Mammalian Evolution During the Cretaceous-Tertiary Transition; Evidence Fo~
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New Large Leptictid Insectivore from the Late Paleogene of South Dakota, USA
New large leptictid insectivore from the Late Paleogene of South Dakota, USA TJ MEEHAN and LARRY D. MARTIN Meehan, T.J. and Martin, L.D. 2012. New large leptictid insectivore from the Late Paleogene of South Dakota, USA. Acta Palaeontologica Polonica 57 (3): 509–518. From a skull and mandible, we describe a new genus and species of a primitive insectivore (Mammalia: Insectivora: Leptictida: Leptictidae). Its large body size and higher−crowned teeth indicate a different feeding ecology from other leptictid insectivores. With evidence of some heavy, flat wear on the molariform teeth, its shift in diet was likely to greater herbivory. Unlike the narrow snout of Blacktops, this new leptictid retains a broad snout, suggesting that small verte− brates were still important dietary components. The specimen was collected from the floodplain deposits of the lower or middle White River Group of South Dakota, which represent the latest Eocene to earliest Oligocene (Chadronian and Orellan North American Land Mammal “Ages”). Key words: Mammalia, Leptictidae, Leptictis, Megaleptictis, Eocene, Oligocene, White River Group, South Dakota, North America. TJ Meehan [[email protected]], Research Associate, Section of Vertebrate Paleontology, Carnegie Museum of Natural History, 4400 Forbes Avenue, Pittsburgh, PA 15213, USA; Larry D. Martin [[email protected]], Division of Vertebrate Paleontology, Natural History Museum and Biodiversity Re− search Center, University of Kansas, Lawrence, KS 66045, USA. Received 4 April 2011, accepted 25 July 2011, available online 17 August 2011. Introduction molariform teeth. A fossa in this region at least suggests in− creased snout mobility, but no definitive anatomical argument Leptictida is a primitive order of placental, insectivorous has been made to support a highly mobile cartilaginous snout mammals convergent to extant sengis or elephant “shrews” tip, as in sengis. -
The Fauna from the Tyrannosaurus Rex Excavation, Frenchman Formation (Late Maastrichtian), Saskatchewan
The Fauna from the Tyrannosaurus rex Excavation, Frenchman Formation (Late Maastrichtian), Saskatchewan Tim T. Tokaryk 1 and Harold N. Bryant 2 Tokaryk, T.T. and Bryant, H.N. (2004): The fauna from the Tyrannosaurus rex excavation, Frenchman Formation (Late Maastrichtian), Saskatchewan; in Summary of Investigations 2004, Volume 1, Saskatchewan Geological Survey, Sask. Industry Resources, Misc. Rep. 2004-4.1, CD-ROM, Paper A-18, 12p. Abstract The quarry that contained the partial skeleton of the Tyrannosaurus rex, familiarly known as “Scotty,” has yielded a diverse faunal and floral assemblage. The site is located in the Frenchman River valley in southwestern Saskatchewan and dates from approximately 65 million years, at the end of the Cretaceous Period. The faunal assemblage from the quarry is reviewed and the floral assemblage is summarized. Together, these assemblages provide some insight into the biological community that lived in southwestern Saskatchewan during the latest Cretaceous. Keywords: Frenchman Formation, Maastrichtian, Late Cretaceous, southwestern Saskatchewan, Tyrannosaurus rex. 1. Introduction a) Geological Setting The Frenchman Formation, of latest Maastrichtian age, is extensively exposed in southwestern Saskatchewan (Figure 1; Fraser et al., 1935; Furnival, 1950). The lithostratigraphic units in the formation consist largely of fluvial sandstones and greenish grey to green claystones. Outcrops of the Frenchman Formation are widely distributed in the Frenchman River valley, southeast of Eastend. Chambery Coulee, on the north side of the valley, includes Royal Saskatchewan Museum (RSM) locality 72F07-0022 (precise locality data on file with the RSM), the site that contained the disarticulated skeleton of a Tyrannosaurus rex. McIver (2002) subdivided the stratigraphic sequence at this locality into “lower” and “upper” beds. -
The Making of Calibration Sausage Exemplified by Recalibrating the Transcriptomic Timetree of Jawed Vertebrates
