Sea Pens and Burrowing Megafauna
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project
High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project AEA Technology, Environment Contract: W/35/00632/00/00 For: The Department of Trade and Industry New & Renewable Energy Programme Report issued 30 August 2002 (Version with minor corrections 16 September 2002) Keith Hiscock, Harvey Tyler-Walters and Hugh Jones Reference: Hiscock, K., Tyler-Walters, H. & Jones, H. 2002. High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Report from the Marine Biological Association to The Department of Trade and Industry New & Renewable Energy Programme. (AEA Technology, Environment Contract: W/35/00632/00/00.) Correspondence: Dr. K. Hiscock, The Laboratory, Citadel Hill, Plymouth, PL1 2PB. [email protected] High level environmental screening study for offshore wind farm developments – marine habitats and species ii High level environmental screening study for offshore wind farm developments – marine habitats and species Title: High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Contract Report: W/35/00632/00/00. Client: Department of Trade and Industry (New & Renewable Energy Programme) Contract management: AEA Technology, Environment. Date of contract issue: 22/07/2002 Level of report issue: Final Confidentiality: Distribution at discretion of DTI before Consultation report published then no restriction. Distribution: Two copies and electronic file to DTI (Mr S. Payne, Offshore Renewables Planning). One copy to MBA library. Prepared by: Dr. K. Hiscock, Dr. H. Tyler-Walters & Hugh Jones Authorization: Project Director: Dr. Keith Hiscock Date: Signature: MBA Director: Prof. S. Hawkins Date: Signature: This report can be referred to as follows: Hiscock, K., Tyler-Walters, H. -
The Role of Neaxius Acanthus
Wattenmeerstation Sylt The role of Neaxius acanthus (Thalassinidea: Strahlaxiidae) and its burrows in a tropical seagrass meadow, with some remarks on Corallianassa coutierei (Thalassinidea: Callianassidae) Diplomarbeit Institut für Biologie / Zoologie Fachbereich Biologie, Chemie und Pharmazie Freie Universität Berlin vorgelegt von Dominik Kneer Angefertigt an der Wattenmeerstation Sylt des Alfred-Wegener-Instituts für Polar- und Meeresforschung in der Helmholtz-Gemeinschaft In Zusammenarbeit mit dem Center for Coral Reef Research der Hasanuddin University Makassar, Indonesien Sylt, Mai 2006 1. Gutachter: Prof. Dr. Thomas Bartolomaeus Institut für Biologie / Zoologie Freie Universität Berlin Berlin 2. Gutachter: Prof. Dr. Walter Traunspurger Fakultät für Biologie / Tierökologie Universität Bielefeld Bielefeld Meinen Eltern (wem sonst…) Table of contents 4 Abstract ...................................................................................................................................... 6 Zusammenfassung...................................................................................................................... 8 Abstrak ..................................................................................................................................... 10 Abbreviations ........................................................................................................................... 12 1 Introduction .......................................................................................................................... -
Studies of a Goneplax Rhomboides Population Off Quarry Bay 55
Studies of a Goneplax rhomboides population off Quarry Bay R. J. A. ATKINSON Dept of Marine Biology, University of Liverpool, Isle of Man Present address: University Marine Biological Station, Millport, Isle of Cumbrae, Scotland. Introduction This work was conducted during a course in sublittoral marine ecology sponsored by the Lundy Field Society and the Department of Marine Biology, University College of North Wa les, Menai Bridge, Anglesey. The observations reported here result from a team effort in volving Mr. A.R. Andrews, Miss M. Cooper, Mr. J. Creak, Mr. M. Davies, Dr. P.M. Hardy , Mr. J.B . Markham , Mr . C. Roberts, Mr. D. Tierney, Mr. J.G. Wilson and myself. The main objects of the exercise were to familiarise ourselves with various types of burows in the mud and employ a number of techniques to study them. This involved the preparation of polyester resin casts of selected burrows, mapping the distribution of burrows and observing the area by night as well as by day. Although Goneplax rhomboides (L.) was responsible for must of the conspicuous burrows in the area several distinctive burrows occupied by the Red Band Fish (Cepola rnbescens L.) were fou nd .. The squat lobster Munida bamffica (Pennant) was occasionally seen in th e en trances of burrows but these burrows appeared to be vacated Goneplax burrows. Methods A 48 metre tape measure was pinned into the mud substratum 17m below C.D. off Quarry Bay. Those burrows that occurred within lm either side of the tape were mapped using pencils on prepared perspex 'slates'. Interrelationships between holes in th e mud we re ascertained by creating a current of water in the burrow and noting those openings through which mud clouds emerged. -
