Ostrea Edulis
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Biogeographical Homogeneity in the Eastern Mediterranean Sea. II
Vol. 19: 75–84, 2013 AQUATIC BIOLOGY Published online September 4 doi: 10.3354/ab00521 Aquat Biol Biogeographical homogeneity in the eastern Mediterranean Sea. II. Temporal variation in Lebanese bivalve biota Fabio Crocetta1,*, Ghazi Bitar2, Helmut Zibrowius3, Marco Oliverio4 1Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy 2Department of Natural Sciences, Faculty of Sciences, Lebanese University, Hadath, Lebanon 3Le Corbusier 644, 280 Boulevard Michelet, 13008 Marseille, France 4Dipartimento di Biologia e Biotecnologie ‘Charles Darwin’, University of Rome ‘La Sapienza’, Viale dell’Università 32, 00185 Roma, Italy ABSTRACT: Lebanon (eastern Mediterranean Sea) is an area of particular biogeographic signifi- cance for studying the structure of eastern Mediterranean marine biodiversity and its recent changes. Based on literature records and original samples, we review here the knowledge of the Lebanese marine bivalve biota, tracing its changes during the last 170 yr. The updated checklist of bivalves of Lebanon yielded a total of 114 species (96 native and 18 alien taxa), accounting for ca. 26.5% of the known Mediterranean Bivalvia and thus representing a particularly poor fauna. Analysis of the 21 taxa historically described on Lebanese material only yielded 2 available names. Records of 24 species are new for the Lebanese fauna, and Lioberus ligneus is also a new record for the Mediterranean Sea. Comparisons between molluscan records by past (before 1950) and modern (after 1950) authors revealed temporal variations and qualitative modifications of the Lebanese bivalve fauna, mostly affected by the introduction of Erythraean species. The rate of recording of new alien species (evaluated in decades) revealed later first local arrivals (after 1900) than those observed for other eastern Mediterranean shores, while the peak in records in conjunc- tion with our samplings (1991 to 2010) emphasizes the need for increased field work to monitor their arrival and establishment. -
Genetic Characterisation of Oyster Populations Along the North-Eastern
African Journal of Marine Science Archimer December 2008, Volume 30, Number 3, Pages 489- http://archimer.ifremer.fr 495 http://dx.doi.org/10.2989/AJMS.2008.30.3.4.638 © 2008 NISC, Taylor & Francis ailable on the publisher Web site Genetic characterisation of oyster populations along the north-eastern coast of Tunisia S. Dridi1, 2, *, M. S. Romdhane2, S. Heurtebise3, M. El Cafsi1, P. Boudry3 and S. Lapègue4 1 Faculté des Sciences de Tunis, Département de Biologie, Unité de Physiologie et d’Ecophysiologie des Organismes Aquatiques, Campus Universitaire El Manar II, 2092 Tunis, Tunisia 2 blisher-authenticated version is av Institut National Agronomique de Tunis, Département des Sciences de la Production Animale et de la Pêche, Unité d’écosystèmes et ressources aquatiques, 43 Av. Charles Nicole, 1082 Tunis, Tunisia 3 Ifremer, UMR M100 Physiologie et Ecophysiologie des Mollusques Marins, 29280 Plouzané, France 4 Laboratoire Ifremer de Génétique et Pathologie, 17390 La Tremblade, France *: Corresponding author : S Dridi, email address : [email protected] Abstract: The taxonomy of oysters has been traditionally based on characteristics of the shell. More recently, the analysis of protein and DNA polymorphism has provided a means to overcome difficulties in distinguishing the different species of oysters based solely on shell morphology. In order to identify oysters of the Tunisian north-east coast, we sequenced a 16S rRNA mitochondrial fragment from 68 oysters sampled from the Bizert Lagoon and the Gulf of Hammamet in northern Tunisia. Comparison of oyster 16S rRNA sequences available in GenBank showed the presence of both Ostreola stentina and Crassostrea gigas in our samples, which could not be detected on the basis of shell morphology only. -
Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora)