bioRxiv preprint doi: https://doi.org/10.1101/2019.12.19.882829; this version posted January 5, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. The making of calibration sausage exemplified by recalibrating the transcriptomic timetree of jawed vertebrates 1 David Marjanović 2 Department of Evolutionary Morphology, Science Programme “Evolution and Geoprocesses”, 3 Museum für Naturkunde – Leibniz Institute for Evolutionary and Biodiversity Research, Berlin, 4 Germany 5 ORCID: 0000-0001-9720-7726 6 Correspondence: 7 David Marjanović 8 [email protected] 9 Keywords: timetree, calibration, divergence date, Gnathostomata, Vertebrata 10 Abstract 11 Molecular divergence dating has the potential to overcome the incompleteness of the fossil record in 12 inferring when cladogenetic events (splits, divergences) happened, but needs to be calibrated by the 13 fossil record. Ideally but unrealistically, this would require practitioners to be specialists in molecular 14 evolution, in the phylogeny and the fossil record of all sampled taxa, and in the chronostratigraphy of 15 the sites the fossils were found in. Paleontologists have therefore tried to help by publishing 16 compendia of recommended calibrations, and molecular biologists unfamiliar with the fossil record 17 have made heavy use of such works (in addition to using scattered primary sources -
Extinction Patterns, Δ18 O Trends, and Magnetostratigraphy from a Southern High-Latitude Cretaceous–Paleogene Section: Links with Deccan Volcanism
Palaeogeography, Palaeoclimatology, Palaeoecology 350–352 (2012) 180–188 Contents lists available at SciVerse ScienceDirect Palaeogeography, Palaeoclimatology, Palaeoecology journal homepage: www.elsevier.com/locate/palaeo Extinction patterns, δ18 O trends, and magnetostratigraphy from a southern high-latitude Cretaceous–Paleogene section: Links with Deccan volcanism Thomas S. Tobin a,⁎, Peter D. Ward a, Eric J. Steig a, Eduardo B. Olivero b, Isaac A. Hilburn c, Ross N. Mitchell d, Matthew R. Diamond c, Timothy D. Raub e, Joseph L. Kirschvink c a University of Washington, Earth and Space Sciences, Box 351310, Seattle WA 98195, United States b CADIC-CONICET, Bernardo Houssay, V9410CAB, Ushuaia, Tierra del Fuego, Argentina c California Institute of Technology, Geological and Planetary Sciences, 1200 E. California Blvd. Pasadena CA 91125, United States d Yale University, Geology & Geophysics, 230 Whitney Ave. New Haven, CT 06511, United States e University of St. Andrews, Department of Earth Sciences, St. Andrews KY16 9AL, UK article info abstract Article history: Although abundant evidence now exists for a massive bolide impact coincident with the Cretaceous–Paleogene Received 19 April 2012 (K–Pg) mass extinction event (~65.5 Ma), the relative importance of this impact as an extinction mechanism is Received in revised form 27 May 2012 still the subject of debate. On Seymour Island, Antarctic Peninsula, the López de Bertodano Formation yields one Accepted 8 June 2012 of the most expanded K–Pg boundary sections known. Using a new chronology from magnetostratigraphy, and Available online 10 July 2012 isotopic data from carbonate-secreting macrofauna, we present a high-resolution, high-latitude paleotemperature record spanning this time interval. -
Resolving the Relationships of Paleocene Placental Mammals
Biol. Rev. (2015), pp. 000–000. 1 doi: 10.1111/brv.12242 Resolving the relationships of Paleocene placental mammals Thomas J. D. Halliday1,2,∗, Paul Upchurch1 and Anjali Goswami1,2 1Department of Earth Sciences, University College London, Gower Street, London WC1E 6BT, U.K. 2Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, U.K. ABSTRACT The ‘Age of Mammals’ began in the Paleocene epoch, the 10 million year interval immediately following the Cretaceous–Palaeogene mass extinction. The apparently rapid shift in mammalian ecomorphs from small, largely insectivorous forms to many small-to-large-bodied, diverse taxa has driven a hypothesis that the end-Cretaceous heralded an adaptive radiation in placental mammal evolution. However, the affinities of most Paleocene mammals have remained unresolved, despite significant advances in understanding the relationships of the extant orders, hindering efforts to reconstruct robustly the origin and early evolution of placental mammals. Here we present the largest cladistic analysis of Paleocene placentals to date, from a data matrix including 177 taxa (130 of which are Palaeogene) and 680 morphological characters. We improve the resolution of the relationships of several enigmatic Paleocene clades, including families of ‘condylarths’. Protungulatum is resolved as a stem eutherian, meaning that no crown-placental mammal unambiguously pre-dates the Cretaceous–Palaeogene boundary. Our results support an Atlantogenata–Boreoeutheria split at the root of crown Placentalia, the presence of phenacodontids as closest relatives of Perissodactyla, the validity of Euungulata, and the placement of Arctocyonidae close to Carnivora. Periptychidae and Pantodonta are resolved as sister taxa, Leptictida and Cimolestidae are found to be stem eutherians, and Hyopsodontidae is highly polyphyletic. -
