xii LIST OF ABBREVIATIONS xiii ABSTRACT 1 CHAPTER 1: INTRODUCTION Family of Nuclear Receptors 3 Mechanism of transcriptional regulation by co-repressors and co-activators 8 Importance of LXXLL motif of co-activators in NR mediated transcription 12 Cyclic recruitment of co-regulators on the target promoters 15 Actin and actin related proteins (ABPs) in transcription -
3398 Orphan Nuclear Receptor Function in the Ovary Huajun Zhao1, Zili
[Frontiers in Bioscience 12, 3398-3405, May 1, 2007] Orphan nuclear receptor function in the ovary Huajun Zhao1, Zili Li1, Austin J. Cooney2, Zi-Jian Lan1 1Birth Defects Center, Department of Molecular, Cellular and Craniofacial Biology, University of Louisville Health Sciences Center, Louisville, KY 40202 2Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030 TABLE OF CONTENTS 1. Abstract 2. Introduction 3. Germ Cell Nuclear Factor 4. Steroidogenic Factor-1 5. Liver Receptor Homolog-1 6. Perspective 7. Acknowledgement 8. References 1. ABSTRACT 2. INTRODUCTION Orphan nuclear receptors such as germ cell In the mammalian ovary, follicles are the nuclear factor (GCNF), steroidogenic factor 1 (SF-1) and principal functional units which provide the support system liver receptor homolog-1 (LRH-1), are emerging as necessary for production of female germ cells (mature important ovarian factors in regulating female oocytes) during postnatal life (1). The process of follicular reproduction. Within the ovary, GCNF (NR6A1) development after birth is termed folliculogenesis and the expression is restricted to the oocyte, while SF-1 (NR5A1) production of fertilizable eggs is referred to as oogenesis. is expressed only in the somatic cells, such as granulosa, During reproductive life, folliculogenesis and oogenesis are thecal and luteal cells, and interstitial cells. LRH-1 highly coordinated to ensure the production of fertilizable (NR5A2), an orphan receptor closely related to SF-1, is eggs. These processes require intercellular communication expressed only in the granulosa cells of the follicles and between many cell types such as oocytes, granulosa and luteal cells within the ovary. Recent studies using thecal cells within the ovary (2, 3). -
Role of Nuclear Receptors in Central Nervous System Development and Associated Diseases
Role of Nuclear Receptors in Central Nervous System Development and Associated Diseases The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Olivares, Ana Maria, Oscar Andrés Moreno-Ramos, and Neena B. Haider. 2015. “Role of Nuclear Receptors in Central Nervous System Development and Associated Diseases.” Journal of Experimental Neuroscience 9 (Suppl 2): 93-121. doi:10.4137/JEN.S25480. http:// dx.doi.org/10.4137/JEN.S25480. Published Version doi:10.4137/JEN.S25480 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:27320246 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Journal name: Journal of Experimental Neuroscience Journal type: Review Year: 2015 Volume: 9(S2) Role of Nuclear Receptors in Central Nervous System Running head verso: Olivares et al Development and Associated Diseases Running head recto: Nuclear receptors development and associated diseases Supplementary Issue: Molecular and Cellular Mechanisms of Neurodegeneration Ana Maria Olivares1, Oscar Andrés Moreno-Ramos2 and Neena B. Haider1 1Department of Ophthalmology, Schepens Eye Research Institute, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA, USA. 2Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia. ABSTRACT: The nuclear hormone receptor (NHR) superfamily is composed of a wide range of receptors involved in a myriad of important biological processes, including development, growth, metabolism, and maintenance. -
Pharmacological Activation of Estrogen Receptors-Α and -Β Differentially Modulates Keratinocyte Differentiation with Functional Impact on Wound Healing
INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 37: 21-28, 2016 Pharmacological activation of estrogen receptors-α and -β differentially modulates keratinocyte differentiation with functional impact on wound healing VLASTA PERŽEĽOVÁ1,2*, FRANTIŠEK SABOL3*, TOMÁŠ VASILENKO4,5, MARTIN NOVOTNÝ5,6, IVAN KOVÁČ5,7, MARTIN SLEZÁK5, JÁN ĎURKÁČ5, MARTIN HOLLÝ5, MARTINA PILÁTOVÁ2, PAVOL SZABO8, LENKA VARINSKÁ1, ZUZANA ČRIEPOKOVÁ2, TOMÁŠ KUČERA9, HERBERT KALTNER10, SABINE ANDRÉ10, HANS-JOACHIM GABIUS10, PAVEL MUČAJI11, KAREL SMETANA Jr8 and PETER GÁL1,5,8,11 1Department of Pharmacology, Faculty of Medicine, Pavol Jozef Šafárik University; 2Department of Pathological Anatomy and Physiology, University of Veterinary Medicine and Pharmacy; 3Department of Heart Surgery, East-Slovak Institute of Cardiovascular Diseases and Pavol Jozef Šafárik University; 4Department of Surgery, Košice-Šaca Hospital and Pavol Jozef Šafárik University; 5Department for Biomedical Research, East-Slovak Institute of Cardiovascular Diseases; 6Department of Pathological Physiology, Faculty of Medicine, Pavol Jozef Šafárik University; 72nd Department of Surgery, Louis Pasteur University Hospital and Pavol Jozef Šarfárik University, Košice, Slovak Republic; Institutes of 8Anatomy and 9Histology and Embryology, First Faculty of Medicine, Charles University, Prague, Czech Republic; 10Institute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians-University Munich, Munich, Germany; 11Department of Pharmacognosy and Botany, Faculty of Pharmacy, Comenius University, -
Anti-Testicular Receptor 2 (TR2) (Rabbit) Antibody - 100-401-E45
Anti-Testicular Receptor 2 (TR2) (Rabbit) Antibody - 100-401-E45 Code: 100-401-E45 Size: 100 µL Product Description: Anti-Testicular Receptor 2 (TR2) (Rabbit) Antibody - 100-401-E45 Concentration: Titrated value sufficient to run approximately 10 mini blots. PhysicalState: Liquid Label Unconjugated Host Rabbit Gene Name NR2C1 Species Reactivity mouse, human, rat Storage Condition Store vial at -20° C prior to opening. This product is stable at 4° C as an undiluted liquid. For extended storage, aliquot contents and freeze at -20° C or below. Avoid cycles of freezing and thawing. Dilute only prior to immediate use. Synonyms Nuclear receptor subfamily 2 group C member 1, Orphan nuclear receptor TR2, mTR2 Application Note Anti-Testicular Receptor 2 (Rabbit) antibody is suitable for use in Western Blots. Anti-Testicular Receptor 2 antibodies are specific for the ~64 kDa TR2 protein in Western blots of testes and nuclear extracts from MEL cell lines. Researchers should determine optimal titers for applications that are not stated below. Background TR2 antibody detects Testicular receptor 2 (TR2), which is a member of the orphan nuclear receptor family. It is widely expressed at a low level throughout the adult testis. TR2 represses transcription and binds DNA directly interacting with HDAC3 and HDAC4 via DNA-binding domains. TR2 has also been implicated in regulation of estrogen receptor activity in mammary glands. In addition, TR2 has recently been shown to form a heterodimer with TR4 that can bind to the direct repeat 6 element of the hepatitis B virus (HBV) enhancer II region thus suppressing HBV gene expression. -
Estrogen Receptor Beta Is a Negative Regulator of Mammary Cell Proliferation Xiaozheng Song University of Vermont
University of Vermont ScholarWorks @ UVM Graduate College Dissertations and Theses Dissertations and Theses 2014 Estrogen Receptor Beta Is A Negative Regulator Of Mammary Cell Proliferation Xiaozheng Song University of Vermont Follow this and additional works at: https://scholarworks.uvm.edu/graddis Part of the Animal Sciences Commons, and the Molecular Biology Commons Recommended Citation Song, Xiaozheng, "Estrogen Receptor Beta Is A Negative Regulator Of Mammary Cell Proliferation" (2014). Graduate College Dissertations and Theses. 