Response of a Microbial Food Web to Prolonged Seasonal Hypoxia in a Boreal Lake
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Biogeography, Community Structure and Biological Habitat Types of Subtidal Reefs on the South Island West Coast, New Zealand
Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand SCIENCE FOR CONSERVATION 281 Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand Nick T. Shears SCIENCE FOR CONSERVATION 281 Published by Science & Technical Publishing Department of Conservation PO Box 10420, The Terrace Wellington 6143, New Zealand Cover: Shallow mixed turfing algal assemblage near Moeraki River, South Westland (2 m depth). Dominant species include Plocamium spp. (yellow-red), Echinothamnium sp. (dark brown), Lophurella hookeriana (green), and Glossophora kunthii (top right). Photo: N.T. Shears Science for Conservation is a scientific monograph series presenting research funded by New Zealand Department of Conservation (DOC). Manuscripts are internally and externally peer-reviewed; resulting publications are considered part of the formal international scientific literature. Individual copies are printed, and are also available from the departmental website in pdf form. Titles are listed in our catalogue on the website, refer www.doc.govt.nz under Publications, then Science & technical. © Copyright December 2007, New Zealand Department of Conservation ISSN 1173–2946 (hardcopy) ISSN 1177–9241 (web PDF) ISBN 978–0–478–14354–6 (hardcopy) ISBN 978–0–478–14355–3 (web PDF) This report was prepared for publication by Science & Technical Publishing; editing and layout by Lynette Clelland. Publication was approved by the Chief Scientist (Research, Development & Improvement Division), Department of Conservation, Wellington, New Zealand. In the interest of forest conservation, we support paperless electronic publishing. When printing, recycled paper is used wherever possible. CONTENTS Abstract 5 1. Introduction 6 2. -
Response of Marine Food Webs to Climate-Induced Changes in Temperature and Inflow of Allochthonous Organic Matter
Response of marine food webs to climate-induced changes in temperature and inflow of allochthonous organic matter Rickard Degerman Department of Ecology and Environmental Science 901 87 Umeå Umeå 2015 1 Copyright©Rickard Degerman ISBN: 978-91-7601-266-6 Front cover illustration by Mats Minnhagen Printed by: KBC Service Center, Umeå University Umeå, Sweden 2015 2 Tillägnad Maria, Emma och Isak 3 Table of Contents Abstract 5 List of papers 6 Introduction 7 Aquatic food webs – different pathways Food web efficiency – a measure of ecosystem function Top predators cause cascade effects on lower trophic levels The Baltic Sea – a semi-enclosed sea exposed to multiple stressors Varying food web structures Climate-induced changes in the marine ecosystem Food web responses to increased temperature Responses to inputs of allochthonous organic matter Objectives 14 Material and Methods 14 Paper I Paper II and III Paper IV Results and Discussion 18 Effect of temperature and nutrient availability on heterotrophic bacteria Influence of food web length and labile DOC on pelagic productivity and FWE Consequences of changes in inputs of ADOM and temperature for pelagic productivity and FWE Control of pelagic productivity, FWE and ecosystem trophic balance by colored DOC Conclusion and future perspectives 21 Author contributions 23 Acknowledgements 23 Thanks 24 References 25 4 Abstract Global records of temperature show a warming trend both in the atmosphere and in the oceans. Current climate change scenarios indicate that global temperature will continue to increase in the future. The effects will however be very different in different geographic regions. In northern Europe precipitation is projected to increase along with temperature. -
A New Type of Plankton Food Web Functioning in Coastal Waters Revealed by Coupling Monte Carlo Markov Chain Linear Inverse Metho