Estimating Rates of Local Species Extinction, Colonization, and Turnover in Animal Communities
Ecological Applications, 8(4), 1998, pp. 1213±1225 q 1998 by the Ecological Society of America ESTIMATING RATES OF LOCAL SPECIES EXTINCTION, COLONIZATION, AND TURNOVER IN ANIMAL COMMUNITIES JAMES D. NICHOLS,1 THIERRY BOULINIER,2 JAMES E. HINES,1 KENNETH H. POLLOCK,3 AND JOHN R. SAUER1 1U.S. Geological Survey, Biological Resources Division, Patuxent Wildlife Research Center, Laurel, Maryland 20708 USA 2North Carolina Cooperative Fish and Wildlife Research Unit, North Carolina State University, Raleigh, North Carolina 27695 USA 3Institute of Statistics, North Carolina State University, Box 8203, Raleigh, North Carolina 27695-8203 USA Abstract. Species richness has been identi®ed as a useful state variable for conservation and management purposes. Changes in richness over time provide a basis for predicting and evaluating community responses to management, to natural disturbance, and to changes in factors such as community composition (e.g., the removal of a keystone species). Prob- abilistic capture±recapture models have been used recently to estimate species richness from species count and presence±absence data. These models do not require the common assumption that all species are detected in sampling efforts. We extend this approach to the development of estimators useful for studying the vital rates responsible for changes in animal communities over time: rates of local species extinction, turnover, and coloni- zation. Our approach to estimation is based on capture±recapture models for closed animal populations that permit heterogeneity in detection probabilities among the different species in the sampled community. We have developed a computer program, COMDYN, to compute many of these estimators and associated bootstrap variances. -
Addressing the Mammoth in the Room: the Ethical and Political Implications of De- Extinction
Addressing the Mammoth in the room: The ethical and political implications of de- extinction (Ashlock, 2013) Lowieke Vermeulen (S4374452) Political Science: Political Theory Radboud University, Nijmegen, Netherlands Supervisor: prof. dr. Marcel Wissenburg Date: August 12, 2019 Word count: 23590 1 Table of Contents Chapter 1: Introduction...............................................................................................................3 1.2 Thesis structure............................................................................................................................6 Chapter 2: De-extinction and species selection..........................................................8 2.1 Extinction........................................................................................................................................9 2.2 Approaches to de-extinction.................................................................................................10 2.2.1 Back-breeding.........................................................................................................................10 2.2.2 Cloning.......................................................................................................................................12 2.2.3 Genetic engineering..............................................................................................................12 2.2.4 Mixed approaches..................................................................................................................13 2.3 -
Probabilistic Models of Geographic Range Evolution Will Freyman 10 SYSTEMATIC BIOLOGY VOL
