Effects of Habitat Loss and Fragmentation on Amphibians: a Review and Prospectus
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Extinction Patterns, Δ18 O Trends, and Magnetostratigraphy from a Southern High-Latitude Cretaceous–Paleogene Section: Links with Deccan Volcanism
Palaeogeography, Palaeoclimatology, Palaeoecology 350–352 (2012) 180–188 Contents lists available at SciVerse ScienceDirect Palaeogeography, Palaeoclimatology, Palaeoecology journal homepage: www.elsevier.com/locate/palaeo Extinction patterns, δ18 O trends, and magnetostratigraphy from a southern high-latitude Cretaceous–Paleogene section: Links with Deccan volcanism Thomas S. Tobin a,⁎, Peter D. Ward a, Eric J. Steig a, Eduardo B. Olivero b, Isaac A. Hilburn c, Ross N. Mitchell d, Matthew R. Diamond c, Timothy D. Raub e, Joseph L. Kirschvink c a University of Washington, Earth and Space Sciences, Box 351310, Seattle WA 98195, United States b CADIC-CONICET, Bernardo Houssay, V9410CAB, Ushuaia, Tierra del Fuego, Argentina c California Institute of Technology, Geological and Planetary Sciences, 1200 E. California Blvd. Pasadena CA 91125, United States d Yale University, Geology & Geophysics, 230 Whitney Ave. New Haven, CT 06511, United States e University of St. Andrews, Department of Earth Sciences, St. Andrews KY16 9AL, UK article info abstract Article history: Although abundant evidence now exists for a massive bolide impact coincident with the Cretaceous–Paleogene Received 19 April 2012 (K–Pg) mass extinction event (~65.5 Ma), the relative importance of this impact as an extinction mechanism is Received in revised form 27 May 2012 still the subject of debate. On Seymour Island, Antarctic Peninsula, the López de Bertodano Formation yields one Accepted 8 June 2012 of the most expanded K–Pg boundary sections known. Using a new chronology from magnetostratigraphy, and Available online 10 July 2012 isotopic data from carbonate-secreting macrofauna, we present a high-resolution, high-latitude paleotemperature record spanning this time interval. -
Species of Greatest Conservation Need Species Accounts
2 0 1 5 – 2 0 2 5 Species of Greatest Conservation Need Species Accounts Appendix 1.4C-Amphibians Amphibian Species of Greatest Conservation Need Maps: Physiographic Provinces and HUC Watersheds Species Accounts (Click species name below or bookmark to navigate to species account) AMPHIBIANS Eastern Hellbender Northern Ravine Salamander Mountain Chorus Frog Mudpuppy Eastern Mud Salamander Upland Chorus Frog Jefferson Salamander Eastern Spadefoot New Jersey Chorus Frog Blue-spotted Salamander Fowler’s Toad Western Chorus Frog Marbled Salamander Northern Cricket Frog Northern Leopard Frog Green Salamander Cope’s Gray Treefrog Southern Leopard Frog The following Physiographic Province and HUC Watershed maps are presented here for reference with conservation actions identified in the species accounts. Species account authors identified appropriate Physiographic Provinces or HUC Watershed (Level 4, 6, 8, 10, or statewide) for specific conservation actions to address identified threats. HUC watersheds used in this document were developed from the Watershed Boundary Dataset, a joint project of the U.S. Dept. of Agriculture-Natural Resources Conservation Service, the U.S. Geological Survey, and the Environmental Protection Agency. Physiographic Provinces Central Lowlands Appalachian Plateaus New England Ridge and Valley Piedmont Atlantic Coastal Plain Appalachian Plateaus Central Lowlands Piedmont Atlantic Coastal Plain New England Ridge and Valley 675| Appendix 1.4 Amphibians Lake Erie Pennsylvania HUC4 and HUC6 Watersheds Eastern Lake Erie -
Blue-Spotted Salamander
Species Status Assessment Class: Amphibia Family: Ambystomatidae Scientific Name: Ambystoma laterale Common Name: Blue-spotted salamander Species synopsis: The blue-spotted salamander has the northernmost distribution of any Ambystoma species, occurring in east-central North America as far north as Labrador, with its distribution dipping southward into the northeastern United States only as far as northern New Jersey. In New York, this salamander occurs in a patchy distribution outside of high elevation areas; its occurrence on Long Island is only in the farthest eastern reaches. Blue-spotted salamander habitat is the moist forest floor of deciduous or mixed woodlands near ephemeral bodies of water. Reliable population trends are not available for this