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Molecular Systematics of Freshwater Diaptomid Species of the Genus Neodiaptomus from Andaman Islands, India
www.genaqua.org ISSN 2459-1831 Genetics of Aquatic Organisms 2: 13-22 (2018) DOI: 10.4194/2459-1831-v2_1_03 RESEARCH PAPER Molecular Systematics of Freshwater Diaptomid Species of the Genus Neodiaptomus from Andaman Islands, India B. Dilshad Begum1, G. Dharani2, K. Altaff3,* 1 Justice Basheer Ahmed Sayeed College for Women, P. G. & Research Department of Zoology, Teynampet, Chennai - 600 018, India. 2 Ministry of Earth Sciences, Earth System Science Organization, National Institute of Ocean Technology, Chennai - 600 100, India. 3 AMET University, Department of Marine Biotechnology, Chennai - 603112, India. * Corresponding Author: Tel.: +9444108110; Received 10 April 2018 E-mail: [email protected] Accepted 29 July 2018 Abstract Calanoid copepods belonging to the family Diaptomidae occur commonly and abundantly in different types of freshwater environment. Based on morphological taxonomic key characters 48 diaptomid species belonging to 13 genera were reported from India. Taxonomic discrimination of many species of these genera is difficult due to their high morphological similarities and minute differences in key characters. In the present study two species of the genus, Neodiaptomus, N. meggiti and N. schmackeri from Andaman Islands were examined based on morphological and molecular characters which showed low variation in morphology and differences in their distributions. The morphological taxonomy of Copepoda with genetic analysis has shown complementing values in understanding the genetic variation and phylogeny of the contemporary populations. In this study, a molecular phylogenetic analysis of N. meggiti and N. schmackeri is performed on the basis of mitochondrial Cytochrome c oxidase subunit I (COI) gene. The mtDNA COI sequence of N. meggiti and N. -
New and Previously Known Species of Copepoda and Cladocera (Crustacea) from Svalbard, Norway – Who Are They and Where Do They Come From?
Fauna norvegica 2018 Vol. 38: 18–29. New and previously known species of Copepoda and Cladocera (Crustacea) from Svalbard, Norway – who are they and where do they come from? Inta Dimante-Deimantovica1,4, Bjørn Walseng1, Elena S. Chertoprud2,3, and Anna A. Novichkova2,3 Dimante-Deimantovica I, Walseng B, Chertoprud ES and Novichkova A. 2018. New and previously known species of Copepoda and Cladocera (Crustacea) from Svalbard, Norway – who are they and where do they come from? Fauna norvegica 38: 18–29. Arctic landscapes are characterised by an immense number of fresh and brackish water habitats – lakes, ponds and puddles. Due to a rather harsh environment, there is a limited number of species inhabiting these ecosystems. Recent climate-driven regime shifts impact and change Arctic biological communities. New species may appear, and existing communities may become supressed or even disappear, depending on how ongoing changes match their ecological needs. This study provides data on presently existing and probably recently arrived fresh and brackish water microcrustacean species in the Norwegian High Arctic - Svalbard archipelago. The study focused on two taxonomic groups, Cladocera and Copepoda and altogether we found seven taxa new for Svalbard: Alona werestschagini, Polyphemus pediculus, Diaptomus sp., Diacyclops abyssicola, Nitokra spinipes, Epactophanes richardi and Geeopsis incisipes. Compared with an existing overview for the area, our study increased the number of species by more than 20 %, and some of the new species have never been found that far north. Finally, we present a complete and critically updated revised species list of fresh and brackish water cladocerans and copepods for Svalbard. -
Crustacean Diversity and Conservation Value Indexes in Pond Assessment: Implications for Rare and Relict Species