259. https://scholarworks.uvm.edu/graddis/259 This Dissertation is brought to you for free and open access by the Dissertations and Theses at ScholarWorks @ UVM. It has been accepted for inclusion in Graduate College Dissertations and Theses by an authorized administrator of ScholarWorks @ UVM. For more information, please contact [email protected]. ESTROGEN RECEPTOR BETA IS A NEGATIVE REGULATOR OF MAMMARY CELL PROLIFERATION A Dissertation Presented by Xiaozheng Song to The Faculty of the Graduate College of The University of Vermont In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Specializing in Animal Science October, 2014 Accepted by the Faculty of the Graduate College, The University of Vermont, in partial fulfillment of the requirements for the degree of Doctor of Philosophy, specializing in Animal Science. Dissertation Examination Committee: ____________________________________ Advisor Zhongzong Pan Ph.D. ____________________________________ Co-Advisor Andre-Denis Wright Ph.D. ____________________________________ Rona Delay, Ph.D. ____________________________________ David Kerr, Ph.D. ____________________________________ Chairperson Karen M. Lounsbury, Ph. D. ____________________________________ Dean, Graduate College Cynthia J. Forehand, Ph.D. Date: May 5, 2014 ABSTRACT The mammary gland cell growth and differentiation are under the control of both systemic hormones and locally produced growth factors. -
Modulation of Responses to Stress by Estradiol Benzoate and Selective Estrogen Receptor Agonists
253 Modulation of responses to stress by estradiol benzoate and selective estrogen receptor agonists Lidia I Serova, Heather A Harris1, Shreekrishna Maharjan and Esther L Sabban Department of Biochemistry and Molecular Biology, New York Medical College, Valhalla, New York 10595, USA 1Women’s Health and Musculoskeletal Biology, Wyeth Research, Collegeville, Pennsylvania 19426, USA (Correspondence should be addressed to E L Sabban; Email: [email protected]) Abstract Previously,pretreatment with estradiol benzoate (EB) was found IMO, indicating an ERa (ESR1)-, but not ERb (ESR2)-, to modulate the response of hypothalamic–pituitary–adrenal mediated mechanism. In the locus coeruleus (LC), the rise in (HPA) axis and gene expression in several catecholaminergic dopamine-b-hydroxylase (Dbh) mRNA with both stress neuronal locations in ovariectomized (OVX) rats exposed to paradigms was abrogated in EB- or PPT-injected animals. single immobilization stress (IMO). Here, we investigated the However, WAY-200070 blocked the response of DBH mRNA role of estrogen receptor (ER) subtypes, using selective agonists to single IMO but not to repeated IMO. In the nucleus of the for ERa (propyl pyrazole triol, PPT) or ERb (WAY-200070) in solitary tract (NTS), the rise in tyrosine hydroxylase and DBH two major central noradrenergic systems and the HPA axis after mRNAs with both IMOs was absent, or greatly attenuated, in exposure to single and repeated IMO.OVX female rats received EB- or PPT-treated rats. In most cases, WAY-200070 inhibited 21 daily injections of either EB (25 mg/kg), PPT (10 mg/kg), the response to single IMO but not to repeated IMO.The results WAY-200070 (10 mg/kg), or vehicle. -
(12) Patent Application Publication (10) Pub. No.: US 2003/0082511 A1 Brown Et Al
US 20030082511A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2003/0082511 A1 Brown et al. (43) Pub. Date: May 1, 2003 (54) IDENTIFICATION OF MODULATORY Publication Classification MOLECULES USING INDUCIBLE PROMOTERS (51) Int. Cl." ............................... C12O 1/00; C12O 1/68 (52) U.S. Cl. ..................................................... 