A new type of plankton food web functioning in coastal waters revealed by coupling Monte Carlo Markov Chain Linear Inverse method and Ecological Network Analysis Marouan Meddeb, Nathalie Niquil, Boutheina Grami, Kaouther Mejri, Matilda Haraldsson, Aurélie Chaalali, Olivier Pringault, Asma Sakka Hlaili To cite this version: Marouan Meddeb, Nathalie Niquil, Boutheina Grami, Kaouther Mejri, Matilda Haraldsson, et al.. A new type of plankton food web functioning in coastal waters revealed by coupling Monte Carlo Markov Chain Linear Inverse method and Ecological Network Analysis. Ecological Indicators, Elsevier, 2019, 104, pp.67-85. 10.1016/j.ecolind.2019.04.077. hal-02146355 HAL Id: hal-02146355 https://hal.archives-ouvertes.fr/hal-02146355 Submitted on 3 Jun 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 A new type of plankton food web functioning in coastal waters revealed by coupling 2 Monte Carlo Markov Chain Linear Inverse method and Ecological Network Analysis 3 4 5 Marouan Meddeba,b*, Nathalie Niquilc, Boutheïna Gramia,d, Kaouther Mejria,b, Matilda 6 Haraldssonc, Aurélie Chaalalic,e,f, Olivier Pringaultg, Asma Sakka Hlailia,b 7 8 aUniversité de Carthage, Faculté des Sciences de Bizerte, Laboratoire de phytoplanctonologie 9 7021 Zarzouna, Bizerte, Tunisie. -
Modeling Vitamin B1 Transfer to Consumers in the Aquatic Food Web M
www.nature.com/scientificreports OPEN Modeling vitamin B1 transfer to consumers in the aquatic food web M. J. Ejsmond 1,2, N. Blackburn3, E. Fridolfsson 2, P. Haecky3, A. Andersson4,5, M. Casini 6, A. Belgrano6,7 & S. Hylander2 Received: 10 January 2019 Vitamin B1 is an essential exogenous micronutrient for animals. Mass death and reproductive failure in Accepted: 26 June 2019 top aquatic consumers caused by vitamin B1 defciency is an emerging conservation issue in Northern Published: xx xx xxxx hemisphere aquatic ecosystems. We present for the frst time a model that identifes conditions responsible for the constrained fow of vitamin B1 from unicellular organisms to planktivorous fshes. The fow of vitamin B1 through the food web is constrained under anthropogenic pressures of increased nutrient input and, driven by climatic change, increased light attenuation by dissolved substances transported to marine coastal systems. Fishing pressure on piscivorous fsh, through increased abundance of planktivorous fsh that overexploit mesozooplankton, may further constrain vitamin B1 fow from producers to consumers. We also found that key ecological contributors to the constrained fow of vitamin B1 are a low mesozooplankton biomass, picoalgae prevailing among primary producers and low fuctuations of population numbers of planktonic organisms. Vitamin B1 (thiamin) is necessary for the proper functioning of the majority of organisms because it serves as a cofactor that associates with a number of enzymes involved in primary carbohydrate and amino acid metabo- 1 2 lism . Vitamin B1 defciency compromises mitochondrial functioning and causes nerve signaling malfunction 3 in animals . On a systemic level, low vitamin B1 levels translate into impaired health, immunosuppression and 4 reproductive failures . -
Biogeochemistry of Mediterranean Wetlands: a Review About the Effects of Water-Level Fluctuations on Phosphorus Cycling and Greenhouse Gas Emissions
water Review Biogeochemistry of Mediterranean Wetlands: A Review about the Effects of Water-Level Fluctuations on Phosphorus Cycling and Greenhouse Gas Emissions Inmaculada de Vicente 1,2 1 Departamento de Ecología, Universidad de Granada, 18071 Granada, Spain; [email protected]; Tel.: +34-95-824-9768 2 Instituto del Agua, Universidad de Granada, 18071 Granada, Spain Abstract: Although Mediterranean wetlands are characterized by extreme natural water level fluctu- ations in response to irregular precipitation patterns, global climate change is expected to amplify this pattern by shortening precipitation seasons and increasing the incidence of summer droughts in this area. As a consequence, a part of the lake sediment will be exposed to air-drying in dry years when the water table becomes low. This periodic sediment exposure to dry/wet cycles will likely affect biogeochemical processes. Unexpectedly, to date, few studies are focused on assessing the effects of water level fluctuations on the biogeochemistry of these ecosystems. In this review, we investigate the potential impacts of water level fluctuations on phosphorus dynamics and on greenhouse gases emissions in Mediterranean wetlands. Major drivers of global change, and specially water level fluctuations, will lead to the degradation of water quality in Mediterranean wetlands by increasing the availability of phosphorus concentration in the water column upon rewetting of dry sediment. CO2 fluxes are likely to be enhanced during desiccation, while inundation is likely to decrease cumulative CO emissions, as well as N O emissions, although increasing CH emissions. Citation: de Vicente, I. 2 2 4 Biogeochemistry of Mediterranean However, there exists a complete gap of knowledge about the net effect of water level fluctuations Wetlands: A Review about the Effects induced by global change on greenhouse gases emission. -