Limnetica, 29 (2): x-xx (2011) Limnetica, 34 (2): 333-348 (2015). DOI: 10.23818/limn.34.26 c Asociación Ibérica de Limnología, Madrid. Spain. ISSN: 0213-8409 Crustacean diversity and conservation value indexes in pond assessment: implications for rare and relict species María Sahuquillo and María Rosa Miracle Departament de Microbiologia i Ecologia, Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de València, E-46100 Burjassot, València, Spain. ∗ Corresponding author: [email protected]; [email protected] 2 Received: 09/01/2014 Accepted: 01/04/2015 ABSTRACT Crustacean diversity and conservation value indexes in pond assessment: implications for rare and relict species Ponds are important for the conservation of biodiversity. In order to safeguard them, it is essential to identify the habitats that sustain relict, rare or vulnerable species. This tactic has been utilized in communities of higher organisms but is rarely employed in pond crustacean communities, which are evaluated by species richness or diversity indexes in which all species are weighted equally. We have examined crustacean diversity in relation to environmental gradients in 150 Mediterranean ponds and propose a crustacean conservation value index (CVVI) for ponds. Under this index, species are scored based on the relictness and biogeographical significance of the taxonomic group to which they belong, as well as on their rarity or endemicity. In our study, permanent ponds showed a higher accumulated number of crustacean species than temporary ponds; however, local species richness was not consistently higher in permanent ponds, and the highest species richness was in fact found in temporary ponds. However, when ponds were subdivided by type into three groups of temporary ponds and two groups of permanent ones, species richness and diversity parameters tended to increase with an increasing degree of stability in both temporary and permanent ponds. -
A Review of Planktivorous Fishes: Their Evolution, Feeding Behaviours, Selectivities, and Impacts
Hydrobiologia 146: 97-167 (1987) 97 0 Dr W. Junk Publishers, Dordrecht - Printed in the Netherlands A review of planktivorous fishes: Their evolution, feeding behaviours, selectivities, and impacts I Xavier Lazzaro ORSTOM (Institut Français de Recherche Scientifique pour le Développement eri Coopération), 213, rue Lu Fayette, 75480 Paris Cedex IO, France Present address: Laboratorio de Limrzologia, Centro de Recursos Hidricob e Ecologia Aplicada, Departamento de Hidraulica e Sarzeamento, Universidade de São Paulo, AV,DI: Carlos Botelho, 1465, São Carlos, Sï? 13560, Brazil t’ Mail address: CI? 337, São Carlos, SI? 13560, Brazil Keywords: planktivorous fish, feeding behaviours, feeding selectivities, electivity indices, fish-plankton interactions, predator-prey models Mots clés: poissons planctophages, comportements alimentaires, sélectivités alimentaires, indices d’électivité, interactions poissons-pltpcton, modèles prédateurs-proies I Résumé La vision classique des limnologistes fut de considérer les interactions cntre les composants des écosystè- mes lacustres comme un flux d’influence unidirectionnel des sels nutritifs vers le phytoplancton, le zoo- plancton, et finalement les poissons, par l’intermédiaire de processus de contrôle successivement physiqucs, chimiques, puis biologiques (StraSkraba, 1967). L‘effet exercé par les poissons plaiictophages sur les commu- nautés zoo- et phytoplanctoniques ne fut reconnu qu’à partir des travaux de HrbáEek et al. (1961), HrbAEek (1962), Brooks & Dodson (1965), et StraSkraba (1965). Ces auteurs montrèrent (1) que dans les étangs et lacs en présence de poissons planctophages prédateurs visuels. les conimuiiautés‘zooplanctoniques étaient com- posées d’espèces de plus petites tailles que celles présentes dans les milieux dépourvus de planctophages et, (2) que les communautés zooplanctoniques résultantes, composées d’espèces de petites tailles, influençaient les communautés phytoplanctoniques. -
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................ -
Phylogenetic Analysis of 18S Rdna of Freshwater Copepods Neodiaptomus Species and Mesocyclops Species
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/313010364 Phylogenetic analysis of 18s rDNA of freshwater copepods neodiaptomus species and mesocyclops species Article in Journal of Advanced Zoology · December 2016 CITATION READS 1 202 5 authors, including: Sivakumar Kandasamy M.R Dhivya Shree Karpaga Vinayaga College of Engineering and Technology KLE Institute of Technology 27 PUBLICATIONS 80 CITATIONS 2 PUBLICATIONS 2 CITATIONS SEE PROFILE SEE PROFILE P. Muthupriya Kareem Altaff D.G.Vaishnav College AMET DEEMED TO BE UNIVERSITY 17 PUBLICATIONS 17 CITATIONS 66 PUBLICATIONS 350 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Meiofaunal studies of Palk bay sandy beaches View project Copepods View project All content following this page was uploaded by Sivakumar Kandasamy on 28 January 2017. The