salamander. Hybridization occurs between blue-spotted salamander and Jefferson salamander (A. jeffersonianum). Broadly referred to as the Jefferson complex, the variety of hybrids includes up to five different chromosomal combinations. Some of the hybrids have been called Tremblay’s salamander or silvery salamander, but most references are to “Jefferson complex.” This unusual situation has lead to difficulty in defining the distribution of blue-spotted salamander and Jefferson salamander, the hybrids of which are very difficult to distinguish, typically, without genetic testing in conjunction with their appearance. In Connecticut, the blue-spotted diploid and the blue-spotted complex have been listed individually, as Threatened and Special Concern respectively but no other state or province has made this distinction in listing status. 1 I. Status a. Current and Legal Protected Status i. Federal ___Not Listed_______________________ Candidate? ___No____ ii. New York ___Special Concern; SGCN_____________________________________ b. Natural Heritage Program Rank i. Global _____G5__________________________________________________________ ii. -
Forestry Habitat Management Guidelines for Vernal Pool Wildlife
$8.00 Forestry Habitat Management Guidelines for Vernal Pool Wildlife Metropolitan Conservation Alliance a program of MCA Technical Paper Series: No. 6 Aram J. K. Calhoun, Ph.D. Department of Plant, Soil, and Environmental Sciences University of Maine, Orono, Maine 04469 Maine Audubon 20 Gilsland Farm Rd., Falmouth, Maine 04105 Phillip deMaynadier, Ph.D. Maine Department of Inland Fisheries and Wildlife Endangered Species Group, 650 State Street, Bangor, Maine 04401 A cooperative publication of the University of Maine, Maine Audubon, Maine Department of Inland Fisheries and Wildlife, Maine Department of Conservation, and the Wildlife Conservation Society. Cover illustration: Nancy J. Haver Suggested citation: Calhoun, A. J. K. and P. deMaynadier. 2004. Forestry habitat management guidelines for vernal pool wildlife. MCA Technical Paper No. 6, Metropolitan Conservation Alliance, Wildlife Conservation Society, Bronx, New York. Additional copies of this document can be obtained from: Maine Audubon 20 Gilsland Farm Road, Falmouth, ME 04105 (207) 781-2330 -------- Maine Department of Inland Fisheries and Wildlife 284 State Street, 41 SHS, Augusta, ME 04333 (207) 287-8000 -------- Metropolitan Conservation Alliance, Wildlife Conservation Society 68 Purchase Street, 3rd Floor, Rye, New York 10580 (914) 925-9175 ISBN 0-9724810-1-X ISSN 1542-8133 Printed on partially recycled paper. ACKNOWLEDGEMENTS THE PROCESS OF GUIDELINE DEVELOPMENT BENEFITED from active participation by Maine’s forest products industry (Georgia-Pacific Corp., Great Northern -
Estimating Rates of Local Species Extinction, Colonization, and Turnover in Animal Communities
Ecological Applications, 8(4), 1998, pp. 1213±1225 q 1998 by the Ecological Society of America ESTIMATING RATES OF LOCAL SPECIES EXTINCTION, COLONIZATION, AND TURNOVER IN ANIMAL COMMUNITIES JAMES D. NICHOLS,1 THIERRY BOULINIER,2 JAMES E. HINES,1 KENNETH H. POLLOCK,3 AND JOHN R. SAUER1 1U.S. Geological Survey, Biological Resources Division, Patuxent Wildlife Research Center, Laurel, Maryland 20708 USA 2North Carolina Cooperative Fish and Wildlife Research Unit, North Carolina State University, Raleigh, North Carolina 27695 USA 3Institute of Statistics, North Carolina State University, Box 8203, Raleigh, North Carolina 27695-8203 USA Abstract. Species richness has been identi®ed as a useful state variable for conservation and management purposes. Changes in richness over time provide a basis for predicting and evaluating community responses to management, to natural disturbance, and to changes in factors such as community composition (e.g., the removal of a keystone species). Prob- abilistic capture±recapture models have been used recently to estimate species richness from species count and presence±absence data. These models do not require the common assumption that all species are detected in sampling efforts. We extend this approach to the development of estimators useful for studying the vital rates responsible for changes in animal communities over time: rates of local species extinction, turnover, and coloni- zation. Our approach to estimation is based on capture±recapture models for closed animal populations that permit heterogeneity in detection probabilities among the different species in the sampled community. We have developed a computer program, COMDYN, to compute many of these estimators and associated bootstrap variances. -
