The Genera Excluded from the Amphisphaeriaceae, Cainiaceae and Clypeosphaeriaceae
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Pestalotioid Fungi from Restionaceae in the Cape Floral Kingdom
STUDIES IN MYCOLOGY 55: 175–187. 2006. Pestalotioid fungi from Restionaceae in the Cape Floral Kingdom Seonju Lee1*, Pedro W. Crous2 and Michael J. Wingfield1 1Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Lunnon Road, Hillcrest, Pretoria 0002, South Africa; 2Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands *Correspondence: Seonju Lee, [email protected] Abstract: Eight pestalotioid fungi were isolated from the Restionaceae growing in the Cape Floral Kingdom of South Africa. Sarcostroma restionis, Truncatella megaspora, T. restionacearum and T. spadicea are newly described. New records include Pestalotiopsis matildae, Sarcostroma lomatiae, Truncatella betulae and T. hartigii. To resolve generic affiliations, phylogenetic analyses were performed on ITS (ITS1, 5.8S, ITS2) and part of 28S rDNA. DNA data support the original generic concept of Truncatella, which encompasses Pestalotiopsis species having 3-septate conidia. The genus Sarcostroma is retained as separate from Seimatosporium. Taxonomic novelties: Pestalotiopsis matildae (Richatt) S. Lee & Crous comb. nov., Truncatella betulae (Morochk.) S. Lee & Crous comb. nov., Sarcostroma restionis S. Lee & Crous sp. nov., Truncatella megaspora S. Lee & Crous sp. nov., Truncatella restionacearum S. Lee & Crous sp. nov., Truncatella spadicea S. Lee & Crous sp. nov. Key words: Fungi imperfecti, fynbos, microfungi, South Africa, systematics. INTRODUCTION MATERIALS AND METHODS The Restionaceae (restios) is a monocotyledonous Isolates family distributed in the Southern Hemisphere, which Field collections were made in Western Cape Province includes more than 30 genera and about 400 species nature reserves and in undisturbed areas of the fynbos (Figs 1–6). In Africa approximately 330 species are during 2000–2002. -
<I>Acrocordiella</I>
Persoonia 37, 2016: 82–105 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X690475 Resolution of morphology-based taxonomic delusions: Acrocordiella, Basiseptospora, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Requienella, Seiridium and Strickeria W.M. Jaklitsch1,2, A. Gardiennet3, H. Voglmayr2 Key words Abstract Fresh material, type studies and molecular phylogeny were used to clarify phylogenetic relationships of the nine genera Acrocordiella, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Ascomycota Requienella, Seiridium and Strickeria. At first sight, some of these genera do not seem to have much in com- Dothideomycetes mon, but all were found to belong to the Xylariales, based on their generic types. Thus, the most peculiar finding new genus is the phylogenetic affinity of the genera Acrocordiella, Requienella and Strickeria, which had been classified in phylogenetic analysis the Dothideomycetes or Eurotiomycetes, to the Xylariales. Acrocordiella and Requienella are closely related but pyrenomycetes distinct genera of the Requienellaceae. Although their ascospores are similar to those of Lepteutypa, phylogenetic Pyrenulales analyses do not reveal a particularly close relationship. The generic type of Lepteutypa, L. fuckelii, belongs to the Sordariomycetes Amphisphaeriaceae. Lepteutypa sambuci is newly described. Hymenopleella is recognised as phylogenetically Xylariales distinct from Lepteutypa, and Hymenopleella hippophaëicola is proposed as new name for its generic type, Spha eria (= Lepteutypa) hippophaës. Clypeosphaeria uniseptata is combined in Lepteutypa. No asexual morphs have been detected in species of Lepteutypa. Pseudomassaria fallax, unrelated to the generic type, P. chondrospora, is transferred to the new genus Basiseptospora, the genus Pseudapiospora is revived for P. corni, and Pseudomas saria carolinensis is combined in Beltraniella (Beltraniaceae). -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Emarcea Castanopsidicola Gen. Et Sp. Nov. from Thailand, a New Xylariaceous Taxon Based on Morphology and DNA Sequences
