<I>Seimatosporium</I>, and Introduction Of
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Taxaarea Relationship and Neutral Dynamics Influence the Diversity Of
bs_bs_banner Environmental Microbiology (2012) 14(6), 1488–1499 doi:10.1111/j.1462-2920.2012.02737.x Taxa–area relationship and neutral dynamics influence the diversity of fungal communities on senesced tree leavesemi_2737 1488..1499 Larry M. Feinstein* and Christopher B. Blackwood to environmental changes may be enhanced with Department of Biological Sciences, Kent State increased understanding of the processes that regulate University, Kent, Ohio, USA fungal distributions. Variation in composition of ecological communities is commonly divided into two components: alpha diversity (number and evenness of taxa within a Summary sampling unit) and beta diversity (taxa turnover among This study utilized individual senesced sugar maple areas) (Gaston and Blackburn, 2000). and beech leaves as natural sampling units within For macroorganisms, it has been frequently observed which to quantify saprotrophic fungal diversity. Quan- that there is a correlation between the size of habitat tifying communities in individual leaves allowed us to patches or survey areas and the most fundamental determine if fungi display a classic taxa–area relation- measure of alpha diversity, number of taxa detected ship (species richness increasing with area). We (Rosenzweig, 1995; Connor and McCoy, 2001; Lomolino, found a significant taxa–area relationship for sugar 2001; Drakare et al., 2006). The ‘taxa–area relationship’ maple leaves, but not beech leaves, consistent with (TAR) refers to the shape of the increase in number of Wright’s species-energy theory. This suggests that taxa with increasing area, and has been most often mod- energy availability as affected plant biochemistry is a elled as a power law (S = cAz) where S is number of key factor regulating the scaling relationships of species, A is area, c is the intercept in log-log space, and fungal diversity. -
The Genera Excluded from the Amphisphaeriaceae, Cainiaceae and Clypeosphaeriaceae
Fungal Diversity 2 (March 1999) Studies on Amphisphaeriales: The genera excluded from the Amphisphaeriaceae, Cainiaceae and Clypeosphaeriaceae Ji-Chuan Kangl, Kevin D. Hydel• and Richard Y.c. Kontf I Fungal Diversity Research Project, Department of Ecology and Biodiversity, The University of Hong Kong, Pokfulam Road, Hong Kong; * email: [email protected] 2 Department of Biology and Chemistry, City University of Hong Kong, Tat Chee A venue, Kowloon, Hong Kong Kang, J.C., Hyde, K.D. and Kong, R.Y.C. (1999). Studies on Amphisphaeriales: The genera excluded from the Amphisphaeriaceae, Cainiaceae and Clypeosphaeriaceae. Fungal Diversity 2: 135-151. The Amphisphaeriaceae and the Cainiaceae have been narrowly defined, while the Clypeosphaeriaceae was broadly defined and considered a relatively large assemblage of ascomycetes whose affinities are uncertain. In this paper, the remaining genera previously included in the Amphisphaeriaceae (sensu lato) are dealt with. Fasciatispora having unicellular brown ascospores, and Seynesia and Collodiscula having brown ascospores and an Acanthodochium anamorph are similar to xylariaceous taxa and therefore considered best placed in the Xylariaceae. Muelleromyces has a parasitic habit on leaves, clypeate ascomata and asci with a J- apical ring and resembles Phyllachora, and is placed in the Phyllachoraceae. Melomastia is redescribed and illustrated and placed in the Pleurotremataceae. Chitonospora, Dyrithium and lodosphaeria are redescribed and illustrated, while Amphisphaerella, Ascotaiwania, Flagellosphaeria, Lindquistomyces, Manokwaria, Mukhakesa, Neohypodiscus, Urosporellopsis and Xylochora are discussed. These genera are placed in Ascomycetes incertae sedis as the available morphological data are inadequate to confidently conclude their taxonomic positions. Key words: Ascomycetes incertae sedis, Phyllachoraceae, Pleurotremataceae, taxonomy, Xylariaceae. Introduction The broadly defined Amphisphaeriaceae G. -
Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
(US) 38E.85. a 38E SEE", A