Checklists of Crustacea Decapoda from the Canary and Cape Verde Islands, with an Assessment of Macaronesian and Cape Verde Biogeographic Marine Ecoregions
Zootaxa 4413 (3): 401–448 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2018 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4413.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:2DF9255A-7C42-42DA-9F48-2BAA6DCEED7E Checklists of Crustacea Decapoda from the Canary and Cape Verde Islands, with an assessment of Macaronesian and Cape Verde biogeographic marine ecoregions JOSÉ A. GONZÁLEZ University of Las Palmas de Gran Canaria, i-UNAT, Campus de Tafira, 35017 Las Palmas de Gran Canaria, Spain. E-mail: [email protected]. ORCID iD: 0000-0001-8584-6731. Abstract The complete list of Canarian marine decapods (last update by González & Quiles 2003, popular book) currently com- prises 374 species/subspecies, grouped in 198 genera and 82 families; whereas the Cape Verdean marine decapods (now fully listed for the first time) are represented by 343 species/subspecies with 201 genera and 80 families. Due to changing environmental conditions, in the last decades many subtropical/tropical taxa have reached the coasts of the Canary Islands. Comparing the carcinofaunal composition and their biogeographic components between the Canary and Cape Verde ar- chipelagos would aid in: validating the appropriateness in separating both archipelagos into different ecoregions (Spalding et al. 2007), and understanding faunal movements between areas of benthic habitat. The consistency of both ecoregions is here compared and validated by assembling their decapod crustacean checklists, analysing their taxa composition, gath- ering their bathymetric data, and comparing their biogeographic patterns. Four main evidences (i.e. different taxa; diver- gent taxa composition; different composition of biogeographic patterns; different endemicity rates) support that separation, especially in coastal benthic decapods; and these parametres combined would be used as a valuable tool at comparing biotas from oceanic archipelagos. -
From Ghost and Mud Shrimp
Zootaxa 4365 (3): 251–301 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2017 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4365.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:C5AC71E8-2F60-448E-B50D-22B61AC11E6A Parasites (Isopoda: Epicaridea and Nematoda) from ghost and mud shrimp (Decapoda: Axiidea and Gebiidea) with descriptions of a new genus and a new species of bopyrid isopod and clarification of Pseudione Kossmann, 1881 CHRISTOPHER B. BOYKO1,4, JASON D. WILLIAMS2 & JEFFREY D. SHIELDS3 1Division of Invertebrate Zoology, American Museum of Natural History, Central Park West @ 79th St., New York, New York 10024, U.S.A. E-mail: [email protected] 2Department of Biology, Hofstra University, Hempstead, New York 11549, U.S.A. E-mail: [email protected] 3Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia 23062, U.S.A. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 252 Introduction . 252 Methods and materials . 253 Taxonomy . 253 Isopoda Latreille, 1817 . 253 Bopyroidea Rafinesque, 1815 . 253 Ionidae H. Milne Edwards, 1840. 253 Ione Latreille, 1818 . 253 Ione cornuta Bate, 1864 . 254 Ione thompsoni Richardson, 1904. 255 Ione thoracica (Montagu, 1808) . 256 Bopyridae Rafinesque, 1815 . 260 Pseudioninae Codreanu, 1967 . 260 Acrobelione Bourdon, 1981. 260 Acrobelione halimedae n. sp. 260 Key to females of species of Acrobelione Bourdon, 1981 . 262 Gyge Cornalia & Panceri, 1861. 262 Gyge branchialis Cornalia & Panceri, 1861 . 262 Gyge ovalis (Shiino, 1939) . 264 Ionella Bonnier, 1900 . -
Part I. an Annotated Checklist of Extant Brachyuran Crabs of the World