STUDIES IN MYCOLOGY 50: 253–260. 2004. Emarcea castanopsidicola gen. et sp. nov. from Thailand, a new xylariaceous taxon based on morphology and DNA sequences Lam. M. Duong2,3, Saisamorn Lumyong3, Kevin D. Hyde1,2 and Rajesh Jeewon1* 1Centre for Research in Fungal Diversity, Department of Ecology & Biodiversity, The University of Hong Kong, Pokfulam Road, Hong Kong, SAR China; 2Mushroom Research Centre, 128 Mo3 Ban Phadeng, PaPae, Maetaeng, Chiang Mai 50150, Thailand 3Department of Biology, Chiang Mai University, Chiang Mai, Thailand *Correspondence: Rajesh Jeewon, [email protected] Abstract: We describe a unique ascomycete genus occurring on leaf litter of Castanopsis diversifolia from monsoonal forests of northern Thailand. Emarcea castanopsidicola gen. et sp. nov. is typical of Xylariales as ascomata develop beneath a blackened clypeus, ostioles are papillate and asci are unitunicate with a J+ subapical ring. The ascospores in Emarcea cas- tanopsidicola are, however, 1-septate, hyaline and long fusiform, which distinguishes it from other genera in the Xylariaceae. In order to substantiate these morphological findings, we analysed three sets of sequence data generated from ribosomal DNA gene (18S, 28S and ITS) under different optimality criteria. We analysed this data to provide further information on the phylogeny and taxonomic position of this new taxon. All phylogenies were essentially similar and there is conclusive mo- lecular evidence to support the establishment of Emarcea castanopsidicola within the Xylariales. Results indicate that this taxon bears close phylogenetic affinities to Muscodor (anamorphic Xylariaceae) and Xylaria species and therefore this genus is best accommodated in the Xylariaceae. Taxonomic novelties: Emarcea Duong, R. Jeewon & K.D. -
Some Rare and Interesting Fungal Species of Phylum Ascomycota from Western Ghats of Maharashtra: a Taxonomic Approach
Journal on New Biological Reports ISSN 2319 – 1104 (Online) JNBR 7(3) 120 – 136 (2018) Published by www.researchtrend.net Some rare and interesting fungal species of phylum Ascomycota from Western Ghats of Maharashtra: A taxonomic approach Rashmi Dubey Botanical Survey of India Western Regional Centre, Pune – 411001, India *Corresponding author: [email protected] | Received: 29 June 2018 | Accepted: 07 September 2018 | ABSTRACT Two recent and important developments have greatly influenced and caused significant changes in the traditional concepts of systematics. These are the phylogenetic approaches and incorporation of molecular biological techniques, particularly the analysis of DNA nucleotide sequences, into modern systematics. This new concept has been found particularly appropriate for fungal groups in which no sexual reproduction has been observed (deuteromycetes). Taking this view during last five years surveys were conducted to explore the Ascomatal fungal diversity in natural forests of Western Ghats of Maharashtra. In the present study, various areas were visited in different forest ecosystems of Western Ghats and collected the live, dried, senescing and moribund leaves, logs, stems etc. This multipronged effort resulted in the collection of more than 1000 samples with identification of more than 300 species of fungi belonging to Phylum Ascomycota. The fungal genera and species were classified in accordance to Dictionary of fungi (10th edition) and Index fungorum (http://www.indexfungorum.org). Studies conducted revealed that fungal taxa belonging to phylum Ascomycota (316 species, 04 varieties in 177 genera) ruled the fungal communities and were represented by sub phylum Pezizomycotina (316 species and 04 varieties belonging to 177 genera) which were further classified into two categories: (1). -
Pacific Northwest Fungi