USOO957398OB2 (12) United States Patent (10) Patent No.: US 9,573,980 B2 Thompson et al. (45) Date of Patent: Feb. 21, 2017 (54) FUSION PROTEINS AND METHODS FOR 7.919,678 B2 4/2011 Mironov STIMULATING PLANT GROWTH, 88: R: g: Ei. al. 1 PROTECTING PLANTS FROM PATHOGENS, 3:42: ... g3 is et al. A61K 39.00 AND MMOBILIZING BACILLUS SPORES 2003/0228679 A1 12.2003 Smith et al." ON PLANT ROOTS 2004/OO77090 A1 4/2004 Short 2010/0205690 A1 8/2010 Blä sing et al. (71) Applicant: Spogen Biotech Inc., Columbia, MO 2010/0233.124 Al 9, 2010 Stewart et al. (US) 38E.85. A 38E SEE",teWart et aal. (72) Inventors: Brian Thompson, Columbia, MO (US); 5,3542011/0321197 AllA. '55.12/2011 SE",Schön et al.i. Katie Thompson, Columbia, MO (US) 2012fO259101 A1 10, 2012 Tan et al. 2012fO266327 A1 10, 2012 Sanz Molinero et al. (73) Assignee: Spogen Biotech Inc., Columbia, MO 2014/0259225 A1 9, 2014 Frank et al. US (US) FOREIGN PATENT DOCUMENTS (*) Notice: Subject to any disclaimer, the term of this CA 2146822 A1 10, 1995 patent is extended or adjusted under 35 EP O 792 363 B1 12/2003 U.S.C. 154(b) by 0 days. EP 1590466 B1 9, 2010 EP 2069504 B1 6, 2015 (21) Appl. No.: 14/213,525 WO O2/OO232 A2 1/2002 WO O306684.6 A1 8, 2003 1-1. WO 2005/028654 A1 3/2005 (22) Filed: Mar. 14, 2014 WO 2006/O12366 A2 2/2006 O O WO 2007/078127 A1 7/2007 (65) Prior Publication Data WO 2007/086898 A2 8, 2007 WO 2009037329 A2 3, 2009 US 2014/0274707 A1 Sep. -
Forestry Department Food and Agriculture Organization of the United Nations
Forestry Department Food and Agriculture Organization of the United Nations Forest Health & Biosecurity Working Papers OVERVIEW OF FOREST PESTS KENYA January 2007 Forest Resources Development Service Working Paper FBS/20E Forest Management Division FAO, Rome, Italy Forestry Department DISCLAIMER The aim of this document is to give an overview of the forest pest1 situation in Kenya. It is not intended to be a comprehensive review. The designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. © FAO 2007 1 Pest: Any species, strain or biotype of plant, animal or pathogenic agent injurious to plants or plant products (FAO, 2004). Overview of forest pests - Kenya TABLE OF CONTENTS Introduction..................................................................................................................... 1 Forest pests...................................................................................................................... 1 Naturally regenerating forests..................................................................................... 1 Insects ..................................................................................................................... 1 Diseases.................................................................................................................. -
Color Plates
Color Plates Plate 1 (a) Lethal Yellowing on Coconut Palm caused by a Phytoplasma Pathogen. (b, c) Tulip Break on Tulip caused by Lily Latent Mosaic Virus. (d, e) Ringspot on Vanda Orchid caused by Vanda Ringspot Virus R.K. Horst, Westcott’s Plant Disease Handbook, DOI 10.1007/978-94-007-2141-8, 701 # Springer Science+Business Media Dordrecht 2013 702 Color Plates Plate 2 (a, b) Rust on Rose caused by Phragmidium mucronatum.(c) Cedar-Apple Rust on Apple caused by Gymnosporangium juniperi-virginianae Color Plates 703 Plate 3 (a) Cedar-Apple Rust on Cedar caused by Gymnosporangium juniperi.(b) Stunt on Chrysanthemum caused by Chrysanthemum Stunt Viroid. Var. Dark Pink Orchid Queen 704 Color Plates Plate 4 (a) Green Flowers on Chrysanthemum caused by Aster Yellows Phytoplasma. (b) Phyllody on Hydrangea caused by a Phytoplasma Pathogen Color Plates 705 Plate 5 (a, b) Mosaic on Rose caused by Prunus Necrotic Ringspot Virus. (c) Foliar Symptoms on Chrysanthemum (Variety Bonnie Jean) caused by (clockwise from upper left) Chrysanthemum Chlorotic Mottle Viroid, Healthy Leaf, Potato Spindle Tuber Viroid, Chrysanthemum Stunt Viroid, and Potato Spindle Tuber Viroid (Mild Strain) 706 Color Plates Plate 6 (a) Bacterial Leaf Rot on Dieffenbachia caused by Erwinia chrysanthemi.(b) Bacterial Leaf Rot on Philodendron caused by Erwinia chrysanthemi Color Plates 707 Plate 7 (a) Common Leafspot on Boston Ivy caused by Guignardia bidwellii.(b) Crown Gall on Chrysanthemum caused by Agrobacterium tumefaciens 708 Color Plates Plate 8 (a) Ringspot on Tomato Fruit caused by Cucumber Mosaic Virus. (b, c) Powdery Mildew on Rose caused by Podosphaera pannosa Color Plates 709 Plate 9 (a) Late Blight on Potato caused by Phytophthora infestans.(b) Powdery Mildew on Begonia caused by Erysiphe cichoracearum.(c) Mosaic on Squash caused by Cucumber Mosaic Virus 710 Color Plates Plate 10 (a) Dollar Spot on Turf caused by Sclerotinia homeocarpa.(b) Copper Injury on Rose caused by sprays containing Copper. -
Phylogenetic Analysis of the Synnema-Producing Genus Synnemapestaloides
