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Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
A New Species of Iravadia Ss (Mollusca, Gastropoda, Iravadiidae)
A new species of Iravadia s.s. (Mollusca, Gastropoda, Iravadiidae) from the late Oligocene of the Aquitaine Basin (southern France). The earliest record of brackish-water Iravadiidae? Pierre LOZOUET Muséum national d’Histoire naturelle, Département Systématique et Évolution, 55 rue Buffon, F-75231 Paris cedex 05 (France) [email protected] Lozouet P. 2003. — A new species of Iravadia s.s. (Mollusca, Gastropoda, Iravadiidae) from the late Oligocene of the Aquitaine Basin (southern France). The earliest record of brackish- water Iravadiidae? Geodiversitas 25 (2) : 237-242. KEY WORDS ABSTRACT Mollusca, Gastropoda, A new species of the Indo-West Pacific gastropod Iravadia s.s. is described Rissooidea, from the late Oligocene (Chattian) of southwestern France, the earliest record Iravadia s.s., Oligocene, of the genus. Iravadia dolini n. sp. is close to the recent species I. angulata Cenozoic, (Laseron, 1956) but has a shorter spire and smaller ovate aperture not angled. brackish-water, This discovery suggests that the adaptation of Iravadia Blanford, 1867 to mangrove, southern France, brackish waters (mangroves subenvironment?) probably occurred earlier than new species. previously suspected. RÉSUMÉ Une nouvelle espèce d’ Iravadia s.s. (Mollusca, Gastropoda, Iravadiidae) de l’Oligocène supérieur du bassin d’Aquitaine (Sud de la France). La première MOTS CLÉS occurrence d’Iravadiidae d’eaux saumâtres ? Mollusca, Gastropoda, Une nouvelle espèce du genre Indo-Ouest Pacique Iravadia s.s., la plus Rissooidea, ancienne occurrence du genre, est décrite de l’Oligocène supérieur (Chattien) Iravadia s.s., Oligocène, du Sud-Ouest de France. Iravadia dolini n. sp. est proche de l’espèce actuelle Cénozoïque, I. angulata (Laseron, 1956) mais s’en distingue par une spire plus courte et eaux saumâtres, une ouverture ovale, plus petite et non anguleuse. -
Laboratory Reference Module Summary Report LR22
Laboratory Reference Module Summary Report Benthic Invertebrate Component - 2017/18 LR22 26 March 2018 Author: Tim Worsfold Reviewer: David Hall, NMBAQCS Project Manager Approved by: Myles O'Reilly, Contract Manager, SEPA Contact: [email protected] MODULE / EXERCISE DETAILS Module: Laboratory Reference (LR) Exercises: LR22 Data/Sample Request Circulated: 10th July 2017 Sample Submission Deadline: 31st August 2017 Number of Subscribing Laboratories: 7 Number of LR Received: 4 Contents Table 1. Summary of mis-identified taxa in the Laboratory Reference module (LR22) (erroneous identifications in brackets). Table 2. Summary of identification policy differences in the Laboratory Reference Module (LR22) (original identifications in brackets). Appendix. LR22 individual summary reports for participating laboratories. Table 1. Summary of mis-identified taxa in the Laboratory Reference Module (LR22) (erroneous identifications in brackets). Taxonomic Major Taxonomic Group LabCode Edits Polychaeta Oligochaeta Crustacea Mollusca Other Spio symphyta (Spio filicornis ) - Leucothoe procera (Leucothoe ?richardii ) - - Scolelepis bonnieri (Scolelepis squamata ) - - - - BI_2402 5 Laonice (Laonice sarsi ) - - - - Dipolydora (Dipolydora flava ) - - - - Goniada emerita (Goniadella bobrezkii ) - Nebalia reboredae (Nebalia bipes ) - - Polydora sp. A (Polydora cornuta ) - Diastylis rathkei (Diastylis cornuta ) - - BI_2403 7 Syllides? (Anoplosyllis edentula ) - Abludomelita obtusata (Tryphosa nana ) - in mixture - - Spirorbinae (Ditrupa arietina ) - - - - -
Tampa Bay Benthic Monitoring Program: Status of Middle Tampa Bay: 1993-1998