Probabilistic Models of Geographic Range Evolution Will Freyman 10 SYSTEMATIC BIOLOGY VOL. 57 IB200, Spring 2016 Downloaded from http://sysbio.oxfordjournals.org/ at University of California School Law (Boalt Hall) on April 12, 2016 Image: Richard H Ree and Stephen A Smith. Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Systematic Biology, 57(1):4–14, 2008. FIGURE 3. Copyedited by: TRJ MANUSCRIPT CATEGORY: Article 2013 LANDIS ET AL.—BAYESIAN BIOGEOGRAPHY FOR MANY AREAS 3 A) B) There are an infinite number of biogeographic 1234011001 010 011 histories that can explain the observed geographic 011 001 ranges. When calculating the probability of the observed Biogeographic histories on geographic ranges at the tips of the phylogenetic tree, 010 a phylogeny: 5 011 it is unreasonable to condition on a specific history 001 101 of biogeographic change. After all, the past history 101 of biogeographic change is not observable. Instead, 6 111 011 the usual approach is to marginalize over all possible 111 histories of biogeographic change that could give rise 7 to the observed geographic ranges. The standard way 111 Downloaded from 101 to do this is to assume that events of colonization or local extinction occur according to a continuous- 8 101 time Markov chain (Ree et al. 2005). Marginalizing over histories of biogeographic change is accomplished C) D) 011101 010 011 011001 010 011 using two procedures. First, exponentiation of the 010 instantaneous-rate matrix, Q, gives the probability http://sysbio.oxfordjournals.org/ 011 010 011 011 011 011 111 111 001 density of all possible biogeographic changes along a 011 010 branch 111 010 101 011 011 111 011 001 Qt 111 101 011 p(y z t,Q) e− , 111 101 → ; = yz 001 % & 101 111 111 011 where y is the ancestral geographic range, z is the 011 001 current geographic range, and t is the duration of the 001 011 branch on the tree. -
Late Cretaceous Stratigraphy and Vertebrate Faunas of the Markagunt, Paunsaugunt, and Kaiparowits Plateaus, Southern Utah
GEOLOGY OF THE INTERMOUNTAIN WEST an open-access journal of the Utah Geological Association Volume 3 2016 LATE CRETACEOUS STRATIGRAPHY AND VERTEBRATE FAUNAS OF THE MARKAGUNT, PAUNSAUGUNT, AND KAIPAROWITS PLATEAUS, SOUTHERN UTAH Alan L. Titus, Jeffrey G. Eaton, and Joseph Sertich A Field Guide Prepared For SOCIETY OF VERTEBRATE PALEONTOLOGY Annual Meeting, October 26 – 29, 2016 Grand America Hotel Salt Lake City, Utah, USA Post-Meeting Field Trip October 30–November 1, 2016 © 2016 Utah Geological Association. All rights reserved. For permission to copy and distribute, see the following page or visit the UGA website at www.utahgeology.org for information. Email inquiries to [email protected]. GEOLOGY OF THE INTERMOUNTAIN WEST an open-access journal of the Utah Geological Association Volume 3 2016 Editors UGA Board Douglas A. Sprinkel Thomas C. Chidsey, Jr. 2016 President Bill Loughlin [email protected] 435.649.4005 Utah Geological Survey Utah Geological Survey 2016 President-Elect Paul Inkenbrandt [email protected] 801.537.3361 801.391.1977 801.537.3364 2016 Program Chair Andrew Rupke [email protected] 801.537.3366 [email protected] [email protected] 2016 Treasurer Robert Ressetar [email protected] 801.949.3312 2016 Secretary Tom Nicolaysen [email protected] 801.538.5360 Bart J. Kowallis Steven Schamel 2016 Past-President Jason Blake [email protected] 435.658.3423 Brigham Young University GeoX Consulting, Inc. 801.422.2467 801.583-1146 UGA Committees [email protected] [email protected] Education/Scholarship -
Determining Species Expansion and Extinction Possibilities Using Probabilistic and Graphical Models
Ekológia (Bratislava) Vol. 34, No. 2, p. 111–120, 2015 DOI:10.1515/eko-2015-0012 DetermininG species EXpansion AND EXtinction possibilities UsinG probabilistic AND Graphical models RAJESH CHATURVEDI, P. RAMA CHANDRA PRASAD Lab for Spatial Informatics, International Institute of Information Technology, Gachibowli, Hyderabad - 500032, India; e-mail: [email protected], [email protected] Abstract Chaturvedi R., Prasad R.Ch.: Determining species expansion and extinction possibilities using probabilistic and graphical models. Ekológia (Bratislava), Vol. 34, No. 2, p. 111–120, 2015. Survival of plant species is governed by a number of functions. The participation of each function in species survival and the impact of the contrary behaviour of the species vary from function to function. The probability of extinction of species varies in all such scenarios and has to be calculated separately. Secondly, species follow different patterns of dispersal and localisation at different stages of occupancy state of the site, therefore, the scenarios of competition for resources with climatic shifts leading to deterioration and loss of biodiversity