North American Fungi Volume 8, Number 10, Pages 1-13 Published June 19, 2013 Vialaea insculpta revisited R.A. Shoemaker, S. Hambleton, M. Liu Biodiversity (Mycology and Botany) / Biodiversité (Mycologie et Botanique) Agriculture and Agri-Food Canada / Agriculture et Agroalimentaire Canada 960 Carling Avenue / 960, avenue Carling, Ottawa, Ontario K1A 0C6 Canada Shoemaker, R.A., S. Hambleton, and M. Liu. 2013. Vialaea insculpta revisited. North American Fungi 8(10): 1-13. doi: http://dx.doi: 10.2509/naf2013.008.010 Corresponding author: R.A. Shoemaker: [email protected]. Accepted for publication May 23, 2013 http://pnwfungi.org Copyright © Her Majesty the Queen in Right of Canada, as represented by the Minister of Agriculture and Agri-Food Canada Abstract: Vialaea insculpta, occurring on Ilex aquifolium, is illustrated and redescribed from nature and pure culture to assess morphological features used in its classification and to report new molecular studies of the Vialaeaceae and its ordinal disposition. Tests of the germination of the distinctive ascospores in water containing parts of Ilex flowers after seven days resulted in the production of appressoria without mycelium. Phylogenetic analyses based on a fragment of ribosomal RNA gene small subunit suggest that the taxon belongs in Xylariales. Key words: Valsaceae and Vialaeaceae, (Diaporthales), Diatrypaceae (Diatrypales), Amphisphaeriaceae and Hyphonectriaceae (Xylariales), Ilex, endophyte. 2 Shoemaker et al. Vialaea inscupta. North American Fungi 8(10): 1-13 Introduction: Vialaea insculpta (Fr.) Sacc. is on oatmeal agar at 20°C exposed to daylight. a distinctive species occurring on branches of Isolation attempts from several other collections Ilex aquifolium L. Oudemans (1871, tab. -
Xylariales, Ascomycota), Designation of an Epitype for the Type Species of Iodosphaeria, I
VOLUME 8 DECEMBER 2021 Fungal Systematics and Evolution PAGES 49–64 doi.org/10.3114/fuse.2021.08.05 Phylogenetic placement of Iodosphaeriaceae (Xylariales, Ascomycota), designation of an epitype for the type species of Iodosphaeria, I. phyllophila, and description of I. foliicola sp. nov. A.N. Miller1*, M. Réblová2 1Illinois Natural History Survey, University of Illinois Urbana-Champaign, Champaign, IL, USA 2Czech Academy of Sciences, Institute of Botany, 252 43 Průhonice, Czech Republic *Corresponding author: [email protected] Key words: Abstract: The Iodosphaeriaceae is represented by the single genus, Iodosphaeria, which is composed of nine species with 1 new taxon superficial, black, globose ascomata covered with long, flexuous, brown hairs projecting from the ascomata in a stellate epitypification fashion, unitunicate asci with an amyloid apical ring or ring lacking and ellipsoidal, ellipsoidal-fusiform or allantoid, hyaline, phylogeny aseptate ascospores. Members of Iodosphaeria are infrequently found worldwide as saprobes on various hosts and a wide systematics range of substrates. Only three species have been sequenced and included in phylogenetic analyses, but the type species, taxonomy I. phyllophila, lacks sequence data. In order to stabilize the placement of the genus and family, an epitype for the type species was designated after obtaining ITS sequence data and conducting maximum likelihood and Bayesian phylogenetic analyses. Iodosphaeria foliicola occurring on overwintered Alnus sp. leaves is described as new. Five species in the genus form a well-supported monophyletic group, sister to thePseudosporidesmiaceae in the Xylariales. Selenosporella-like and/or ceratosporium-like synasexual morphs were experimentally verified or found associated with ascomata of seven of the nine accepted species in the genus. -
A New Order of Aquatic and Terrestrial Fungi for Achroceratosphaeria and Pisorisporium Gen
Persoonia 34, 2015: 40–49 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158515X685544 Pisorisporiales, a new order of aquatic and terrestrial fungi for Achroceratosphaeria and Pisorisporium gen. nov. in the Sordariomycetes M. Réblová1, J. Fournier 2, V. Štěpánek3 Key words Abstract Four morphologically similar specimens of an unidentified perithecial ascomycete were collected on decaying wood submerged in fresh water. Phylogenetic analysis of DNA sequences from protein-coding and Achroceratosphaeria ribosomal nuclear loci supports the placement of the unidentified fungus together with Achroceratosphaeria in a freshwater strongly supported monophyletic clade. The four collections are described