THE RAFFLES BULLETIN OF ZOOLOGY 2008 17: 1–286 Date of Publication: 31 Jan.2008 © National University of Singapore SYSTEMA BRACHYURORUM: PART I. AN ANNOTATED CHECKLIST OF EXTANT BRACHYURAN CRABS OF THE WORLD Peter K. L. Ng Raffles Museum of Biodiversity Research, Department of Biological Sciences, National University of Singapore, Kent Ridge, Singapore 119260, Republic of Singapore Email: [email protected] Danièle Guinot Muséum national d'Histoire naturelle, Département Milieux et peuplements aquatiques, 61 rue Buffon, 75005 Paris, France Email: [email protected] Peter J. F. Davie Queensland Museum, PO Box 3300, South Brisbane, Queensland, Australia Email: [email protected] ABSTRACT. – An annotated checklist of the extant brachyuran crabs of the world is presented for the first time. Over 10,500 names are treated including 6,793 valid species and subspecies (with 1,907 primary synonyms), 1,271 genera and subgenera (with 393 primary synonyms), 93 families and 38 superfamilies. Nomenclatural and taxonomic problems are reviewed in detail, and many resolved. Detailed notes and references are provided where necessary. The constitution of a large number of families and superfamilies is discussed in detail, with the positions of some taxa rearranged in an attempt to form a stable base for future taxonomic studies. This is the first time the nomenclature of any large group of decapod crustaceans has been examined in such detail. KEY WORDS. – Annotated checklist, crabs of the world, Brachyura, systematics, nomenclature. CONTENTS Preamble .................................................................................. 3 Family Cymonomidae .......................................... 32 Caveats and acknowledgements ............................................... 5 Family Phyllotymolinidae .................................... 32 Introduction .............................................................................. 6 Superfamily DROMIOIDEA ..................................... 33 The higher classification of the Brachyura ........................ -
The Mediterranean Decapod and Stomatopod Crustacea in A
ANNALES DU MUSEUM D'HISTOIRE NATURELLE DE NICE Tome V, 1977, pp. 37-88. THE MEDITERRANEAN DECAPOD AND STOMATOPOD CRUSTACEA IN A. RISSO'S PUBLISHED WORKS AND MANUSCRIPTS by L. B. HOLTHUIS Rijksmuseum van Natuurlijke Historie, Leiden, Netherlands CONTENTS Risso's 1841 and 1844 guides, which contain a simple unannotated list of Crustacea found near Nice. 1. Introduction 37 Most of Risso's descriptions are quite satisfactory 2. The importance and quality of Risso's carcino- and several species were figured by him. This caused logical work 38 that most of his names were immediately accepted by 3. List of Decapod and Stomatopod species in Risso's his contemporaries and a great number of them is dealt publications and manuscripts 40 with in handbooks like H. Milne Edwards (1834-1840) Penaeidea 40 "Histoire naturelle des Crustaces", and Heller's (1863) Stenopodidea 46 "Die Crustaceen des siidlichen Europa". This made that Caridea 46 Risso's names at present are widely accepted, and that Macrura Reptantia 55 his works are fundamental for a study of Mediterranean Anomura 58 Brachyura 62 Decapods. Stomatopoda 76 Although most of Risso's descriptions are readily 4. New genera proposed by Risso (published and recognizable, there is a number that have caused later unpublished) 76 authors much difficulty. In these cases the descriptions 5. List of Risso's manuscripts dealing with Decapod were not sufficiently complete or partly erroneous, and Stomatopod Crustacea 77 the names given by Risso were either interpreted in 6. Literature 7S different ways and so caused confusion, or were entirely ignored. It is a very fortunate circumstance that many of 1. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism
Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism Ryutaro Goto1,2*, Tomoko Okamoto2, Hiroshi Ishikawa3, Yoichi Hamamura4, Makoto Kato2 1 Department of Marine Ecosystem Dynamics, Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba, Japan, 2 Graduate School of Human and Environmental Studies, Kyoto University, Kyoto, Japan, 3 Uwajima, Ehime, Japan, 4 Kure, Hiroshima, Japan Abstract The Echiura, or spoon worms, are a group of marine worms, most of which live in burrows in soft sediments. This annelid- like animal group was once considered as a separate phylum because of the absence of segmentation, although recent molecular analyses have placed it within the annelids. In this study, we elucidate the interfamily relationships of echiuran worms and their evolutionary pattern of feeding mode and sexual dimorphism, by performing molecular phylogenetic analyses using four genes (18S, 28S, H3, and COI) of representatives of all extant echiuran families. Our results suggest that Echiura is monophyletic and comprises two unexpected groups: [Echiuridae+Urechidae+Thalassematidae] and [Bone- lliidae+Ikedidae]. This grouping agrees with the presence/absence of marked sexual dimorphism involving dwarf males and the paired/non-paired configuration of the gonoducts (genital sacs). Furthermore, the data supports the sister group relationship of Echiuridae and Urechidae. These two families share the character of having anal chaetae rings around the posterior trunk as a synapomorphy. The analyses also suggest that deposit feeding is a basal feeding mode in echiurans and that filter feeding originated once in the common ancestor of Urechidae. Overall, our results contradict the currently accepted order-level classification, especially in that Echiuroinea is polyphyletic, and provide novel insights into the evolution of echiuran worms. -
Section 3.5 Marine Biology
3.5 MARINE BIOLOGY 3.5.1 Introduction 3.5.1.1 Definition of Resource For purposes of this EIS/OEIS, marine biological resources are defined as marine flora and fauna and habitats that they occupy, occurring within the Point Mugu Sea Range, Mugu Lagoon, and the intertidal and nearshore environment of San Nicolas Island and Point Mugu. This section specifically addresses marine invertebrates and flora. Fish and sea turtles are addressed in Section 3.6, marine mammals are addressed in Section 3.7, and seabirds are addressed in Section 3.8. Threatened and endangered species, as defined by the U.S. Fish and Wildlife Service (USFWS), are also addressed. Species that are federally listed are afforded a degree of regulatory protection, which entails a permitting process including specific mitigation measures for any allowable (incidental) impacts on the species. Species that are proposed to be listed by the USFWS are treated similarly to listed species by that agency; recommendations of the USFWS, however, are advisory rather than mandatory in the case of proposed species. A federally listed endangered species is defined as any species, including subspecies, that is “in danger of extinction throughout all or a significant portion of its range.” A federally listed threatened species is defined as any species “likely to become an endangered species within the foreseeable future throughout all or a significant portion of its range.” “Proposed” endangered or threatened species are those species for which a proposed regulation has been published in the Federal Register, but a final rule has not yet been issued. 3.5.1.2 Regional Setting The Sea Range straddles the ocean off Point Conception which is considered a major geographic feature that affects marine biological diversity. -
Soil-Dwelling Polychaetes: Enigmatic As Ever? Some Hints on Their
Contributions to Zoology, 70 (3) 127-138 (2001) SPB Academic Publishing bv, The Hague Soil-dwelling polychaetes: enigmatic as ever? Some hints on their phylogenetic relationships as suggested by a maximum parsimony analysis of 18S rRNA gene sequences ³ Emilia Rota Patrick Martin² & Christer Erséus ¹, 1 di Dipartimento Biologia Evolutivei. Universitd di Siena, via P. A. Mattioli 4. IT-53100 Siena, Italy, e-mail: 2 Institut des Sciences naturelles de des [email protected]; royal Belgique, Biologic Eaux donees, 29 rue Vautier, B-1000 e-mail: 3 Bruxelles, Belgium, [email protected]; Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden, e-mail: [email protected] Keywords: Terrestrial Polychaeta, Parergodrilus heideri, Stygocapitella subterranea, Hrabeiella I8S rRNA periglandulata, gene, molecular phylogeny, rapid radiation Abstract Collectionof new specimens 130 DNA extraction, amplification and sequencing 130 Alignment To re-evaluate 130 the various hypotheses on the systematic position of Phylogenetic analyses 130 Parergodrilus heideri Reisinger, 1925 and Hrabeiella Results 132 periglandulata Pizl & Chalupský, 1984,the sole truly terrestrial Discussion 132 non-clitellateannelidsknown to date, their phylogenetic relation- ships Acknowledgements 136 were investigated using a data set of new 18S rDNA References 136 of sequences these and other five relevant annelid taxa, including an unknown of species Ctenodrilidae, as well as homologous sequences available for 18 already polychaetes, one aphano- neuran, 11 clitellates, two pogonophorans, one echiuran, one Introduction sipunculan, three molluscs and two arthropods. Two different alignments were constructed, according to analgorithmic method terrestrial forms constitute (Clustal Truly a tiny minority W) and on the basis of a secondary structure model non-clitellate annelids, (DCSE), A maximum parsimony analysis was performed with among only represented by arthropods asan unambiguous outgroup.