8.4 the Significance of Ocean Deoxygenation for Continental Margin Mesopelagic Communities J
8.4 The significance of ocean deoxygenation for continental margin mesopelagic communities J. Anthony Koslow 8.4 The significance of ocean deoxygenation for continental margin mesopelagic communities J. Anthony Koslow Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia and Scripps Institution of Oceanography, University of California, SD, La Jolla, CA 92093 USA. Email: [email protected] Summary • Global climate models predict global warming will lead to declines in midwater oxygen concentrations, with greatest impact in regions of oxygen minimum zones (OMZ) along continental margins. Time series from these regions indicate that there have been significant changes in oxygen concentration, with evidence of both decadal variability and a secular declining trend in recent decades. The areal extent and volume of hypoxic and suboxic waters have increased substantially in recent decades with significant shoaling of hypoxic boundary layers along continental margins. • The mesopelagic communities in OMZ regions are unique, with the fauna noted for their adaptations to hypoxic and suboxic environments. However, mesopelagic faunas differ considerably, such that deoxygenation and warming could lead to the increased dominance of subtropical and tropical faunas most highly adapted to OMZ conditions. • Denitrifying bacteria within the suboxic zones of the ocean’s OMZs account for about a third of the ocean’s loss of fixed nitrogen. Denitrification in the eastern tropical Pacific has varied by about a factor of 4 over the past 50 years, about half due to variation in the volume of suboxic waters in the Pacific. Continued long- term deoxygenation could lead to decreased nutrient content and hence decreased ocean productivity and decreased ocean uptake of carbon dioxide (CO2). -
The Potential of Mangroves in the Treatment of Shrimp Aquaculture Effluent on the Eastern Coast of Thailand
The Potential of Mangroves in the Treatment of Shrimp Aquaculture Effluent on the Eastern Coast of Thailand 7 Nina Fancy B. Sc.(Horn), Queen's University, 1999 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE in the Department of Geography O Nina Fancy, 2004 University of Victoria AII rights reserved. This thesis may not be reproduced in whole or in part, by photocopy or other means, without the permission of the author. Supervisor: Dr. Mark Flaherty ABSTRACT This thesis examines the potential of low-cost, low-maintenance mangroves in the treatment of nutrient-rich effluent originating from a shnmp fmon the coast of Thailand's Chanthaburi province. The objective of this thesis is to identify the environmental impact of shnmp aquaculture effluent and to determine if mangrove wetlands can be used as effective biofiltration areas to remove significant quantities of nitrate, ammonia and nitrite from shrimp wastewater. The study mangrove was found to remove an average of 44.5% of nitrate, 46.6% of ammonia and 59.0% of nitrite from shrimp effluent. The ratio of mangrove treatment area to shrimp fmrequired to adequately treat daily effluxes of wastewater from shrimp fmswas calculated to . be 1: 14. This ratio is significantly less spatially demanding than ratios calculated by .-: P 0 previous researchers and reveals the potential of mangroves to be used as large-scale wastewater treatment areas in shrimp-producing nations. TABLE OF CONTENTS .. ABSTRACT ..............................................................................................................11 -
Community Ecology
Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? An ecology mystery story If birds on Guam are declining due to… • hunting, then bird populations will be larger on military land where hunting is strictly prohibited. • habitat loss, then the amount of land cleared should be negatively correlated with bird numbers. • competition with introduced black drongo birds, then….prediction? • ……. come up with a different hypothesis and matching prediction! $3 million/yr Why not profitable hunting instead? (Worked for the passenger pigeon: “It was the demographic nightmare of overkill and impaired reproduction. If you’re killing a species far faster than they can reproduce, the end is a mathematical certainty.” http://www.audubon.org/magazine/may-june- 2014/why-passenger-pigeon-went-extinct) Community-wide effects of loss of birds Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? What is an ecological community? Community Ecology • Collection of populations of different species that occupy a given area. What is a community? e.g. Microbial community of one human “YOUR SKIN HARBORS whole swarming civilizations. Your lips are a zoo teeming with well- fed creatures. In your mouth lives a microbiome so dense —that if you decided to name one organism every second (You’re Barbara, You’re Bob, You’re Brenda), you’d likely need fifty lifetimes to name them all. -
Islands in the Stream 2002: Exploring Underwater Oases
Islands in the Stream 2002: Exploring Underwater Oases NOAA: Office of Ocean Exploration Mission Three: SUMMARY Discovery of New Resources with Pharmaceutical Potential (Pharmaceutical Discovery) Exploration of Vision and Bioluminescence in Deep-sea Benthos (Vision and Bioluminescence) Microscopic view of a Pachastrellidae sponge (front) and an example of benthic bioluminescence (back). August 16 - August 31, 2002 Shirley Pomponi, Co-Chief Scientist Tammy Frank, Co-Chief Scientist John Reed, Co-Chief Scientist Edie Widder, Co-Chief Scientist Pharmaceutical Discovery Vision and Bioluminescence Harbor Branch Oceanographic Institution Harbor Branch Oceanographic Institution ABSTRACT Harbor Branch Oceanographic Institution (HBOI) scientists continued their cutting-edge exploration searching for untapped sources of new drugs, examining the visual physiology of deep-sea benthos and characterizing the habitat in the South Atlantic Bight aboard the R/V Seaward Johnson from August 16-31, 2002. Over a half-dozen new species of sponges were recorded, which may provide scientists with information leading to the development of compounds used to study, treat, or diagnose human diseases. In addition, wondrous examples of bioluminescence and emission spectra were recorded, providing scientists with more data to help them understand how benthic organisms visualize their environment. New and creative Table of Contents ways to outreach and educate the public also Key Findings and Outcomes................................2 Rationale and Objectives ....................................4 -
Linking Biodiversity Above and Below the Marine Sediment–Water Interface
Articles Linking Biodiversity Above and Below the Marine Sediment–Water Interface PAUL V. R. SNELGROVE, MELANIE C. AUSTEN, GUY BOUCHER, CARLO HEIP, PATRICIA A. HUTCHINGS, GARY M. KING, ISAO KOIKE, P. JOHN D. LAMBSHEAD, AND CRAIG R. SMITH hanges in the marine environment are evident on Ca global scale (McGowan et al. 1998), and although bio- THE ORGANISMS LIVING ON THE OCEAN diversity in the oceans is poorly described, abundances and FLOOR ARE LINKED TO THOSE LIVING IN distributions of both commercially exploited (Safina 1998) and nonexploited (Pearson and Rosenberg 1978) species have THE OCEAN ABOVE, BUT WHETHER OR changed. Not only have major changes occurred but the rate of alteration of marine ecosystems appears to be accelerating HOW THE BIODIVERSITY IN THESE TWO (e.g., Cohen and Carlton 1998). Unfortunately, the impact of these changes in biodiversity on the basic functioning of ma- REALMS IS LINKED REMAINS LARGELY rine ecosystems remains uncertain, as does the oceans’ capacity UNKNOWN to withstand multiple human disturbances (Snelgrove et al. 1997). The dynamics of many marine ecosystems, as well as of important fisheries, depend on close coupling between benthic (bottom living) and pelagic (water column) organ- The sediment–water interface (SWI) in marine ecosystems isms (Steele 1974). Our knowledge of the natural history of is one of the most clearly defined ecological boundaries on these systems remains limited, and scientific interest in map- Earth. Many organisms in the water column, such as salps ping the diversity of organisms and how they live has been and jellyfish, have flimsy and attenuated morphologies that marginalized in recent years. -