Gulf of Mexico Science Volume 34 Article 4 Number 1 Number 1/2 (Combined Issue) 2018 Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution Martha Reguero Universidad Nacional Autónoma de México Andrea Raz-Guzmán Universidad Nacional Autónoma de México DOI: 10.18785/goms.3401.04 Follow this and additional works at: https://aquila.usm.edu/goms Recommended Citation Reguero, M. and A. Raz-Guzmán. 2018. Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution. Gulf of Mexico Science 34 (1). Retrieved from https://aquila.usm.edu/goms/vol34/iss1/4 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf of Mexico Science by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Reguero and Raz-Guzmán: Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Lagu Gulf of Mexico Science, 2018(1), pp. 32–55 Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution MARTHA REGUERO AND ANDREA RAZ-GUZMA´ N Molluscs were collected in Laguna Madre from seagrass beds, macroalgae, and bare substrates with a Renfro beam net and an otter trawl. The species list includes 96 species and 48 families. Six species are dominant (Bittiolum varium, Costoanachis semiplicata, Brachidontes exustus, Crassostrea virginica, Chione cancellata, and Mulinia lateralis) and 25 are commercially important (e.g., Strombus alatus, Busycoarctum coarctatum, Triplofusus giganteus, Anadara transversa, Noetia ponderosa, Brachidontes exustus, Crassostrea virginica, Argopecten irradians, Argopecten gibbus, Chione cancellata, Mercenaria campechiensis, and Rangia flexuosa). -
Phylogeographic Study of the Dwarf Oyster, Ostreola Stentina
Marine Biology Archimer, archive institutionnelle de l’Ifremer Volume 150, Number 1, October 2006 http://www.ifremer.fr/docelec/ http://dx.doi.org/10.1007/s00227-006-0333-1 ©2006 Springer Science+Business Media The original publication is available at http://www.springerlink.com ailable on the publisher Web site Phylogeographic study of the dwarf oyster, Ostreola stentina, from Morocco, Portugal and Tunisia: evidence of a geographic disjunction with the closely related taxa, Ostrea aupouria and Ostreola equestris Sylvie Lapègue1, Inès Ben Salah2, Frederico M. Batista3, 4, Serge Heurtebise1, Lassad Neifar2 and Pierre Boudry1 (1) Laboratoire de Génétique et Pathologie, IFREMER, 17390 La Tremblade, France blisher-authenticated version is av (2) Faculté des Sciences de Sfax, Laboratoire d’écobiologie Animale, BP 802, 3038 Sfax, Tunisia (3) Instituto Nacional de Investigação Agrária e das Pescas (INIAP/IPIMAR), CRIPSul, Av. 5 de Outubro, 8700-305 Olhao, Portugal (4) Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, Largo Prof. Abel Salazar, 2, 4099-003 Porto, Portugal Corresponding author : [email protected] Abstract: Despite the economic importance of oysters due to the high aquaculture production of several species, the current knowledge of oyster phylogeny and systematics is still fragmentary. In Europe, Ostrea edulis, the European flat oyster, and Ostreola stentina, the Provence oyster or dwarf oyster, are both present along the European and African, Atlantic and Mediterranean, coasts. In order to document the relationship not only between O. stentina and O. edulis, but also with the other Ostrea and Ostreola species, we performed a sequence analysis of the 16S mitochondrial fragment (16S rDNA: the large subunit rRNA-coding gene) and the COI fragment (COI: cytochrome oxidase subunit I). -
Community Structure of a Molluscan Assemblage in an Anthropized Environment, Hammamet Marina, North-Eastern Tunisia
www.trjfas.org ISSN 1303-2712 Turkish Journal of Fisheries and Aquatic Sciences 15: 751-760 (2015) DOI: 10.4194/1303-2712-v15_3_20 Community Structure of a Molluscan Assemblage in an Anthropized Environment, Hammamet Marina, North-Eastern Tunisia 1,* 2,3 1 Refka Elgharsalli , Lotfi Rabaoui , Nejla Aloui-Bejaoui 1 Institut National Agronomique de Tunisie, 43, Avenue Charles Nicolle, 1082 Tunis, Tunisia. 2 University of Tunis, Research Unit of Integrative Biology and Evolutionary and Functional Ecology of Aquatic Systems, Faculty of Science of Tunis, 2092, El Manar, Tunisia. 3 University of Gabes, Higher Institute of Applied Biology of Medenine, El Jorf Street Km 22.5 – 4119 Medenine, Tunisia * Corresponding Author: Tel.: +21.620 951116 Received 26 December 2014 E-mail: [email protected] Accepted 21 October 2015 Abstract Hammamet Marina is the most important touristic port in the Gulf of Hammamet (Tunisia). The present work is a contribution to the knowledge of the functional diversity and structure of the malacofauna community in this area. Three different stations (A, B and C) within the port were sampled seasonally for a year (2005-2006). The mollusc assemblage studied was represented by 14 species (in totally 2669 ind. were found). Among the four mollusc classes recorded, bivalves were the best represented (73.76% of the total number species), followed by gastropods (22.02%), cephalopods (2.42%) and polyplacophores (1.80%). Atlanto-Mediterranean (42.85%) and Endemic Mediterranean (39.28%) taxa prevailed in the community, followed by Indo-Pacific (7.14%) and cosmopolitan species (3.57%). A clear spatial zonation was distinguished. The station B hosted the highest abundance of gastropods (309±19.92 ind. -
