Self-Compatibility Not Associated with Morphological Or Genetic Diversity Reduction in Oil-Rewarding Calceolaria Species
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Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
A New Application for Phylogenetic Marker Development Using Angiosperm Transcriptomes Author(S): Srikar Chamala, Nicolás García, Grant T
MarkerMiner 1.0: A New Application for Phylogenetic Marker Development Using Angiosperm Transcriptomes Author(s): Srikar Chamala, Nicolás García, Grant T. Godden, Vivek Krishnakumar, Ingrid E. Jordon- Thaden, Riet De Smet, W. Brad Barbazuk, Douglas E. Soltis, and Pamela S. Soltis Source: Applications in Plant Sciences, 3(4) Published By: Botanical Society of America DOI: http://dx.doi.org/10.3732/apps.1400115 URL: http://www.bioone.org/doi/full/10.3732/apps.1400115 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. ApApplicatitionsons Applications in Plant Sciences 2015 3 ( 4 ): 1400115 inin PlPlant ScienSciencesces S OFTWARE NOTE M ARKERMINER 1.0: A NEW APPLICATION FOR PHYLOGENETIC 1 MARKER DEVELOPMENT USING ANGIOSPERM TRANSCRIPTOMES S RIKAR C HAMALA 2,12 , N ICOLÁS G ARCÍA 2,3,4 * , GRANT T . G ODDEN 2,3,5 * , V IVEK K RISHNAKUMAR 6 , I NGRID E. -
Flower Food Tissues As Reward for Pollinating Birds
ISSN 0373-580 X Bol. Soc. Argent. Bot. 37 (1-2): 71 - 77. 2002 FLOWER FOOD TISSUES AS REWARD FOR POLLINATING BIRDS G. G. ROITMAN' 3, A. N. SÉRSIC23, A. A. COCUCCI2 and N. H. MONTALDO1 Summary: Nectar is the reward regularly offered by flowers to their pollinating birds. Studies on pollination by birds have focused on nectar as a reward while alternative reward systems have been poorly studied. Previous reviews have shown the presence of food tissues that serve as nutritive rewards to different classes of pollinators. However, in a recent revision of plant-bird interactions, the existence of a solid reward for birds has been disregarded. In South America at least three cases of this very particular bird-flower Interaction have been recently studied. In this paper we describe the syndrome features (flower morphology, reward properties, position of the pollination unit, flower color display and common visitors), that deviate from the typical ornithophilous syndrome, and its possible origin is discussed. Key words: Flower, food reward, pollination, birds, syndrome, review. Resumen: Tejidos alimenticios florales como recompensa para las aves polinizadoras. El néctar es la recompensa típica que las flores ofrecen a las aves polinizadoras. Los estudios sobre ornitofilia se han concentrado en el néctar como recompensa, mientras que otras retribuciones alternativas fueron esca¬ samente analizadas. Revisiones previas han mostrado que la producción de tejidos alimenticios puede servir como recompensa para diferentes polinizadores, y al menos tres casos de esta particular interacción se estudiaron últimamente en América del Sur. Sin embargo, una revisión reciente sobre interacciones planta-ave descarta la presencia de recompensas sólidas. -
Temporal and Spatial Origin of Gesneriaceae in the New World Inferred from Plastid DNA Sequences
bs_bs_banner Botanical Journal of the Linnean Society, 2013, 171, 61–79. With 3 figures Temporal and spatial origin of Gesneriaceae in the New World inferred from plastid DNA sequences MATHIEU PERRET1*, ALAIN CHAUTEMS1, ANDRÉA ONOFRE DE ARAUJO2 and NICOLAS SALAMIN3,4 1Conservatoire et Jardin botaniques de la Ville de Genève, Ch. de l’Impératrice 1, CH-1292 Chambésy, Switzerland 2Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, Rua Santa Adélia, 166, Bairro Bangu, Santo André, Brazil 3Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland 4Swiss Institute of Bioinformatics, Quartier Sorge, CH-1015 Lausanne, Switzerland Received 15 December 2011; revised 3 July 2012; accepted for publication 18 August 2012 Gesneriaceae are represented in the New World (NW) by a major clade (c. 1000 species) currently recognized as subfamily Gesnerioideae. Radiation of this group occurred in all biomes of tropical America and was accompanied by extensive phenotypic and ecological diversification. Here we performed phylogenetic analyses using DNA sequences from three plastid loci to reconstruct the evolutionary history of Gesnerioideae and to investigate its relationship with other lineages of Gesneriaceae and Lamiales. Our molecular data confirm the inclusion of the South Pacific Coronanthereae and the Old World (OW) monotypic genus Titanotrichum in Gesnerioideae and the sister-group relationship of this subfamily to the rest of the OW Gesneriaceae. Calceolariaceae and the NW genera Peltanthera and Sanango appeared successively sister to Gesneriaceae, whereas Cubitanthus, which has been previously assigned to Gesneriaceae, is shown to be related to Linderniaceae. Based on molecular dating and biogeographical reconstruction analyses, we suggest that ancestors of Gesneriaceae originated in South America during the Late Cretaceous. -