Species Assessment for Jefferson Salamander
Species Status Assessment Class: Amphibia Family: Ambystomidae Scientific Name: Ambystoma jeffersonianum Common Name: Jefferson salamander Species synopsis: The distribution of the Jefferson salamander is restricted to the northeastern quarter of the United States extending as far to the southwest as Illinois and Kentucky; the species is represented in Canada only in a small area of southern Ontario. The habitat includes upland deciduous or mixed woodlands as well as bottomland forests adjacent to disturbed and agricultural lands. Breeding occurs in temporary ponds or semi-permanent wetlands (Gibbs et al. 2007). Hybridization occurs between the Jefferson salamander and the blue-spotted salamander (A. laterale). Broadly referred to as the Jefferson complex, the variety of hybrids includes up to five different chromosomal combinations. Some of the hybrids have been called Tremblay’s salamander or silvery salamander, but most references are to “Jefferson complex.” This unusual situation has lead to difficulty in defining the distribution of blue-spotted salamander and Jefferson salamander, the hybrids of which are very difficult to distinguish, typically, without genetic testing in conjunction with their appearance. I. Status a. Current and Legal Protected Status i. Federal ____ Not Listed_____________________ Candidate? __No_____ ii. New York ____Special Concern; SGCN___________________________________ b. Natural Heritage Program Rank i. Global ____G4____________________________________________________________ ii. New York ____S4_____________________ Tracked by NYNHP? ___No____ Other Rank: Species of Northeast Regional Conservation Concern (Therres 1999) Species of Severe Concern and High Responsibility (NEPARC 2010) 1 Status Discussion: Jefferson salamander is considered to be locally abundant in suitable habitat across New York. It has been designated as a Species of Regional Conservation in the Northeast due to its unknown population status and taxonomic uncertainty (Therres 1999). -
Addressing the Mammoth in the Room: the Ethical and Political Implications of De- Extinction
Addressing the Mammoth in the room: The ethical and political implications of de- extinction (Ashlock, 2013) Lowieke Vermeulen (S4374452) Political Science: Political Theory Radboud University, Nijmegen, Netherlands Supervisor: prof. dr. Marcel Wissenburg Date: August 12, 2019 Word count: 23590 1 Table of Contents Chapter 1: Introduction...............................................................................................................3 1.2 Thesis structure............................................................................................................................6 Chapter 2: De-extinction and species selection..........................................................8 2.1 Extinction........................................................................................................................................9 2.2 Approaches to de-extinction.................................................................................................10 2.2.1 Back-breeding.........................................................................................................................10 2.2.2 Cloning.......................................................................................................................................12 2.2.3 Genetic engineering..............................................................................................................12 2.2.4 Mixed approaches..................................................................................................................13 2.3 -
Blue-Spotted Salamander Ambystoma Laterale