The Last Alien Reaching Sicily: Isognomon Legumen (Gmelin, 1791) (Mollusca Bivalvia Isognomonidae)
Biodiversity Journal, 2019, 10 (4): 337–342 https://doi.org/10.31396/Biodiv.Jour.2019.10.4.337.342 The last alien reaching Sicily: Isognomon legumen (Gmelin, 1791) (Mollusca Bivalvia Isognomonidae) Danilo Scuderi1 & Alfio Viola2 1I.I.S.S. “E. Majorana”, via L. Capuana 36, 95048 Scordia, Catania, Italy: [email protected] 2Dipartimento di Scienze Biologiche, Geologiche ed Ambientali, Sezione di Scienze della Terra, Palazzo Ramondetta, Corso Italia 57, Catania, Italy; e-mail: [email protected] ABSTRACT The finding of some living specimens of an alien bivalve of the genus Isognomon Lightfoot, 1786 (Mollusca Bivalvia Isognomonidae) attached to rocks is here reported in Sicily for the first time. This is the last of a series of numerous finding of alien molluscs reports in the same area, for which a human-mediated model was supposed. An attempt to indicate the age of the specimens are here furnished on the basis of the number of byssus filaments. Some further environmental notes underline how in recent times these alien species seem better integrated inside the indigenous benthic communities in the Southern Mediterranean coasts, being better allowed in the first settlement by the recent climatic changes and resulting ecologically well organized and structured as in the tropical environments of provenance. KEY WORDS Alien species; Mediterranean; invasive species; Sicily; Bivalves; Mollusca; Isognomon. Received 13.09.2019; accepted 21.11.2019; published online 11.12.2019 INTRODUCTION ships, whose traffic is more increased today (Zibro- wius, 1992). Due to the high increased number of alien spe- In the Mediterranean Sea two species of Isogno- cies signalled in the Mediterranean Sea, in the last mon Lightfoot, 1786 (Mollusca Bivalvia Isogno- decades the tropicalization in marine environments monidae) are reported: I. -
Understanding the Origins, Dispersal, and Evolution of Bonamia Species (Phylum Haplosporidia) Based on Genetic Analyses of Ribosomal RNA Gene Regions
W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2011 Understanding the Origins, Dispersal, and Evolution of Bonamia Species (Phylum Haplosporidia) Based on Genetic Analyses of Ribosomal RNA Gene Regions Kristina M. Hill College of William and Mary - Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Developmental Biology Commons, Evolution Commons, and the Molecular Biology Commons Recommended Citation Hill, Kristina M., "Understanding the Origins, Dispersal, and Evolution of Bonamia Species (Phylum Haplosporidia) Based on Genetic Analyses of Ribosomal RNA Gene Regions" (2011). Dissertations, Theses, and Masters Projects. Paper 1539617909. https://dx.doi.org/doi:10.25773/v5-a0te-9079 This Thesis is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Understanding the Origins, Dispersal, and Evolution of Bonamia Species (Phylum Haplosporidia) Based on Genetic Analyses of Ribosomal RNA Gene Regions A Thesis Presented to The Faculty of the School of Marine Science The College of William and Mary in Virginia In Partial Fulfillment of the Requirements for the Degree of Master of Science by Kristina M. Hill 2011 APPROVAL SHEET This thesis is submitted in partial fulfillment of the requirements for the degree of Master of Science CH-s 7n - "UuUL ' Kristina Marie Hill Approved, May 2011 w. n Eugene M. Burreson, Ph.D Advisor Kimberly S. Reece, Ph.D. -
Describing Species