Towards Resolving Lamiales Relationships
Schäferhoff et al. BMC Evolutionary Biology 2010, 10:352 http://www.biomedcentral.com/1471-2148/10/352 RESEARCH ARTICLE Open Access Towards resolving Lamiales relationships: insights from rapidly evolving chloroplast sequences Bastian Schäferhoff1*, Andreas Fleischmann2, Eberhard Fischer3, Dirk C Albach4, Thomas Borsch5, Günther Heubl2, Kai F Müller1 Abstract Background: In the large angiosperm order Lamiales, a diverse array of highly specialized life strategies such as carnivory, parasitism, epiphytism, and desiccation tolerance occur, and some lineages possess drastically accelerated DNA substitutional rates or miniaturized genomes. However, understanding the evolution of these phenomena in the order, and clarifying borders of and relationships among lamialean families, has been hindered by largely unresolved trees in the past. Results: Our analysis of the rapidly evolving trnK/matK, trnL-F and rps16 chloroplast regions enabled us to infer more precise phylogenetic hypotheses for the Lamiales. Relationships among the nine first-branching families in the Lamiales tree are now resolved with very strong support. Subsequent to Plocospermataceae, a clade consisting of Carlemanniaceae plus Oleaceae branches, followed by Tetrachondraceae and a newly inferred clade composed of Gesneriaceae plus Calceolariaceae, which is also supported by morphological characters. Plantaginaceae (incl. Gratioleae) and Scrophulariaceae are well separated in the backbone grade; Lamiaceae and Verbenaceae appear in distant clades, while the recently described Linderniaceae are confirmed to be monophyletic and in an isolated position. Conclusions: Confidence about deep nodes of the Lamiales tree is an important step towards understanding the evolutionary diversification of a major clade of flowering plants. The degree of resolution obtained here now provides a first opportunity to discuss the evolution of morphological and biochemical traits in Lamiales. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Durham E-Theses
Durham E-Theses Ecological Changes in the British Flora WALKER, KEVIN,JOHN How to cite: WALKER, KEVIN,JOHN (2009) Ecological Changes in the British Flora, Durham theses, Durham University. Available at Durham E-Theses Online: http://etheses.dur.ac.uk/121/ Use policy The full-text may be used and/or reproduced, and given to third parties in any format or medium, without prior permission or charge, for personal research or study, educational, or not-for-prot purposes provided that: • a full bibliographic reference is made to the original source • a link is made to the metadata record in Durham E-Theses • the full-text is not changed in any way The full-text must not be sold in any format or medium without the formal permission of the copyright holders. Please consult the full Durham E-Theses policy for further details. Academic Support Oce, Durham University, University Oce, Old Elvet, Durham DH1 3HP e-mail: [email protected] Tel: +44 0191 334 6107 http://etheses.dur.ac.uk Ecological Changes in the British Flora Kevin John Walker B.Sc., M.Sc. School of Biological and Biomedical Sciences University of Durham 2009 This thesis is submitted in candidature for the degree of Doctor of Philosophy Dedicated to Terry C. E. Wells (1935-2008) With thanks for the help and encouragement so generously given over the last ten years Plate 1 Pulsatilla vulgaris , Barnack Hills and Holes, Northamptonshire Photo: K.J. Walker Contents ii Contents List of tables vi List of figures viii List of plates x Declaration xi Abstract xii 1. -
In Vitro Regeneration and Transformation of Blackstonia Perfoliata