Blue-spotted Salamander Ambystoma laterale Massachusetts Division of Fisheries & Wildlife State Status: Species of Special Concern Route 135, Westborough, MA 01581 Federal Status: None tel: (508) 389-6360; fax: (508) 389-7891 www.nhesp.org Description: The blue-spotted salamander is a slender salamander with short limbs, long digits, and a narrow, rounded snout. A dark blue to black dorsum with brilliant sky-blue spots or specks on the lower sides of the body makes the coloration of this species quite distinct and reminiscent of antique blue enamel pots and dishware. The ventral surface is a paler grey with black pigmentation surrounding the vent. The tail is long and laterally compressed; averaging 44% of the total body length. Adults Photo by Bill Byrne range from 4.0 to 5.5 inches (10 to 14 cm) in total length. though, these two hybrid populations have been formally named as the Silvery salamander Determining the sex of this species is easiest done (Ambystoma platineum) and the Tremblay’s during the breeding season, when males are salamander (Ambystoma tremblayi), the hybrid identifiable by a swollen vent area caused by salamanders are simply referred to as the Jefferson / enlarged cloacal glands. Additionally, the larvae are Blue-spotted complex salamander. also difficult to differentiate from other Ambystoma species; larvae are olive green to black and have a When the Jefferson / Blue-spotted complex hybrids are long dorsal fin that extends from behind the head present in an area, they may outnumber the blue-spotted along the back and tail. or Jefferson salamanders by a 2:1 margin. -
Probabilistic Models of Geographic Range Evolution Will Freyman 10 SYSTEMATIC BIOLOGY VOL
Probabilistic Models of Geographic Range Evolution Will Freyman 10 SYSTEMATIC BIOLOGY VOL. 57 IB200, Spring 2016 Downloaded from http://sysbio.oxfordjournals.org/ at University of California School Law (Boalt Hall) on April 12, 2016 Image: Richard H Ree and Stephen A Smith. Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Systematic Biology, 57(1):4–14, 2008. FIGURE 3. Copyedited by: TRJ MANUSCRIPT CATEGORY: Article 2013 LANDIS ET AL.—BAYESIAN BIOGEOGRAPHY FOR MANY AREAS 3 A) B) There are an infinite number of biogeographic 1234011001 010 011 histories that can explain the observed geographic 011 001 ranges. When calculating the probability of the observed Biogeographic histories on geographic ranges at the tips of the phylogenetic tree, 010 a phylogeny: 5 011 it is unreasonable to condition on a specific history 001 101 of biogeographic change. After all, the past history 101 of biogeographic change is not observable. Instead, 6 111 011 the usual approach is to marginalize over all possible 111 histories of biogeographic change that could give rise 7 to the observed geographic ranges. The standard way 111 Downloaded from 101 to do this is to assume that events of colonization or local extinction occur according to a continuous- 8 101 time Markov chain (Ree et al. 2005). Marginalizing over histories of biogeographic change is accomplished C) D) 011101 010 011 011001 010 011 using two procedures. First, exponentiation of the 010 instantaneous-rate matrix, Q, gives the probability http://sysbio.oxfordjournals.org/ 011 010 011 011 011 011 111 111 001 density of all possible biogeographic changes along a 011 010 branch 111 010 101 011 011 111 011 001 Qt 111 101 011 p(y z t,Q) e− , 111 101 → ; = yz 001 % & 101 111 111 011 where y is the ancestral geographic range, z is the 011 001 current geographic range, and t is the duration of the 001 011 branch on the tree. -
Unisexual Ambystoma Ambystoma Laterale
COSEWIC Assessment and Status Report on the Unisexual Ambystoma Ambystoma laterale Small-mouthed Salamander−dependent population (Ambystoma laterale - texanum) Jefferson Salamander−dependent population (Ambystoma laterale - (2) jeffersonianum) Blue-spotted Salamander–dependent population (Ambystoma (2) laterale - jeffersonianum) in Canada Small-mouthed Salamander dependent population - ENDANGERED Jefferson Salamander dependent population - ENDANGERED Blue-spotted Salamander dependent population- NOT AT RISK 2016 COSEWIC status reports are working documents used in assigning the status of wildlife species suspected of being at risk. This report may be cited as follows: COSEWIC. 2016. COSEWIC assessment and status report on the unisexual Ambystoma, Ambystoma laterale, Small-mouthed Salamander–dependent population, Jefferson Salamander–dependent population and the Blue-spotted Salamander–dependent population, in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. xxii + 61 pp. (http://www.registrelep- sararegistry.gc.ca/default_e.cfm). Production note: COSEWIC would like to acknowledge Jim Bogart for writing the status report on the unisexual Ambystoma in Canada. This report was prepared under contract with Environment Canada and was overseen by Kristiina Ovaska, Co-chair of the COSEWIC Amphibian and Reptile Species Specialist Subcommittee. For additional copies contact: COSEWIC Secretariat c/o Canadian Wildlife Service Environment Canada Ottawa, ON K1A 0H3 Tel.: 819-938-4125 Fax: 819-938-3984 E-mail: [email protected] http://www.cosewic.gc.ca Également disponible en français sous le titre Ếvaluation et Rapport de situation du COSEPAC sur L’ambystoma unisexué (Ambystoma laterale), population dépendante de la salamandre à petite bouche, population dépendante de la salamandre de Jefferson et la population dépendante de la salamandre à points bleus, au Canada. -