DESCRIBING SPECIES Practical Taxonomic Procedure for Biologists Judith E. Winston COLUMBIA UNIVERSITY PRESS NEW YORK Columbia University Press Publishers Since 1893 New York Chichester, West Sussex Copyright © 1999 Columbia University Press All rights reserved Library of Congress Cataloging-in-Publication Data © Winston, Judith E. Describing species : practical taxonomic procedure for biologists / Judith E. Winston, p. cm. Includes bibliographical references and index. ISBN 0-231-06824-7 (alk. paper)—0-231-06825-5 (pbk.: alk. paper) 1. Biology—Classification. 2. Species. I. Title. QH83.W57 1999 570'.1'2—dc21 99-14019 Casebound editions of Columbia University Press books are printed on permanent and durable acid-free paper. Printed in the United States of America c 10 98765432 p 10 98765432 The Far Side by Gary Larson "I'm one of those species they describe as 'awkward on land." Gary Larson cartoon celebrates species description, an important and still unfinished aspect of taxonomy. THE FAR SIDE © 1988 FARWORKS, INC. Used by permission. All rights reserved. Universal Press Syndicate DESCRIBING SPECIES For my daughter, Eliza, who has grown up (andput up) with this book Contents List of Illustrations xiii List of Tables xvii Preface xix Part One: Introduction 1 CHAPTER 1. INTRODUCTION 3 Describing the Living World 3 Why Is Species Description Necessary? 4 How New Species Are Described 8 Scope and Organization of This Book 12 The Pleasures of Systematics 14 Sources CHAPTER 2. BIOLOGICAL NOMENCLATURE 19 Humans as Taxonomists 19 Biological Nomenclature 21 Folk Taxonomy 23 Binomial Nomenclature 25 Development of Codes of Nomenclature 26 The Current Codes of Nomenclature 50 Future of the Codes 36 Sources 39 Part Two: Recognizing Species 41 CHAPTER 3. -
“Diversity and Specificity of the Marine Sponge Microbiome As Inspected by Next Generation Sequencing”
“DIVERSITY AND SPECIFICITY OF THE MARINE SPONGE MICROBIOME AS INSPECTED BY NEXT GENERATION SEQUENCING” André Rodrigues Soares Mestrado em Biologia Molecular e Microbiana Trabalho efetuado sob a orientação de: Dr. Rodrigo da Silva Costa Prof.ª Dr.ª Maria Margarida dos Prazeres Reis 2015 Acknowledgements For the completion of the present work, the support of the Microbial Ecology and Evolution (MicroEcoEvo) research group at the CCMAR was crucial. Firstly, I thank Rodrigo Costa, my supervisor, who drew me into the field of microbial ecology of marine sponges and posed me the great challenge of tackling the EMP dataset. Furthermore, I am thankful for all the enthusiasm and opportunities provided and for the immense patience! Gianmaria Califano, now in Jena, Austria, and Asunción Lago- Lestón dispensed precious time and patience in the starting phase of this thesis. I further thank Elham Karimi for the help in the laboratory and for our relaxing coffee talks! Tina Keller-Costa, Telma Franco and more recently Miguel Ramos, along with the abovementioned, are all part of the MicroEcoEvo team, to whom I thank for a wonderful first medium-term experience in a laboratory! I admittedly started my Biology Bsc. at the University of Algarve not being fond of any biological entity smaller than 2cm. It was Prof. Margarida Reis (Microbial and Molecular Ecology Laboratory, CIMA, UAlg) who showed me that ‘microbes can do anything’ and went on to accepting the challenge of supervising my Bsc. Technical and Scientific Project. I therefore thank her for introducing me to Microbiology in the best way possible. For the completeness of this work, Lucas Moitinho-Silva (currently at the University of South Wales, Australia), was essential in introducing me to R scripting whilst finishing his PhD at Wüezburg University, Germany. -
Life-History Traits of a Common Caribbean Coral-Excavating Sponge, Cliona Tenuis (Porifera: Hadromerida) Manuel González-Riveroa,B,G*, Alexander V
Journal of Natural History, 2013 http://dx.doi.org/10.1080/00222933.2013.802042 Life-history traits of a common Caribbean coral-excavating sponge, Cliona tenuis (Porifera: Hadromerida) Manuel González-Riveroa,b,g*, Alexander V. Ereskovskyc , Christine H. L. Schönbergd , Renata Ferrarie,g, Jane Fromonte and Peter J. Mumbyb,g aCoral Reefs Ecosystems Laboratory, School of Biological Sciences, The University of Queensland. St Lucia campus, Brisbane. Qld 4072. Australia; bCollege of Life and Environmental Sciences, University of Exeter, Exeter, United Kingdom; cInstitut Méditerranéen de Biodiversité et d’Ecologie marine et continentale (IMBE), CNRS, Aix-Marseille