BIOLOGIA PLANTARUM 48 (3): 333-338, 2004 In vitro regeneration and transformation of Blackstonia perfoliata A. BIJELOVIĆ*1, N. ROSIĆ**, J. MILJUŠ-DJUKIĆ***, S. NINKOVIĆ** and D. GRUBIŠIĆ** Institute of Botany, Faculty of Biology, Takovska 43, 11000 Belgrade, Serbia and Montenegro* Institute for Biological Research “Siniša Stanković”, 29. Novembra 142, 11060 Belgrade, Serbia and Montenegro** Institute for Molecular Genetics and Genetic Engineering, Vojvode Stepe 444a, 11000 Belgrade, Serbia and Montenegro*** Abstract In vitro root culture of yellow wort (Blackstonia perfoliata (L.) Huds.) was initiated on Murashige and Skoog (MS) medium. In the presence of benzylaminopurine (BAP) numerous adventitious buds formed, which developed into shoots. Presence of indole-3-butyric acid (IBA) in media significantly decreased number of buds, but increased development of lateral roots. On hormone-free medium shoots successfully rooted and developed flowers and viable seeds that formed another generation. Shoot cultures of B. perfoliata inoculated with suspension of Agrobacterium rhizogenes strain A4M70GUS developed hairy roots at 3 weeks and they were cultured on hormone-free MS medium. Spontaneous shoot regeneration occurred in 3 clones. Additional key words: Agrobacterium rhizogenes, hairy roots, regeneration, root culture. Introduction Blackstonia perfoliata (yellow wort) (L.) Huds. (Chlora 1997a, Menković et al. 1998, Vintehalter and Vinterhalter perfoliata L., Gentiana perfoliata L., Seguiera perfoliata 1998, Mikula and Rybczynski 2001). O. Kuntze), Gentianaceae, is an annual plant, 10 - 60 cm Since B. perfoliata could be used in medicine instead high, with long internodes, triangular leaves, sometimes of Radix Gentianae, this plant can be produced in great narrowing towards the base (Jovanović-Dunjić 1973). It biomass in culture in vitro. -
Updated Angiosperm Family Tree for Analyzing Phylogenetic Diversity and Community Structure
Acta Botanica Brasilica - 31(2): 191-198. April-June 2017. doi: 10.1590/0102-33062016abb0306 Updated angiosperm family tree for analyzing phylogenetic diversity and community structure Markus Gastauer1,2* and João Augusto Alves Meira-Neto2 Received: August 19, 2016 Accepted: March 3, 2017 . ABSTRACT Th e computation of phylogenetic diversity and phylogenetic community structure demands an accurately calibrated, high-resolution phylogeny, which refl ects current knowledge regarding diversifi cation within the group of interest. Herein we present the angiosperm phylogeny R20160415.new, which is based on the topology proposed by the Angiosperm Phylogeny Group IV, a recently released compilation of angiosperm diversifi cation. R20160415.new is calibratable by diff erent sets of recently published estimates of mean node ages. Its application for the computation of phylogenetic diversity and/or phylogenetic community structure is straightforward and ensures the inclusion of up-to-date information in user specifi c applications, as long as users are familiar with the pitfalls of such hand- made supertrees. Keywords: angiosperm diversifi cation, APG IV, community tree calibration, megatrees, phylogenetic topology phylogeny comprising the entire taxonomic group under Introduction study (Gastauer & Meira-Neto 2013). Th e constant increase in knowledge about the phylogenetic The phylogenetic structure of a biological community relationships among taxa (e.g., Cox et al. 2014) requires regular determines whether species that coexist within a given revision of applied phylogenies in order to incorporate novel data community are more closely related than expected by chance, and is essential information for investigating and avoid out-dated information in analyses of phylogenetic community assembly rules (Kembel & Hubbell 2006; diversity and community structure. -
Palinotaxonomía De Scrophulariaceae Sensu Lato
Bol. Soc. Argent. Bot. 51 (2) 2016 M. M. Sosa y C. R. Salgado - Palinotaxonomía de ScrophulariaceaeISSN sensu 0373-580 lato X Bol. Soc. Argent. Bot. 51 (2): 299-321. 