Determining Species Expansion and Extinction Possibilities Using Probabilistic and Graphical Models
Ekológia (Bratislava) Vol. 34, No. 2, p. 111–120, 2015 DOI:10.1515/eko-2015-0012 DetermininG species EXpansion AND EXtinction possibilities UsinG probabilistic AND Graphical models RAJESH CHATURVEDI, P. RAMA CHANDRA PRASAD Lab for Spatial Informatics, International Institute of Information Technology, Gachibowli, Hyderabad - 500032, India; e-mail: [email protected], [email protected] Abstract Chaturvedi R., Prasad R.Ch.: Determining species expansion and extinction possibilities using probabilistic and graphical models. Ekológia (Bratislava), Vol. 34, No. 2, p. 111–120, 2015. Survival of plant species is governed by a number of functions. The participation of each function in species survival and the impact of the contrary behaviour of the species vary from function to function. The probability of extinction of species varies in all such scenarios and has to be calculated separately. Secondly, species follow different patterns of dispersal and localisation at different stages of occupancy state of the site, therefore, the scenarios of competition for resources with climatic shifts leading to deterioration and loss of biodiversity resulting in extinction needs to be studied. Furthermore, most po- ssible deviations of species from climax community states needs to be calculated before species become extinct due to sudden environmental disruption. Globally, various types of anthropogenic disturbances threaten the diversity of biological systems. The impact of these anthropogenic activities needs to be analysed to identify extinction patterns with respect to these activities. All the analyses mentioned abo- ve have been tried to be achieved through probabilistic or graphical models in this study. Key words: biodiversity, disturbances, climate change, endangered, risks, ecological models. -
Mammalian Evolution During the Cretaceous-Tertiary Transition; Evidence Fo~
Acta Palaeontologica Polonica Vol. 28, No. 1-2 pp, 55-61 Warszawa, 1983 Second Symposium on Mesozoic T errestial Ecosystems, Jadwisin 1981 WILLIAM A. CLEMENS MAMMALIAN EVOLUTION DURING THE CRETACEOUS-TERTIARY TRANSITION; EVIDENCE FO~ . GRADUAL, NON-CATASTROPHIC PATTERNS OF BIOTIC CHANGE CLEMENS WILLIAM A. : Mammalian evolution during the Cretaceous-Tertiary transition; ev idence for gradual, non-catastrophic patterns of biotic change. Acta Palaeont. Polonlca, 28, 1-2, 55-61, 1983, Hypotheses Invoking catastrophic causal factors for terminal Cretaceous extinctions call for, 1) Instantaneous, global extinctions, 2) resulting from a single or dominant causal factor. 'c u rr entl y available methods of correlation are not precise enough to test the first element of these hypotheses. Patterns of mammalian extinction and survival In northeastern Montana, USA - as well as records of other organisms - argue against the second element. In Montana most of the lineages of marsupials were decimated. Extinction of multltuber curates was not as severe, while only one lineage of eutherlans appears to have become extinct. Groups that apparently Immigrated Into northeastern Montana just prior to the end of the Cretaceous had a greater probability of survival than the residents. The prObability of extinction was Independent of Individual body size. Different patterns of mammalian extinction In different environments also appear to defy explanation In terms of one common, catastrophic causal factor. Key w 0 r d s: Mammalia, Cretaceous, Tertiary, extinction, Montana, USA . Wltltam A . Clemens. Department Of Paleontology. University 01 Callfornla. Berkeley, Callfornla. 94720. USA. Recei ved: September 1981. INTRODUCTION Scientific and popular publications continue to be flooded with articles concerning the causes of the extinction of dinosaurs and other organisms used to mark the end of the Cretaceous.