Tampa Bay Benthic Monitoring Program: Status of Middle Tampa Bay: 1993-1998 Stephen A. Grabe Environmental Supervisor David J. Karlen Environmental Scientist II Christina M. Holden Environmental Scientist I Barbara Goetting Environmental Specialist I Thomas Dix Environmental Scientist II MARCH 2003 1 Environmental Protection Commission of Hillsborough County Richard Garrity, Ph.D. Executive Director Gerold Morrison, Ph.D. Director, Environmental Resources Management Division 2 INTRODUCTION The Environmental Protection Commission of Hillsborough County (EPCHC) has been collecting samples in Middle Tampa Bay 1993 as part of the bay-wide benthic monitoring program developed to (Tampa Bay National Estuary Program 1996). The original objectives of this program were to discern the ―health‖—or ―status‖-- of the bay’s sediments by developing a Benthic Index for Tampa Bay as well as evaluating sediment quality by means of Sediment Quality Assessment Guidelines (SQAGs). The Tampa Bay Estuary Program provided partial support for this monitoring. This report summarizes data collected during 1993-1998 from the Middle Tampa Bay segment of Tampa Bay. 3 METHODS Field Collection and Laboratory Procedures: A total of 127 stations (20 to 24 per year) were sampled during late summer/early fall ―Index Period‖ 1993-1998 (Appendix A). Sample locations were randomly selected from computer- generated coordinates. Benthic samples were collected using a Young grab sampler following the field protocols outlined in Courtney et al. (1993). Laboratory procedures followed the protocols set forth in Courtney et al. (1995). Data Analysis: Species richness, Shannon-Wiener diversity, and Evenness were calculated using PISCES Conservation Ltd.’s (2001) ―Species Diversity and Richness II‖ software. -
Species Fact Sheet with Juga Hemphilli Hemphilli
SPECIES FACT SHEET Scientific Name: Juga hemphilli hemphilli (Henderson 1935) Common Name: barren juga Phylum: Mollusca Class: Gastropoda Order: Neotaenioglossa Family: Semisulcospiridae Taxonomic Note: Past genetic analysis by Lee et al. (2006) based on incorrectly identified museum voucher specimens suggested reassignment of the related subspecies Juga hemphilli dallesensis (and therefore the Juga hemphilli conspecifics, including Juga hemphilli hemphilli) to the genus Elimia. However, Foighil et al. (2009) conducted an additional analysis and determined that Juga hemphilli is indeed most closely related to other western Juga and should not be reassigned to the genus Elimia. Turgeon et al. (1998) do not recognize any subspecies of Juga hemphilli. Conservation Status: Global Status: G2T1 (May 2009) National Status: United States (N1) (June 2000) State Statuses: Oregon (S1), Wahington (S1) (NatureServe 2015) IUCN Red List: NE – Not evaluated Technical Description: This subspecies was originally described as Goniobasis hemphilli hemphilli (Henderson 1935). Burch (1982; 1989) revised this subspecies to the genus Juga to reflect the distribution of taxa west of the Continental Divide. Adult: Juga is a genus of medium-sized, aquatic, gilled snails traditionally treated as part of the subfamily Semisulcospirinae within the Pleuroceridae family, although the Semisulcospirinae subfamily was recently elevated to family level based on morphological and molecular evidence (Strong and Köhler 2009). The Pleuroceridae and Semisulcospiridae families both differ from the Hydrobiidae family in that the males lack a verge (male copulatory organ). The genus Juga is distinct from related pleurocerid snails based on reproductive anatomy and egg mass characters (Taylor 1966), as well as features of the ovipositor pore, radula, midgut, kidney, and pallial gonoduct (Strong and Frest 2007). -
Constraints on the Timescale of Animal Evolutionary History