Journal of Fungi Article Phylogenetic Analysis of the Synnema-Producing Genus Synnemapestaloides Kyoko Watanabe 1,2,3,*, Mao Sekiguchi 2, Toyozo Sato 4, Tom Hsiang 5, Shigeru Kaneko 4, Kazuaki Tanaka 6, Masaru Kanda 7, Naoko Fujita 8 and Shunsuke Nozawa 2 1 Faculty of Agriculture, Tamagawa University, 6-1-1 Tamagawa-gakuen, Machida, Tokyo 194-8610, Japan 2 Graduate School of Agriculture, Tamagawa University, 6-1-1 Tamagawa-gakuen, Machida, Tokyo 194-8610, Japan; [email protected] (M.S.); [email protected] (S.N.) 3 Mycology & Metabolic Diversity Research Center, Tamagawa University, 6-1-1 Tamagawa-gakuen, Machida, Tokyo 194-8610, Japan 4 Genetic Resources Center, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan; [email protected] (T.S.); [email protected] (S.K.) 5 Environmental Sciences, University of Guelph, Guelph, ON N1G 2W1, Canada; [email protected] 6 Faculty of Agriculture and Life Sciences, Hirosaki University, 3 Bunkyo-cho, Hirosaki, Aomori 036-8561, Japan; [email protected] 7 Green Doctors, 1-10-13-201 Sagamihara, Chuoku, Sagamihara, Kanagawa 252-0231, Japan; [email protected] 8 Laboratory of Plant Pathology, Graduate School of Agriculture, Tokyo University of Agriculture and Technology, 3-5-8 Saiwaicho, Fuchu, Tokyo 183-8509, Japan; [email protected] * Correspondence: [email protected]; Tel.: +81-42-739-8247 Academic Editor: David S. Perlin Received: 1 September 2016; Accepted: 1 November 2016; Published: 7 November 2016 Abstract: Synnemapestaloides rhododendri, the type species of the genus Synnemapestaloides, is a pathogen of Rhododendron brachycarpum. -
(Sporocadaceae): an Important Genus of Plant Pathogenic Fungi
Persoonia 40, 2018: 96–118 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2018.40.04 Seiridium (Sporocadaceae): an important genus of plant pathogenic fungi G. Bonthond1, M. Sandoval-Denis1,2, J.Z. Groenewald1, P.W. Crous1,3,4 Key words Abstract The genus Seiridium includes multiple plant pathogenic fungi well-known as causal organisms of cankers on Cupressaceae. Taxonomically, the status of several species has been a topic of debate, as the phylogeny of the appendage-bearing conidia genus remains unresolved and authentic ex-type cultures are mostly absent. In the present study, a large collec- canker pathogen tion of Seiridium cultures and specimens from the CBS and IMI collections was investigated morphologically and Cupressus phylogenetically to resolve the taxonomy of the genus. These investigations included the type material of the most pestalotioid fungi important Cupressaceae pathogens, Seiridium cardinale, S. cupressi and S. unicorne. We constructed a phylogeny systematics of Seiridium based on four loci, namely the ITS rDNA region, and partial translation elongation factor 1-alpha (TEF), β-tubulin (TUB) and RNA polymerase II core subunit (RPB2). Based on these results we were able to confirm that S. unicorne and S. cupressi represent different species. In addition, five new Seiridium species were described, S. cupressi was lectotypified and epitypes were selected for S. cupressi and S. eucalypti. Article info Received: 24 August 2017; Accepted: 2 November 2017; Published: 9 January 2018. INTRODUCTION cardinale is the most aggressive and was first identified in California, from where the disease has since spread to other The genus Seiridium (Sordariomycetes, Xylariales, Sporoca continents. -
Pestalotioid Fungi from Restionaceae in the Cape Floral Kingdom
STUDIES IN MYCOLOGY 55: 175–187. 2006. Pestalotioid fungi from Restionaceae in the Cape Floral Kingdom Seonju Lee1*, Pedro W. Crous2 and Michael J. Wingfield1 1Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Lunnon Road, Hillcrest, Pretoria 0002, South Africa; 2Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands *Correspondence: Seonju Lee, [email protected] Abstract: Eight pestalotioid fungi were isolated from the Restionaceae growing in the Cape Floral Kingdom of South Africa. Sarcostroma restionis, Truncatella megaspora, T. restionacearum and T. spadicea are newly described. New records include Pestalotiopsis matildae, Sarcostroma lomatiae, Truncatella betulae and T. hartigii. To resolve generic affiliations, phylogenetic analyses were performed on ITS (ITS1, 5.8S, ITS2) and part of 28S rDNA. DNA data support the original generic concept of Truncatella, which encompasses Pestalotiopsis species having 3-septate conidia. The genus Sarcostroma is retained as separate from Seimatosporium. Taxonomic novelties: Pestalotiopsis matildae (Richatt) S. Lee & Crous comb. nov., Truncatella