Mixing Between Oxic and Anoxic Waters of the Black Sea As Traced by Chernobyl Cesium Isotopes
Deep-Sea Research, Vol 38. Suppl 2. pp S72>-S745. 1991. 019~149191 53.00 + 0.00 Pnnted 10 Great Bntam © 1991Pergamon Press pic Mixing between oxic and anoxic waters of the Black Sea as traced by Chernobyl cesium isotopes KEN O. BUESSELER, * HUGH D. LIVINGSTON* and SUSAN A. CASSO* (Received 14 August 1989; in revised form 16 November 1990; accepted 28 November 1990) Abstract-The Chernobyl nuclear power station accident in 1986 released readily measureable quantities of fallout 134CS and 137Cs to Black Sea surface waters. This pulse-like input of tracers can be used to follow the physical mixing of the surface oxic waters, now labeled with the Chemobyl tracers, and the deeper anoxic waters, which were initially Chemobyl free. By 1988, there is clear evidence of Chernobyl Cs penetration below the oxic/anoxic interface at deep water stations in the western and eastern basins of the Black Sea. This rapid penetration of surface waters across the pycnocline cannot be explained by vertical mixing processes alone. Data from profiles at the mouth of the Bosporus suggest that significant ventilation of intermediate depths can occur as the outflowmg Black Sea waters are entrained with the inflowing Mediterranean waters, forming a sub-surface water mass which is recognized by its surface water characteristics, i.e. initially a relatively high oxygen content and Chernobyl Cs signal. The lateral propagation ofthis signal along isopycnals into the basin interior would provide a rapid and effective mechanism for ventilating intermediate depths of the Black Sea. This process could also account for the lateral injection of resuspended margin sediments into the basin interior. -
Developments in Aquatic Microbiology
INTERNATL MICROBIOL (2000) 3: 203–211 203 © Springer-Verlag Ibérica 2000 REVIEW ARTICLE Samuel P. Meyers Developments in aquatic Department of Oceanography and Coastal Sciences, Louisiana State University, microbiology Baton Rouge, LA, USA Received 30 August 2000 Accepted 29 September 2000 Summary Major discoveries in marine microbiology over the past 4-5 decades have resulted in the recognition of bacteria as a major biomass component of marine food webs. Such discoveries include chemosynthetic activities in deep-ocean ecosystems, survival processes in oligotrophic waters, and the role of microorganisms in food webs coupled with symbiotic relationships and energy flow. Many discoveries can be attributed to innovative methodologies, including radioisotopes, immunofluores- cent-epifluorescent analysis, and flow cytometry. The latter has shown the key role of marine viruses in marine system energetics. Studies of the components of the “microbial loop” have shown the significance of various phagotrophic processes involved in grazing by microinvertebrates. Microbial activities and dissolved organic carbon are closely coupled with the dynamics of fluctuating water masses. New biotechnological approaches and the use of molecular biology techniques still provide new and relevant information on the role of microorganisms in oceanic and estuarine environments. International interdisciplinary studies have explored ecological aspects of marine microorganisms and their significance in biocomplexity. Studies on the Correspondence to: origins of both life and ecosystems now focus on microbiological processes in the Louisiana State University Station. marine environment. This paper describes earlier and recent discoveries in marine Post Office Box 19090-A. Baton Rouge, LA 70893. USA (aquatic) microbiology and the trends for future work, emphasizing improvements Tel.: +1-225-3885180 in methodology as major catalysts for the progress of this broadly-based field.