Palaeontologia Electronica palaeo-electronica.org Constraints on the timescale of animal evolutionary history Michael J. Benton, Philip C.J. Donoghue, Robert J. Asher, Matt Friedman, Thomas J. Near, and Jakob Vinther ABSTRACT Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are fundamental to nearly every evolutionary model and process. Rates need dates. There is much debate on the most appropriate and reasonable ways in which to date the tree of life, and recent work has highlighted some confusions and complexities that can be avoided. Whether phylogenetic trees are dated after they have been estab- lished, or as part of the process of tree finding, practitioners need to know which cali- brations to use. We emphasize the importance of identifying crown (not stem) fossils, levels of confidence in their attribution to the crown, current chronostratigraphic preci- sion, the primacy of the host geological formation and asymmetric confidence intervals. Here we present calibrations for 88 key nodes across the phylogeny of animals, rang- ing from the root of Metazoa to the last common ancestor of Homo sapiens. Close attention to detail is constantly required: for example, the classic bird-mammal date (base of crown Amniota) has often been given as 310-315 Ma; the 2014 international time scale indicates a minimum age of 318 Ma. Michael J. Benton. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Philip C.J. Donoghue. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Robert J. -
MOLLUSCA Nudibranchs, Pteropods, Gastropods, Bivalves, Chitons, Octopus
UNDERWATER FIELD GUIDE TO ROSS ISLAND & MCMURDO SOUND, ANTARCTICA: MOLLUSCA nudibranchs, pteropods, gastropods, bivalves, chitons, octopus Peter Brueggeman Photographs: Steve Alexander, Rod Budd/Antarctica New Zealand, Peter Brueggeman, Kirsten Carlson/National Science Foundation, Canadian Museum of Nature (Kathleen Conlan), Shawn Harper, Luke Hunt, Henry Kaiser, Mike Lucibella/National Science Foundation, Adam G Marsh, Jim Mastro, Bruce A Miller, Eva Philipp, Rob Robbins, Steve Rupp/National Science Foundation, Dirk Schories, M Dale Stokes, and Norbert Wu The National Science Foundation's Office of Polar Programs sponsored Norbert Wu on an Artist's and Writer's Grant project, in which Peter Brueggeman participated. One outcome from Wu's endeavor is this Field Guide, which builds upon principal photography by Norbert Wu, with photos from other photographers, who are credited on their photographs and above. This Field Guide is intended to facilitate underwater/topside field identification from visual characters. Organisms were identified from photographs with no specimen collection, and there can be some uncertainty in identifications solely from photographs. © 1998+; text © Peter Brueggeman; photographs © Steve Alexander, Rod Budd/Antarctica New Zealand Pictorial Collection 159687 & 159713, 2001-2002, Peter Brueggeman, Kirsten Carlson/National Science Foundation, Canadian Museum of Nature (Kathleen Conlan), Shawn Harper, Luke Hunt, Henry Kaiser, Mike Lucibella/National Science Foundation, Adam G Marsh, Jim Mastro, Bruce A Miller, Eva -
Gastropoda: Vetigastropoda: Scissurellidae)
Zootaxa 4759 (4): 593–596 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Correspondence ZOOTAXA Copyright © 2020 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4759.4.11 http://zoobank.org/urn:lsid:zoobank.org:pub:8D3B9B4C-5EA7-4746-9987-CBE75B771D0E Scissurella nesbittae, new species, from the Gries Ranch Formation, Lewis County, Washington State (Gastropoda: Vetigastropoda: Scissurellidae) DANIEL L. GEIGER1 & JAMES L. GOEDERT2 1Santa Barbara Museum of Natural History, 2559 Puesta del Sol, Santa Barbara, CA 93105, USA. E-mail: [email protected] 2Burke Museum of Natural History and Culture, University of Washington, Seattle, WA 98195, USA. E-mail: jamesgoedert@outlook. com Recent and fossil global scissurellids were monographed by Geiger (2012) and additional species were recently described from Brazil (Pimenta & Geiger 2015). Here, we describe an additional fossil species from shallow water strata of the late Eocene Gries Ranch Formation in Lewis County, Washington State, USA. Marine molluscan fossils were first described from exposures of the