Université, Marseille, France; dAustralian Institute of Marine Science, Oceans Institute at The University of Western Australia, Crawley, Australia; eCoastal & Marine Ecology Group, School of Biological Sciences, The University of Sydney, Australia; fWestern Australian Museum, Welshpool, Australia; gMarine Spatial Ecology Lab, School of Biological Sciences, University of Queensland. St Lucia Campus, Brisbane. Qld 4072. Australia (Received 3 June 2012; final version received 15 April 2013) Clionaids are important competitors and bio-eroding agents on coral reefs; how- ever, little is known of their biology. We studied aspects of life history of Cliona tenuis, in particular its sexual reproduction and growth. Temporal variations in these traits were studied over a year, in correlation with water temperature as a proxy for seasonality. Growth and sexual reproduction occurred at separate times and followed intra-annual variations in temperature. Growth increased during the warmest months of the year, reaching an average rate of 29.9 ± 6.7 mm dur- ing 286 days. Cliona tenuis is oviparous, and the results suggest gonochorism. -
Del Puerto a Las Aguas De Lastre: Aplicación Del “Metabarcoding” De ADN Para El Monitoreo De La Biodiversidad Introducida Por El Transporte Marítimo
Departamento de Bioquímica y Biología Molecular Programa de Doctorado en Biología Molecular y Celular Del puerto a las aguas de lastre: aplicación del “metabarcoding” de ADN para el monitoreo de la biodiversidad introducida por el transporte marítimo From port to ballast water: application of DNA metabarcoding for the monitoring of ship-borne biodiversity Tesis Doctoral Anaïs Rey 2019 RESUMEN DEL CONTENIDO DE TESIS DOCTORAL 1.- Título de la Tesis Español/Otro Idioma: Inglés: Del puerto a las aguas de lastre: aplicación del From port to ballast water: “metabarcoding” de ADN para el monitoreo de application of DNA metabarcoding for the la biodiversidad introducida por el transporte monitoring of ship-borne biodiversity marítimo 2.- Autor Nombre: DNI/Pasaporte/NIE: Anaïs Rey Programa de Doctorado: Programa de Doctorado Biología Molecular y Celular Órgano responsable: Centro Internacional de postgrado RESUMEN (en español) El transporte marítimo es uno de los vectores más importantes en la introducción y dispersión de especies alóctonas, algas tóxicas y patógenos al rededor del mundo. (Reg.2018) Miles de organismos, de gran diversidad son transportados diariamente en tanques de 010 - agua de lastre o incrustados en el casco de buques y acaban siendo liberados en VOA puertos o en nuevos entornos. Estos puertos a menudo proporcionan hábitats - adecuados para el asentamiento de especies y se consideran "puntos calientes" en la MAT - introducción de especies alóctonas. El Convenio Internacional para el Control y la Gestión del Agua de Lastre y los Sedimentos de los buques (Convenio BWM) que FOR desde el 2017 está vigente, se adoptó el 2004 con el fin de prevenir, reducir y controlar la introducción de especies alóctonas transportadas por las aguas de lastre. -
A New Clionaid Sponge Infests Live Corals on the West Coast of India (Porifera,
Formatted ... Author Version : Systematics and Biodiversity, vol.17(2); 2019; 190-206 Formatted ... Formatted A new clionaid sponge infests live corals on the west coast of India (Porifera, ... Demospongiae, Clionaida) Formatted ... Formatted ... Formatted ... Sambhaji Mote1, Christine H.L. Schönberg2, Toufiek Samaai3,4, Vishal Gupta1, Baban Ingole*1 Formatted ... Formatted ... 1 CSIR–National Institute of Oceanography, Dona Paula, Goa, India Formatted ... 2 School of Earth and Environment and Oceans Institute, Indian Ocean Marine Research Centre, the Formatted ... University of Western Australia, Fairway Entrance 4, Crawley, WA 6009, Australia Formatted ... 3 Department of Environmental Affairs, Oceans and Coasts Branch, Oceans and Coasts Research Formatted ... Chief Directorate, Marine Biodiversity and Ecosystem Research Directorate, Private Bag X2, Formatted ... Roggebaai, 8012, Cape Town, Western Cape, South Africa. Formatted ... 4Marine Research Institute (MA-RE), University of Cape Town, Private Bag X3, Rondebosch, 7701, Formatted Cape Town, South Africa ... Formatted (*Corresponding author: [email protected]) ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted ... Formatted