as two new species of the new genus Hypocreomycetidae Pisorisporium characterised by non-stromatic, black, immersed to superficial perithecial ascomata, persistent para- Koralionastetales physes, unitunicate, persistent asci with an amyloid apical annulus and hyaline, fusiform, cymbiform to cylindrical, Lulworthiales transversely multiseptate ascospores with conspicuous guttules. The asexual morph is unknown and no conidia multigene analysis were formed in vitro or on the natural substratum. The clade containing Achroceratosphaeria and Pisorisporium is systematics introduced as the new order Pisorisporiales, family Pisorisporiaceae in the class Sordariomycetes. It represents a new lineage of aquatic fungi. A sister relationship for Pisorisporiales with the Lulworthiales and Koralionastetales is weakly supported -
<I>Seimatosporium</I>, and Introduction Of
Persoonia 26, 2011: 85–98 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE doi:10.3767/003158511X576666 Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova K. Tanaka1, M. Endo1, K. Hirayama1, I. Okane2, T. Hosoya3, T. Sato4 Key words Abstract Discosia (teleomorph unknown) and Seimatosporium (teleomorph Discostroma) are saprobic or plant pathogenic, coelomycetous genera of so-called ‘pestalotioid fungi’ within the Amphisphaeriaceae (Xylariales). Amphisphaeriaceae They share several morphological features and their generic circumscriptions appear unclear. We investigated the anamorph phylogenies of both genera on the basis of SSU, LSU and ITS nrDNA and -tubulin gene sequences. Discosia was coelomycetes β not monophyletic and was separated into two distinct lineages. Discosia eucalypti deviated from Discosia clade and Discostroma was transferred to a new genus, Immersidiscosia, characterised by deeply immersed, pycnidioid conidiomata that pestalotioid fungi are intraepidermal to subepidermal in origin, with a conidiomatal beak having periphyses. Subdividing Discosia into Xylariales ‘sections’ was not considered phylogenetically significant at least for the three sections investigated (sect. Discosia, Laurina, and Strobilina). We recognised Seimatosporium s.l. as a monophyletic genus. An undescribed species belonging to Discosia with its associated teleomorph was collected on living leaves of Symplocos prunifolia from Yakushima Island, Japan. We have therefore established a new teleomorphic genus, Adisciso, for this new spe- cies, A. yakushimense. Discostroma tricellulare (anamorph: Seimatosporium azaleae), previously described from Rhododendron species, was transferred to Adisciso based on morphological and phylogenetic grounds. Adisciso is characterised by relatively small-sized ascomata without stromatic tissue, obclavate to broadly cylindrical asci with biseriate ascospores that have 2 transverse septa, and its Discosia anamorph. -
MICROBIAL FUNCTIONAL ACTIVITY and DIVERSITY PATTERNS at MULTIPLE SPATIAL SCALES a Dissertation Submitted to Kent State Universit
MICROBIAL FUNCTIONAL ACTIVITY AND DIVERSITY PATTERNS AT MULTIPLE SPATIAL SCALES A Dissertation submitted to Kent State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy by Larry M. Feinstein August, 2012 Dissertation written by Larry M. Feinstein B.S., Wright State University, 1999 Ph.D., Kent State University, 2012 Approved by , Chair, Doctoral Dissertation Committee Christopher B. Blackwood , Members, Doctoral Dissertation Committee Laura G. Leff Mark W. Kershner Gwenn L. Volkert Accepted by , Chair, Department of Biological Sciences James L. Blank , Dean, College of Arts and Science John R. D. Stalvey ii TABLE OF CONTENTS LIST OF FIGURES……………………………………………...............……………….iv LIST OF TABLES...............................................................................................................x ACKNOWLEDGMENTS................................................................................................xiii 5 CHAPTER 1. Introduction……………….........……………………………………...……..…....1 References..................................................................................................11 2. Assessment of Bias Associated with Incomplete Extraction of Microbial DNA from Soil.........................................................................………………..……….18 10 Abstract.......…….………………………………………………..….…...18 Introduction............…………………………………..……………..……19 Methods......……………………………………………………….…...…21 Results...............................................................................................….....27 -