435/4; 435/6 (76) Inventors: Steven J. Brown, San Diego, CA (US); Damien J. Dunnington, San Diego, CA (US); Imran Clark, San Diego, CA (57) ABSTRACT (US) Correspondence Address: Methods for identifying an ion channel modulator, a target David B. Waller & Associates membrane receptor modulator molecule, and other modula 5677 Oberlin Drive tory molecules are disclosed, as well as cells and vectors for Suit 214 use in those methods. A polynucleotide encoding target is San Diego, CA 92121 (US) provided in a cell under control of an inducible promoter, and candidate modulatory molecules are contacted with the (21) Appl. No.: 09/965,201 cell after induction of the promoter to ascertain whether a change in a measurable physiological parameter occurs as a (22) Filed: Sep. 25, 2001 result of the candidate modulatory molecule. Patent Application Publication May 1, 2003 Sheet 1 of 8 US 2003/0082511 A1 KCNC1 cDNA F.G. 1 Patent Application Publication May 1, 2003 Sheet 2 of 8 US 2003/0082511 A1 49 - -9 G C EH H EH N t R M h so as se W M M MP N FIG.2 Patent Application Publication May 1, 2003 Sheet 3 of 8 US 2003/0082511 A1 FG. 3 Patent Application Publication May 1, 2003 Sheet 4 of 8 US 2003/0082511 A1 KCNC1 ITREXCHO KC 150 mM KC 2000000 so 100 mM induced Uninduced Steady state O 100 200 300 400 500 600 700 Time (seconds) FIG. -
Independent Regulation of Vertebral Number and Vertebral Identity by Microrna-196 Paralogs
Independent regulation of vertebral number and vertebral identity by microRNA-196 paralogs Siew Fen Lisa Wonga,1, Vikram Agarwalb,c,d,e,1, Jennifer H. Mansfieldf,g, Nicolas Denansh, Matthew G. Schwartzf, Haydn M. Prosseri, Olivier Pourquiéf,j, David P. Bartelb,c,d, Clifford J. Tabinf,2, and Edwina McGlinna,f,2 aEMBL Australia, Australian Regenerative Medicine Institute, Monash University, Clayton, VIC 3800, Australia; bHoward Hughes Medical Institute, Cambridge, MA 02142; cWhitehead Institute for Biomedical Research, Cambridge, MA 02142; dDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139; eComputational and Systems Biology Program, Massachusetts Institute of Technology, Cambridge, MA 02139; fDepartment of Genetics, Harvard Medical School, Boston, MA 02115; gDepartment of Biological Sciences, Barnard College, New York, NY 10027; hDepartment of Developmental Biology and Genetics, Stanford School of Medicine, Stanford, CA 94305; iThe Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, United Kingdom; and jDepartment of Pathology, Brigham and Women’s Hospital, Boston, MA 02115 Contributed by Clifford J. Tabin, July 16, 2015 (sent for review March 24, 2015; reviewed by Jacqueline Deschamps and Joshua T. Mendell) The Hox genes play a central role in patterning the embryonic anterior- of which is a critical factor in establishing species-specific vertebral to-posterior axis. An important function of Hox activity in verte- number (8). brates is the specification of different vertebral morphologies, with Within vertebral precursors, specific combinations of Hox an additional role in axis elongation emerging. The miR-196 family transcription factors impart positional information that governs of microRNAs (miRNAs) are predicted to extensively target Hox 3′ vertebral identity (9). -
Strategies to Study Sex-Determining Genes in the Mouse
Strategies to study sex-determining genes in the mouse Amy E. Johnson A thesis submitted to the University of London in fulfilment of the requirements for the degree of Doctor of Philosophy. May 2002 Division of Developmental Genetics, National Institute For Medical Research, The Ridgeway, Mill Hill, London, NW7 lAY. ProQuest Number: U643301 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest. ProQuest U643301 Published by ProQuest LLC(2015). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code. Microform Edition © ProQuest LLC. ProQuest LLC 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106-1346 This thesis is dedicated to my immediate family, Janice, Clive, Molly, Matthew, Ben, Emma and my fiancé Geoff Table Of Contents ACKNOWLEDGEMENTS ............................................ / ABSTRACT ....................................................................................................................IV 1 CHAPTER 1- GENERAL INTRODUCTION....................................................... 1 lA SEX DETERMINATION......................................................................................1 1.1.1 Drosophila and C-ele^ans .................................................................................1 -