Gries Ranch Formation along the Cowlitz River more than 100 years ago (Dickerson 1917; Van Winkle 1918) and monographed 80 years ago by Effinger (1938). Since then, many studies have included molluscan taxa from the Gries Ranch fauna (e.g., Dell’Angelo et al. 2011; Goedert & Raines 2016, and references therein). Deposition of the Gries Ranch Formation likely occurred under subtropical condi- tions (Dickerson 1917; Van Winkle 1918) at depths of less than 100 m according to Effinger (1938), although Hickman (1984) has suggested that the Gries Ranch fauna may have been transported into deep water. -
Njumbruch 001-004
NJUMBRUCH 139-341 14.12.2015 16:05 Uhr Seite 211 Jh. Ges. Naturkde. Württemberg 157. Jahrgang Stuttgart, 15. Dezember 2001 Neunachweise von Prosobranchia und Heterostropha (Mollusca, Gastropoda) in der Deutschen Bucht New records of prosobranch and heterostroph gastropods (Mollusca, Gastropoda) in the German Bight Von KLAUS-JÜRGEN GÖTTING, Giessen Mit 31 Abbildungen Summary On the basis of marine molluscan material in the Staatliches Museum für Natur- kunde Stuttgart (collection RENTNER), and long-term personal observation in the sou- thern part of the North Sea 31 species of prosobranchs and heterostrophs could be listed, whose occurrence in the German Bight was previously unknown or debated. Zusammenfassung Anhand von Material mariner Mollusken im Staatlichen Museum für Naturkun- de Stuttgart (Sammlung RENTNER) und ergänzt durch langjährige eigene Beobach- tungen werden 31 Arten von Prosobranchia und Heterostropha aufgeführt, die für die Deutsche Bucht neu sind oder deren Vorkommen in diesem Gebiet bisher um- stritten war. Eine Bestandsaufnahme der Arten in einem bestimmten Gebiet sollte in regelmäßigen Zeitabständen wiederholt werden, um Ausdehnungen und Einschränkungen von Verbreitungsgebieten festzustellen, die möglicherwei- se Rückschlüsse auf klimatische Veränderungen zulassen, und um neue Ein- sichten zur Ökologie sowie zur Position und Nomenklatur wiederzugeben, die den gegenwärtigen Stand systematischer Erkenntnisse widerspiegeln. Damit kann ein Beitrag zur aktuellen Diversitätsforschung geleistet und ei- ne Basis für weitere Untersuchungen geschaffen werden. Für die Bestimmung mitteleuropäischer mariner Gastropoda gibt es eine umfangreiche Literatur. Hier seien erwähnt: ANKEL (1936), FECHTER u. FALKNER (1990), GLÖER u. MEIER-BROOK (1998), KILIAS in STRESEMANN (1992), KUCKUCK (1974), LINDNER (1999), NORDSIECK (1982), POPPE U. GO- TO (1991), WILLMANN (1989) und ZIEGELMEIER (1966). -
Portadas 20 (1)
© Sociedad Española de Malacología Iberus, 20 (1): 95-98, 2002 A new species of the genus Circulus (Gastropoda, Adeorbidae) from West Africa Una nueva especie del género Circulus (Gastropoda, Adeorbidae) de África occidental Emilio ROLÁN* and Peter RYALL** Recibido el 15-II-2002. Aceptado el 5-III-2002 ABSTRACT A new species of the genus Circulus Jeffreys, 1865, Circulus stephani spec. nov., is descri- bed collected from material of sediment obtained in dredgings from Ghana. The new spe- cies is compared with other of the genus from European and West Africa. RESUMEN Se describe una nueva especie del género Circulus Jeffreys, 1865, Circulus stephani spec. nov., obtenida de sedimentos dragados en Ghana. La nueva especie se compara con otras pertenecientes al mismo género de Europa y África. KEY WORDS: Circulus, Adeorbidae, West Africa, new species. PALABRAS CLAVE: Circulus, Adeorbidae, África occidental, nueva especie. INTRODUCTION In recent years there have been a subs- PONDER (1988) and PONDER AND tantial number of works on the small WARÉN (1988) placed the genus Circulus molluscan fauna of West Africa but up to close to Tornidae Sacco (1896). the middle of the last century practically The authors have collected numerous nothing was known about these species. sediment samples from the area which One of the earliest and most important have yielded several species of the genus worksonsuchsmallspecieshasbeenADAM Circulus Jeffreys, 1865 appeared. One of AND KNUDSEN (1956),whichamongothers, these is evidently a new species which is has made reference to the genus Circulus now described in this work. Jeffreys, 1865. Thereafter there have been fourreferencestothisgenusinWestAfrica Abbreviations whichare:Circuluscf.striatus(Philipii,1836) recorded in BERNARD (1984), Circulus sp. -