The 100 Years of the Fungus Collection Mucl 1894-1994
THE 100 YEARS OF THE FUNGUS COLLECTION MUCL 1894-1994 Fungal Taxonomy and Tropical Mycology: Quo vadis ? Taxonomy and Nomenclature of the Fungi Grégoire L. Hennebert Catholic University of Louvain, Belgium Notice of the editor This document is now published as an archive It is available on www.Mycotaxon.com It is also produced on CD and in few paperback copies G. L. Hennebert ed. Published by Mycotaxon, Ltd. Ithaca, New York, USA December 2010 ISBN 978-0-930845-18-6 (www pdf version) ISBN 978-0-930845-17-9 (paperback version) DOI 10.5248/2010MUCL.pdf 1894-1994 MUCL Centenary CONTENTS Lists of participants 8 Forword John Webser 13 PLENARY SESSION The 100 Year Fungus Culture Collection MUCL, June 29th, 1994 G.L. Hennebert, UCL Mycothèque de l'Université Catholique de Louvain (MUCL) 17 D. Hawksworth, IMI, U.K. Fungal genetic resource collections and biodiversity. 27 D. van der Mei, CBS, MINE, Netherlands The fungus culture collections in Europe. 34 J. De Brabandere, BCCM, Belgium The Belgian Coordinated Collections of Microorganisms. 40 Fungal Taxonomy and tropical Mycology G.L. Hennebert, UCL Introduction. Fungal taxonomy and tropical mycology: Quo vadis ? 41 C.P. Kurtzman, NRRL, USA Molecular taxonomy in the yeast fungi: present and future. 42 M. Blackwell, Louisiana State University, USA Phylogeny of filamentous fungi deduced from analysis of molecular characters: present and future. 52 J. Rammeloo, National Botanical Garden, Belgium Importance of morphological and anatomical characters in fungal taxonomy. 57 M.F. Roquebert, Natural History Museum, France Possible progress of modern morphological analysis in fungal taxonomy. 63 A.J. -
Logs and Chips of Eighteen Eucalypt Species from Australia
United States Department of Agriculture Pest Risk Assessment Forest Service of the Importation Into Forest Products Laboratory the United States of General Technical Report Unprocessed Logs and FPL−GTR−137 Chips of Eighteen Eucalypt Species From Australia P. (=Tryphocaria) solida, P. tricuspis; Scolecobrotus westwoodi; Abstract Tessaromma undatum; Zygocera canosa], ghost moths and carpen- The unmitigated pest risk potential for the importation of unproc- terworms [Abantiades latipennis; Aenetus eximius, A. ligniveren, essed logs and chips of 18 species of eucalypts (Eucalyptus amyg- A. paradiseus; Zelotypia stacyi; Endoxyla cinereus (=Xyleutes dalina, E. cloeziana, E. delegatensis, E. diversicolor, E. dunnii, boisduvali), Endoxyla spp. (=Xyleutes spp.)], true powderpost E. globulus, E. grandis, E. nitens, E. obliqua, E. ovata, E. pilularis, beetles (Lyctus brunneus, L. costatus, L. discedens, L. parallelocol- E. regnans, E. saligna, E. sieberi, E. viminalis, Corymbia calo- lis; Minthea rugicollis), false powderpost or auger beetles (Bo- phylla, C. citriodora, and C. maculata) from Australia into the strychopsis jesuita; Mesoxylion collaris; Sinoxylon anale; Xylion United States was assessed by estimating the likelihood and conse- cylindricus; Xylobosca bispinosa; Xylodeleis obsipa, Xylopsocus quences of introduction of representative insects and pathogens of gibbicollis; Xylothrips religiosus; Xylotillus lindi), dampwood concern. Twenty-two individual pest risk assessments were pre- termite (Porotermes adamsoni), giant termite (Mastotermes dar- pared, fifteen dealing with insects and seven with pathogens. The winiensis), drywood termites (Neotermes insularis; Kalotermes selected organisms were representative examples of insects and rufinotum, K. banksiae; Ceratokalotermes spoliator; Glyptotermes pathogens found on foliage, on the bark, in the bark, and in the tuberculatus; Bifiditermes condonensis; Cryptotermes primus, wood of eucalypts. C.