user has requested enhancement of the downloaded file. J. Adv. Zool. 2016: 37(2): 64-74 ISSN-0253-7214 PHYLOGENETIC ANALYSIS OF 18S rDNA OF FRESHWATER COPEPODS NEODIAPTOMUS SPECIES AND MESOCYCLOPS SPECIES K. Sivakumar1, K. Archana1, M. Shree Rama1, P. Muthupriya2 and K. Altaff3 1Department of Biotechnology Karpaga Vinayaga College of Engineering and Technology GST Road, Chinna Kolambakkam, Padalam-603 308, Kanchipuram (Dt.), India 2Department of Biotechnology DG Vaishnav College, Chennai – 600 106 3Department of Zoology The New College, Chennai-600 014 †corresponding author: [email protected] ABSTRACT: The present work is emphasized on analyzing the molecular characteristics of Mesocyclops sp. and Neodiaptomus sp. Molecular markers 18s rDNA region was used to resolve the evolutionary relationship between the species. The Mesocyclops sp. -
MIAMI UNIVERSITY the Graduate School Certificate for Approving The
MIAMI UNIVERSITY The Graduate School Certificate for Approving the Dissertation We hereby approve the Dissertation of Sandra J. Connelly Candidate for the Degree: Doctor of Philosophy __________________________________________ Director Dr. Craig E. Williamson __________________________________________ Reader Dr. Maria González __________________________________________ Reader Dr. David L. Mitchell __________________________________________ Graduate School Representative Dr. A. John Bailer ABSTRACT EFFECTS OF ULTRAVIOLET RADIATION (UVR) INDUCED DNA DAMAGE AND OTHER ECOLOGICAL DETERMINANTS ON CRYPTOSPORIDIUM PARVUM, GIARDIA LAMBLIA, AND DAPHNIA SPP. IN FRESHWATER ECOSYSTEMS Sandra J. Connelly Freshwater ecosystems are especially susceptible to climatic change, including anthropogenic-induced changes, as they are directly influenced by the atmosphere and terrestrial ecosystems. A major environmental factor that potentially affects every element of an ecosystem, directly or indirectly, is ultraviolet radiation (UVR). UVR has been shown to negatively affect the DNA of aquatic organisms by the same mechanism, formation of photoproducts (cyclobutane pyrimidine dimers; CPDs), as in humans. First, the induction of CPDs by solar UVR was quantified in four aquatic and terrestrial temperate ecosystems. Data show significant variation in CPD formation not only between aquatic and terrestrial ecosystems but also within a single ecosystem and between seasons. Second, there is little quantitative data on UV-induced DNA damage and the effectiveness of DNA repair mechanisms on the damage induced in freshwater invertebrates in the literature. The rate of photoproduct induction (CPDs) and DNA repair (photoenzymatic and nucleotide excision repair) in Daphnia following UVR exposures in artificial as well as two natural temperate lake systems was tested. The effect of temperature on the DNA repair rates, and ultimately the organisms’ survival, was tested under controlled laboratory conditions following artificial UVB exposure. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Food and Parasites – Life-History Decisions in Copepods
Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 979 Food and Parasites – Life-history Decisions in Copepods BY LENA SIVARS BECKER ACTA UNIVERSITATIS UPSALIENSIS UPPSALA 2004 ! ""# $#%"" & ' & & (' ') *' + ') , -) ""#) . ( / -&0' ) 1 ) 232) #" ) ) 4,5 2$066#0623$0# 4 ' &'+ & + & && &0' ' 0 &&) 4 & ' + & &0' 7 & ' 8 +' '' & ' + & 9 + + ' 0 &&) ' & & : + ' ; +' & + ) ' & + + & + &+ 7 '8 ' & + ' & ) + & ' ; 7 8 + ' ;) 4 +' & + '' ; + ' ;) < & ' + ; ' ' ; + & & ' & ) 4 ' & & + ' + + & + 7"0=>8) . & + ' ' ' + + & +' & + +) ? + & & & ' &0 & ' 0 & & ) *' ' & & & & ) . + + ' '' & ' & ' ' & + 9 & ) *' & & & ' + + ' &0' ) ! " &0' Macrocyclops albidus & Schistocephalus solidus # $ % & & ' & ( )* &+,-. /0 ! @ - , ""# 4,,5 $$"#0 = A 4,5 2$066#0623$0# % %%% 0# !B 7' %CC ))C D E % %%% 0# !B8 ! I. " # $ "% Macrocyclops albidus ' ( ! I. " # $ ' ( " # $ ! I. -
Limnological Study of Lake Tanganyika, Africa with Special Emphasis on Piscicultural Potentiality Lambert Niyoyitungiye