Alternative Splicing in the Nuclear Receptor Superfamily Expands Gene Function to Refine Endo-Xenobiotic Metabolism S
Supplemental material to this article can be found at: http://dmd.aspetjournals.org/content/suppl/2020/01/24/dmd.119.089102.DC1 1521-009X/48/4/272–287$35.00 https://doi.org/10.1124/dmd.119.089102 DRUG METABOLISM AND DISPOSITION Drug Metab Dispos 48:272–287, April 2020 Copyright ª 2020 by The American Society for Pharmacology and Experimental Therapeutics Minireview Alternative Splicing in the Nuclear Receptor Superfamily Expands Gene Function to Refine Endo-Xenobiotic Metabolism s Andrew J. Annalora, Craig B. Marcus, and Patrick L. Iversen Department of Environmental and Molecular Toxicology, Oregon State University, Corvallis, Oregon (A.J.A., C.B.M., P.L.I.) and United States Army Research Institute for Infectious Disease, Frederick, Maryland (P.L.I.) Received August 16, 2019; accepted December 31, 2019 ABSTRACT Downloaded from The human genome encodes 48 nuclear receptor (NR) genes, whose Exon inclusion options are differentially distributed across NR translated products transform chemical signals from endo- subfamilies, suggesting group-specific conservation of resilient func- xenobiotics into pleotropic RNA transcriptional profiles that refine tionalities. A deeper understanding of this transcriptional plasticity drug metabolism. This review describes the remarkable diversifica- expands our understanding of how chemical signals are refined and tion of the 48 human NR genes, which are potentially processed into mediated by NR genes. This expanded view of the NR transcriptome over 1000 distinct mRNA transcripts by alternative splicing (AS). The informs new models of chemical toxicity, disease diagnostics, and dmd.aspetjournals.org average human NR expresses ∼21 transcripts per gene and is precision-based approaches to personalized medicine. -
MAGE-A11 Is Activated Through TFCP2/ZEB1 Binding Sites De-Methylation As Well As Histone Modification and Facilitates ESCC Tumor Growth
www.impactjournals.com/oncotarget/ Oncotarget, 2018, Vol. 9, (No. 3), pp: 3365-3378 Research Paper MAGE-A11 is activated through TFCP2/ZEB1 binding sites de-methylation as well as histone modification and facilitates ESCC tumor growth Shina Liu1,*, Fei Liu1,*, Weina Huang1, Lina Gu1, Lingjiao Meng1, Yingchao Ju1,2, Yunyan Wu1, Juan Li1, Lihua Liu1 and Meixiang Sang1,3 1Research Center, the Fourth Hospital of Hebei Medical University, Shijiazhuang 050011, P. R. China 2Animal Center, the Fourth Hospital of Hebei Medical University, Shijiazhuang 050011, P. R. China 3Tumor Research Institute, the Fourth Hospital of Hebei Medical University, Shijiazhuang 050011, P. R. China *These authors contributed equally to this work Correspondence to: Meixiang Sang, email: [email protected] Keywords: MAGE-A11; ESCC; DNA methylation; histone acetylation; histone methylation Received: September 30, 2017 Accepted: November 15, 2017 Published: December 05, 2017 Copyright: Liu et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ABSTRACT Recently, we have reported that the product of Melanoma Antigens Genes (MAGE) family member MAGE-A11 is an independent poor prognostic marker for esophageal squamous cell carcinoma (ESCC). However, the reason how MAGE-A11 is activated in ESCC progression still remains unclear. In the current study, we demonstrated that DNA methylation and the subsequent histone posttranslational modifications play crucial roles in the regulation of MAGE-A11 in ESCC progression. We found that the methylation rate of TFCP2/ZEB1 binding site on MAGE-A11 promoter in ESCC tissues and cells is higher than the normal esophageal epithelial tissues and cells.