betulae (Morochk.) S. Lee & Crous comb. nov., Sarcostroma restionis S. Lee & Crous sp. nov., Truncatella megaspora S. Lee & Crous sp. nov., Truncatella restionacearum S. Lee & Crous sp. nov., Truncatella spadicea S. Lee & Crous sp. nov. Key words: Fungi imperfecti, fynbos, microfungi, South Africa, systematics. INTRODUCTION MATERIALS AND METHODS The Restionaceae (restios) is a monocotyledonous Isolates family distributed in the Southern Hemisphere, which Field collections were made in Western Cape Province includes more than 30 genera and about 400 species nature reserves and in undisturbed areas of the fynbos (Figs 1–6). In Africa approximately 330 species are during 2000–2002. -
<I>Acrocordiella</I>
Persoonia 37, 2016: 82–105 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X690475 Resolution of morphology-based taxonomic delusions: Acrocordiella, Basiseptospora, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Requienella, Seiridium and Strickeria W.M. Jaklitsch1,2, A. Gardiennet3, H. Voglmayr2 Key words Abstract Fresh material, type studies and molecular phylogeny were used to clarify phylogenetic relationships of the nine genera Acrocordiella, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Ascomycota Requienella, Seiridium and Strickeria. At first sight, some of these genera do not seem to have much in com- Dothideomycetes mon, but all were found to belong to the Xylariales, based on their generic types. Thus, the most peculiar finding new genus is the phylogenetic affinity of the genera Acrocordiella, Requienella and Strickeria, which had been classified in phylogenetic analysis the Dothideomycetes or Eurotiomycetes, to the Xylariales. Acrocordiella and Requienella are closely related but pyrenomycetes distinct genera of the Requienellaceae. Although their ascospores are similar to those of Lepteutypa, phylogenetic Pyrenulales analyses do not reveal a particularly close relationship. The generic type of Lepteutypa, L. fuckelii, belongs to the Sordariomycetes Amphisphaeriaceae. Lepteutypa sambuci is newly described. Hymenopleella is recognised as phylogenetically Xylariales distinct from Lepteutypa, and Hymenopleella hippophaëicola is proposed as new name for its generic type, Spha eria (= Lepteutypa) hippophaës. Clypeosphaeria uniseptata is combined in Lepteutypa. No asexual morphs have been detected in species of Lepteutypa. Pseudomassaria fallax, unrelated to the generic type, P. chondrospora, is transferred to the new genus Basiseptospora, the genus Pseudapiospora is revived for P. corni, and Pseudomas saria carolinensis is combined in Beltraniella (Beltraniaceae). -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
What If Esca Disease of Grapevine Were Not a Fungal Disease?
Fungal Diversity (2012) 54:51–67 DOI 10.1007/s13225-012-0171-z What if esca disease of grapevine were not a fungal disease? Valérie Hofstetter & Bart Buyck & Daniel Croll & Olivier Viret & Arnaud Couloux & Katia Gindro Received: 20 March 2012 /Accepted: 1 April 2012 /Published online: 24 April 2012 # The Author(s) 2012. This article is published with open access at Springerlink.com Abstract Esca disease, which attacks the wood of grape- healthy and diseased adult plants and presumed esca patho- vine, has become increasingly devastating during the past gens were widespread and occurred in similar frequencies in three decades and represents today a major concern in all both plant types. Pioneer esca-associated fungi are not trans- wine-producing countries. This disease is attributed to a mitted from adult to nursery plants through the grafting group of systematically diverse fungi that are considered process. Consequently the presumed esca-associated fungal to be latent pathogens, however, this has not been conclu- pathogens are most likely saprobes decaying already senes- sively established. This study presents the first in-depth cent or dead wood resulting from intensive pruning, frost or comparison between the mycota of healthy and diseased other mecanical injuries as grafting. The cause of esca plants taken from the same vineyard to determine which disease therefore remains elusive and requires well execu- fungi become invasive when foliar symptoms of esca ap- tive scientific study. These results question the assumed pear. An unprecedented high fungal diversity, 158 species, pathogenicity of fungi in other diseases of plants or animals is here reported exclusively from grapevine wood in a single where identical mycota are retrieved from both diseased and Swiss vineyard plot.