resulting in extinction needs to be studied. Furthermore, most po- ssible deviations of species from climax community states needs to be calculated before species become extinct due to sudden environmental disruption. Globally, various types of anthropogenic disturbances threaten the diversity of biological systems. The impact of these anthropogenic activities needs to be analysed to identify extinction patterns with respect to these activities. All the analyses mentioned abo- ve have been tried to be achieved through probabilistic or graphical models in this study. Key words: biodiversity, disturbances, climate change, endangered, risks, ecological models. -
Dependent Sex Determination at The
Downloaded from rsbl.royalsocietypublishing.org on October 27, 2010 Biol. Lett. Indian plate peaked slightly before the K–Pg boundary doi:10.1098/rsbl.2010.0882 [3]. It has been widely suggested that one or both Published online events were responsible for the mass extinction at the Palaeontology K–Pg boundary and that each had profound effects on global climate. The impact vapourized large quantities of evaporite minerals, and the resulting sulphate aerosols Unexpected resilience of probably seeded clouds that reflected solar radiation [4]. The volcanic eruptions, which formed the Deccan Traps species with temperature- of India, released large quantities of CO2 into the atmos- phere and may have initiated global warming [5]. Those dependent sex species that had temperature-dependent sex determi- determination at the nation (TSD) are expected to have been negatively impacted by these climate changes [6,7]. Cretaceous–Palaeogene In TSD, the sex of the embryo is determined by the incubation temperature of the eggs. Incubation at the boundary pivotal temperature(s) yields a 1 : 1 sex ratio, small temp- erature deviations yield an unbalanced sex ratio and 1, 2 Sherman Silber *, Jonathan H. Geisler larger deviations yield single-sex clutches [8]. In genoty- and Minjin Bolortsetseg3 pic sex determination (GSD), a sex-determining gene 1Infertility Center of Saint Louis, St Luke’s Hospital, Saint Louis, activates a downstream cascade of other genes that are MO 63017, USA responsible for testis or ovarian development. The 2New York College of Osteopathic Medicine, Old Westbury, NY 11568, USA specific chromosomes and genes in GSD have evolved 3Institute for the Study of Mongolian Dinosaurs, Ulaanbaatar 14201, independently in numerous lineages, suggesting that it Mongolia has adaptive benefits [7]. -
Evidence for Local and Global Redox Conditions at an Early Ordovician (Tremadocian) Mass Extinction ∗ ∗∗ Cole T
Earth and Planetary Science Letters 481 (2018) 125–135 Contents lists available at ScienceDirect Earth and Planetary Science Letters www.elsevier.com/locate/epsl Evidence for local and global redox conditions at an Early Ordovician (Tremadocian) mass extinction ∗ ∗∗ Cole T. Edwards a,b, , David A. Fike b, Matthew R. Saltzman c, Wanyi Lu d, Zunli Lu d, a Department of Geological and Environmental Sciences, Appalachian State University, Boone, NC 28608, USA b Department of Earth and Planetary Sciences, Washington University, St. Louis, MO 63130, USA c School of Earth Sciences, The Ohio State University, Columbus, OH 43214, USA d Department of Earth Sciences, Syracuse University, Syracuse, NY 13244, USA a r t i c l e i n f o a b s t r a c t Article history: Profound changes in environmental conditions, particularly atmospheric oxygen levels, are thought to be Received 29 May 2017 important drivers of several major biotic events (e.g. mass extinctions and diversifications). The early Received in revised form 20 September Paleozoic represents a key interval in the oxygenation of the ocean–atmosphere system and evolution 2017 of the biosphere. Global proxies (e.g. carbon (δ13C) and sulfur (δ34S) isotopes) are used to diagnose Accepted 1 October 2017 potential changes in oxygenation and infer causes of environmental change and biotic turnover. The Available online xxxx Cambrian–Ordovician contains several trilobite extinctions (some are apparently local, but others are Editor: D. Vance 13 34 globally correlative) that are attributed to anoxia based on coeval positive δ C and δ S excursions. These Keywords: extinction and excursion events have yet to be coupled with more recently developed proxies thought Ordovician to be more reflective of local redox conditions in the water column (e.g.