Limnological Study of Lake Tanganyika, Africa with Special Emphasis on Piscicultural Potentiality Lambert Niyoyitungiye To cite this version: Lambert Niyoyitungiye. Limnological Study of Lake Tanganyika, Africa with Special Emphasis on Piscicultural Potentiality. Biodiversity and Ecology. Assam University Silchar (Inde), 2019. English. tel-02536191 HAL Id: tel-02536191 https://hal.archives-ouvertes.fr/tel-02536191 Submitted on 9 Apr 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. “LIMNOLOGICAL STUDY OF LAKE TANGANYIKA, AFRICA WITH SPECIAL EMPHASIS ON PISCICULTURAL POTENTIALITY” A THESIS SUBMITTED TO ASSAM UNIVERSITY FOR PARTIAL FULFILLMENT OF THE REQUIREMENT FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN LIFE SCIENCE AND BIOINFORMATICS By Lambert Niyoyitungiye (Ph.D. Registration No.Ph.D/3038/2016) Department of Life Science and Bioinformatics School of Life Sciences Assam University Silchar - 788011 India Under the Supervision of Dr.Anirudha Giri from Assam University, Silchar & Co-Supervision of Prof. Bhanu Prakash Mishra from Mizoram University, Aizawl Defence date: 17 September, 2019 To Almighty and merciful God & To My beloved parents with love i MEMBERS OF EXAMINATION BOARD iv Contents Niyoyitungiye, 2019 CONTENTS Page Numbers CHAPTER-I INTRODUCTION .............................................................. 1-7 I.1 Background and Motivation of the Study .......................................... -
A New Species of Pseudodiaptomus
PROCEEDINGS OF THE BIOLOGICAL SOCIETY OF WASHINGTON 119(2):202–221. 2006. A new species of Pseudodiaptomus (Crustacea: Copepoda: Calanoida) from the Philippines, with a key to pseudodiaptomids from the Philippines and comments on the status of the genus Schmackeria T. Chad Walter, Susumu Ohtsuka, and Lourdes V. Castillo (TCW) National Museum of Natural History, Smithsonian Institution, P.O. Box 37012, Washington, D.C., 20013-7012, U.S.A., e-mail: [email protected]; (SO) Takehara Marine Science Station, Graduate School of Biosphere Science, Hiroshima University, 5-8-1 Minato-machi, Takehara, Hiroshima 725-0024, Japan, e-mail: [email protected]; (LC) Institute of Biological Science, University of the Philippines, Los Banyos, College, Laguna 4031, Philippines, e-mail: [email protected] Abstract.—Four species of the demersal calanoid copepod genus Pseudodiaptomus were collected from Panay Island, Philippines in September 2003. They represented three species groups (sensu Walter 1986a): P. terazakii, a new species, and P. annandalei (Lobus group), P. bispinosus (Hyalinus group), and P. clevei (Nudus group). The female of the new species differs from its congeners in the possession of 3 pairs of anterolateral spines on the genital double-somite. The male is distinguished by the fifth leg right endopod, which is bifid at its apex, and the left non- bifid endopod. A key to the 14 pseudodiaptomid species known from the Philippines is provided herein. A review of the genus Schmackeria Poppe & Richard (1890) is presented, and all species attributed to this genus are merged into the genus Pseudodiaptomus. Because many new species of Pseudodiaptomus have been described recently, a revised key to the species- groups of Walter (1986a) is presented. -
Wisconsin's Strategy for Wildlife Species of Greatest Conservation Need
Prepared by Wisconsin Department of Natural Resources with Assistance from Conservation Partners Natural Resources Board Approved August 2005 U.S. Fish & Wildlife Acceptance September 2005 Wisconsin’s Strategy for Wildlife Species of Greatest Conservation Need Governor Jim Doyle Natural Resources Board Gerald M. O’Brien, Chair Howard D. Poulson, Vice-Chair Jonathan P Ela, Secretary Herbert F. Behnke Christine L. Thomas John W. Welter Stephen D. Willet Wisconsin Department of Natural Resources Scott Hassett, Secretary Laurie Osterndorf, Division Administrator, Land Paul DeLong, Division Administrator, Forestry Todd Ambs, Division Administrator, Water Amy Smith, Division Administrator, Enforcement and Science Recommended Citation: Wisconsin Department of Natural Resources. 2005. Wisconsin's Strategy for Wildlife Species of Greatest Conservation Need. Madison, WI. “When one tugs at a single thing in nature, he finds it attached to the rest of the world.” – John Muir The Wisconsin Department of Natural Resources provides equal opportunity in its employment, programs, services, and functions under an Affirmative Action Plan. If you have any questions, please write to Equal Opportunity Office, Department of Interior, Washington D.C. 20240. This publication can be made available in alternative formats (large print, Braille, audio-tape, etc.) upon request. Please contact the Wisconsin Department of Natural Resources, Bureau of Endangered Resources, PO Box 7921, Madison, WI 53707 or call (608) 266-7012 for copies of this report. Pub-ER-641 2005