Genetics and Molecular Biology In Press, Accepted Manuscript Copyright © 2019, Sociedade Brasileira de Genética. DOI: http://dx.doi.org/10.1590/1678-4685-GMB-2018-0213 This manuscript has been approved and it is published as a provisional version while it is copyedit, reviewed and formatted for the final version. Araucaria angustifolia chloroplast genome sequence and its relation to other Araucariaceae José Henrique S. G. Brandão1, Nureyev F. Rodrigues2, Maria Eguiluz1, Frank Guzman2 and Rogerio Margis1,2,3 1PPGBM, Departamento de Genética, Universidade Federal do Rio Grande do Sul - UFRGS, Porto Alegre, RS, Brasil. 2PPGBCM, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul - UFRGS, Porto Alegre, RS, Brasil. 3Departamento de Biofísica, Universidade Federal do Rio Grande do Sul - UFRGS, Porto Alegre, RS, Brasil. Send correspondence to Rogerio Margis, Centro de Biotecnologia, sala 213, prédio 43431, Universidade Federal do Rio Grande do Sul – UFRGS, PO Box 15005, CEP 91501-970, Porto Alegre, RS, Brasil. Tel: 55 (51) 3308-7766 Fax: 55 (51) 3308-6072. E-mail:
[email protected] Abstract Araucaria angustifolia is endemic from southern Brazil. Known as Brazilian pine, A. angustifolia is the only native conifer species with economic/social relevance in this country. Due to massive exploitation, this species suffered significant population decline and currently is classified as critically endangered. It encouraged the scientific community to investigate genetic features in Brazilian pine to increase resources for management and preservation. In this work, RNA-Seq data was used to determine the complete nucleotide sequence of the A. angustifolia chloroplast genome (cpDNA). The cpDNA is 146,203 bp in length and contains 122 genes, including 80 protein-coding genes, 5 ribosomal RNA Ingenes, Press, and 37 tRNA genes.Accepted Coding regions compriseManuscript 45.02%; 4.96% correspond to rRNAs and tRNAs, and 50.02% of the genome encompasses non-coding regions.