Downloaded from genome.cshlp.org on September 27, 2021 - Published by Cold Spring Harbor Laboratory Press Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus David A. Raya*†, Cedric Feschotteb†, Heidi J. T. Pagana, Jeremy D. Smitha, Ellen Prithamb, Peter Arensburgerc, Peter W. Atkinsonc, and Nancy L. Craigd a – Department of Biology, West Virginia University, 53 Campus Dr., Morgantown, WV 26506 b – Department of Biology, University of Texas at Arlington, Arlington, TX 76019 c - Department of Entomology and Institute for Integrative Genome Biology, University of California, Riverside, CA 92521. d – Howard Hughes Medical Institute, 502 PCTB, 725 North Wolfe Street, Baltimore, MD 21205. * - Address for correspondence and reprints: Dr. David A. Ray, Department of Biology, West Virginia University, 53 Campus Dr., Morgantown, WV 26506, Phone: (304) 293- 5201, Fax (304) 293-6363, E-mail:
[email protected] † - These authors contributed equally to this manuscript and should be considered co-first authors. Running Title: Waves of DNA transposon activity in bats Keywords: Mobile element, transposon, transposase, Chiroptera, genome evolution Abbreviations: TSD – target site duplication, TIR – terminal inverted repeat, hAT – hobo/Activator/TAM, My: million years; Mya: million years ago Downloaded from genome.cshlp.org on September 27, 2021 - Published by Cold Spring Harbor Laboratory Press Ray et al. - Transposons in Myotis lucifugus Abstract DNA transposons, or class 2 transposable elements, have successfully propagated in a wide variety of genomes. However, it is widely believed that DNA transposon activity has ceased in mammalian genomes for at least the last 40 My. We recently reported evidence for the relatively recent activity of hAT and Helitron elements, two distinct groups of DNA transposons, in the lineage of the vespertilionid bat Myotis lucifugus.