2016 VALOR TAXONÓMICO DEL POLEN EN SCROPHULARIACEAE SENSU LATO MARÍA DE LAS MERCEDES SOSA1,3 y CRISTINA R. SALGADO2,3 Resumen: Este trabajo es el resultado del estudio palinomorfológico de 32 especies pertenecientes a 19 géneros de Scrophulariaceae sensu lato. Además se realizó un registro exhaustivo de la información bibliográfica existente sobre la morfología polínica con el objetivo de analizar las relaciones entre las variables palinológicas y la clasificación sistemática actual. Los granos de polen analizados son: mónades, radiosimétricos e isopolares, de tamaño variable desde pequeños (11 µm) hasta medianos (51 µm), predominantemente esferoidales (P/E= 1), a veces suboblatos (P/E= 0,76), oblato-esferoidales (P/E= 0,95), prolatos (P/E=1,63) y perprolatos (P/E= 2,63). Inaperturados, 3-(4-5) colpados, 3-(4-5) colporados, espiraperturados, 2-8 sincolpados, 3-diploporados y pantoporados. La exina puede ser semitectada (retipilada, reticulada o estriada perforada) y tectada (psilada, foveolada, perforada, escábrida, rugulada, verrugosa, granulada, estriada o equinulada). Se realizó un análisis estadístico en base a una matriz de datos, compuesta por los caracteres palinológicos de 32 especies estudiadas sumado a la recopilación bibliográfica de 140 géneros y 218 especies pertenecientes a Scrophulariaceae sensu lato. El análisis de agrupamiento (UPGMA), confirmó que las diferencias palinomorfológicas apoyan la clasificación sistemática actual. Palabras clave: Morfología del polen, sistemática, euripolínico, Scrophulariaceae. Summary: Taxonomic value of pollen in Scrophulariaceae sensu lato. This paper is result of a study of pollen morphology of 32 species belonging to 19 genera of Scrophulariaceae sensu lato. -
A New Formal Classification of Gesneriaceae Is Proposed
Selbyana 31(2): 68–94. 2013. ANEW FORMAL CLASSIFICATION OF GESNERIACEAE ANTON WEBER* Department of Structural and Functional Botany, Faculty of Biodiversity, University of Vienna, A-1030 Vienna, Austria. Email: [email protected] JOHN L. CLARK Department of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA. MICHAEL MO¨ LLER Royal Botanic Garden Edinburgh, Edinburgh EH3 5LR, Scotland, U.K. ABSTRACT. A new formal classification of Gesneriaceae is proposed. It is the first detailed and overall classification of the family that is essentially based on molecular phylogenetic studies. Three subfamilies are recognized: Sanangoideae (monospecific with Sanango racemosum), Gesnerioideae and Didymocarpoideae. As to recent molecular data, Sanango/Sanangoideae (New World) is sister to Gesnerioideae + Didymocarpoideae. Its inclusion in the Gesneriaceae amends the traditional concept of the family and makes the family distinctly older. Subfam. Gesnerioideae (New World, if not stated otherwise with the tribes) is subdivided into five tribes: Titanotricheae (monospecific, East Asia), Napeantheae (monogeneric), Beslerieae (with two subtribes: Besleriinae and Anetanthinae), Coronanthereae (with three subtribes: Coronantherinae, Mitrariinae and Negriinae; southern hemisphere), and Gesnerieae [with five subtribes: Gesneriinae, Gloxiniinae, Columneinae (5the traditional Episcieae), Sphaerorrhizinae (5the traditional Sphaerorhizeae, monogeneric), and Ligeriinae (5the traditional Sinningieae)]. In the Didymocarpoideae (almost exclusively -
Lamiales – Synoptical Classification Vers
Lamiales – Synoptical classification vers. 2.6.2 (in prog.) Updated: 12 April, 2016 A Synoptical Classification of the Lamiales Version 2.6.2 (This is a working document) Compiled by Richard Olmstead With the help of: D. Albach, P. Beardsley, D. Bedigian, B. Bremer, P. Cantino, J. Chau, J. L. Clark, B. Drew, P. Garnock- Jones, S. Grose (Heydler), R. Harley, H.-D. Ihlenfeldt, B. Li, L. Lohmann, S. Mathews, L. McDade, K. Müller, E. Norman, N. O’Leary, B. Oxelman, J. Reveal, R. Scotland, J. Smith, D. Tank, E. Tripp, S. Wagstaff, E. Wallander, A. Weber, A. Wolfe, A. Wortley, N. Young, M. Zjhra, and many others [estimated 25 families, 1041 genera, and ca. 21,878 species in Lamiales] The goal of this project is to produce a working infraordinal classification of the Lamiales to genus with information on distribution and species richness. All recognized taxa will be clades; adherence to Linnaean ranks is optional. Synonymy is very incomplete (comprehensive synonymy is not a goal of the project, but could be incorporated). Although I anticipate producing a publishable version of this classification at a future date, my near- term goal is to produce a web-accessible version, which will be available to the public and which will be updated regularly through input from systematists familiar with taxa within the Lamiales. For further information on the project and to provide information for future versions, please contact R. Olmstead via email at [email protected], or by regular mail at: Department of Biology, Box 355325, University of Washington, Seattle WA 98195, USA.