A New Species of Setia H. Adams Et A. Adams,1852 (Proso - Branchia Caenogastropoda Rissoidae) from the Mediter- Ranean Sea
Biodiversity Journal , 2015, 6 (4): 843–850 A new species of Setia H. Adams et A. Adams,1852 (Proso - branchia Caenogastropoda Rissoidae) from the Mediter- ranean Sea Luigi Romani 1 & Danilo Scuderi 2* 1Via delle ville 79, 55013 Lammari, Lucca, Italy; e-mail: [email protected] 2Via Mauro de Mauro 15b, 95032 Belpasso, Catania, Italy; e-mail: [email protected] *Corresponding author ABSTRACT A new species of Setia H. Adams et A. Adams, 1852 (Prosobranchia Caenogastropoda Rissoidae) is here described as new for science. Specimens were found in samples collected in two localities of the Ionic Sea. Here the description and figures of the new species follow, which is compared to the most similar congeners and to species of different genera, which share the cylindrical shape, smooth shell and rounded top-whorl. Biological notes of the environment where the new species was found are added to complete its profile. KEY WORDS Setia homerica ; Rissoidae; new species; Recent; Mediterranean Sea. Received 18.11.2015; accepted 11.12.2015; printed 30.12.2015 INTRODUCTION vania Gofas, 2007; Gofasia Bouchet et Warén, 1993; Rissoa Desmarest, 1814; Pusillina Monterosato, The family Rissoidae Gray, 1847 is a hyperdi - 1884) to cancellate ( Alvania Risso, 1826). verse group of gastropods with a worldwide distri - The species of Setia are characterized by minute bution, living from the infralittoral to the bathyal shells, smooth teleoconch, where only faint growth region (Ponder, 1985; Criscione & Ponder, 2013 lines can be detected. Shells are generally colour - and herein). In the Mediterranean Sea and along the less with dark strips and/or spots; aperture almost Atlantic coasts of Europe Rissoidae are extraordin- rounded with simple peristome; the protoconch arily represented (Ávila et al., 2012). -
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group THE MARINE BIODIVERSITY AND FISHERIES CATCHES OF THE PITCAIRN ISLAND GROUP M.L.D. Palomares, D. Chaitanya, S. Harper, D. Zeller and D. Pauly A report prepared for the Global Ocean Legacy project of the Pew Environment Group by the Sea Around Us Project Fisheries Centre The University of British Columbia 2202 Main Mall Vancouver, BC, Canada, V6T 1Z4 TABLE OF CONTENTS FOREWORD ................................................................................................................................................. 2 Daniel Pauly RECONSTRUCTION OF TOTAL MARINE FISHERIES CATCHES FOR THE PITCAIRN ISLANDS (1950-2009) ...................................................................................... 3 Devraj Chaitanya, Sarah Harper and Dirk Zeller DOCUMENTING THE MARINE BIODIVERSITY OF THE PITCAIRN ISLANDS THROUGH FISHBASE AND SEALIFEBASE ..................................................................................... 10 Maria Lourdes D. Palomares, Patricia M. Sorongon, Marianne Pan, Jennifer C. Espedido, Lealde U. Pacres, Arlene Chon and Ace Amarga APPENDICES ............................................................................................................................................... 23 APPENDIX 1: FAO AND RECONSTRUCTED CATCH DATA ......................................................................................... 23 APPENDIX 2: TOTAL RECONSTRUCTED CATCH BY MAJOR TAXA ............................................................................