Perciformes, Apogonidae) from the Red Sea
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Pacific Plate Biogeography, with Special Reference to Shorefishes
Pacific Plate Biogeography, with Special Reference to Shorefishes VICTOR G. SPRINGER m SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 367 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoo/ogy Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world cf science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
"Red Sea and Western Indian Ocean Biogeography"
A review of contemporary patterns of endemism for shallow water reef fauna in the Red Sea Item Type Article Authors DiBattista, Joseph; Roberts, May B.; Bouwmeester, Jessica; Bowen, Brian W.; Coker, Darren James; Lozano-Cortés, Diego; Howard Choat, J.; Gaither, Michelle R.; Hobbs, Jean-Paul A.; Khalil, Maha T.; Kochzius, Marc; Myers, Robert F.; Paulay, Gustav; Robitzch Sierra, Vanessa S. N.; Saenz Agudelo, Pablo; Salas, Eva; Sinclair-Taylor, Tane; Toonen, Robert J.; Westneat, Mark W.; Williams, Suzanne T.; Berumen, Michael L. Citation A review of contemporary patterns of endemism for shallow water reef fauna in the Red Sea 2015:n/a Journal of Biogeography Eprint version Post-print DOI 10.1111/jbi.12649 Publisher Wiley Journal Journal of Biogeography Rights This is the peer reviewed version of the following article: DiBattista, J. D., Roberts, M. B., Bouwmeester, J., Bowen, B. W., Coker, D. J., Lozano-Cortés, D. F., Howard Choat, J., Gaither, M. R., Hobbs, J.-P. A., Khalil, M. T., Kochzius, M., Myers, R. F., Paulay, G., Robitzch, V. S. N., Saenz-Agudelo, P., Salas, E., Sinclair-Taylor, T. H., Toonen, R. J., Westneat, M. W., Williams, S. T. and Berumen, M. L. (2015), A review of contemporary patterns of endemism for shallow water reef fauna in the Red Sea. Journal of Biogeography., which has been published in final form at http:// doi.wiley.com/10.1111/jbi.12649. This article may be used for non-commercial purposes in accordance With Wiley Terms and Conditions for self-archiving. Download date 23/09/2021 15:38:13 Link to Item http://hdl.handle.net/10754/583300 1 Special Paper 2 For the virtual issue, "Red Sea and Western Indian Ocean Biogeography" 3 LRH: J. -
Reef Fishes of the Bird's Head Peninsula, West Papua, Indonesia
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
APOGONIDAE Cardinalfishes by G.R
click for previous page 2602 Bony Fishes APOGONIDAE Cardinalfishes by G.R. Allen iagnostic characters: Small (to 20 cm, usually under 12 cm) percoid fishes; body ovate to elongate, Dmoderately compressed. Eyes large, their diameter exceeding snout length. Rear margin of cheek (preopercle) with characteristic double edge, which is variously serrated or smooth. Mouth large, lower jaw often protruding. Jaws with bands of small villiform teeth; teeth present on vomer, but palatine teeth may be absent; enlarged canines on premaxillae, dentaries, or vomer in some species. Two separate dorsal fins, the first consisting of VI to VIII rigid spines, the second with I rigid spine and 8 to 14 soft rays. Anal fin with II rigid spines and 8 to 18 soft rays. Caudal fin rounded to forked, frequently emarginate or truncate. Pelvic fins with I spine and 5 soft rays. Pectoral fins with 10 to 20 rays. Branchiostegal rays 7. Scales relatively large in marine species, except absent in Gymnapogon;scales usually ctenoid, but cycloid in a few species, about 9 to 37 lateral-line scales in most marine species, but absent in at least 1 species of Siphamia. Colour: highly variable, frequently shades of black, brown, red, or yellow; many species exhibit a pattern of dark bars or stripes on a lighter ground colour. 2 dorsal fins Apogon double-edged preopercle II anal-fin Pterapogon spines Rhabdamia Habitat, biology, and fisheries: Inhabit coral and rocky reefs and adjacent habitats including sand-rubble patches and seagrass beds; several species frequently shelter among the spines of sea urchins (usually Diadema) or Crown-of-thorns starfish (Acanthaster). -
Fishes Collected During the 2017 Marinegeo Assessment of Kāne
Journal of the Marine Fishes collected during the 2017 MarineGEO Biological Association of the ā ‘ ‘ ‘ United Kingdom assessment of K ne ohe Bay, O ahu, Hawai i 1 1 1,2 cambridge.org/mbi Lynne R. Parenti , Diane E. Pitassy , Zeehan Jaafar , Kirill Vinnikov3,4,5 , Niamh E. Redmond6 and Kathleen S. Cole1,3 1Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, PO Box 37012, MRC 159, Washington, DC 20013-7012, USA; 2Department of Biological Sciences, National University of Singapore, Original Article Singapore 117543, 14 Science Drive 4, Singapore; 3School of Life Sciences, University of Hawai‘iatMānoa, 2538 McCarthy Mall, Edmondson Hall 216, Honolulu, HI 96822, USA; 4Laboratory of Ecology and Evolutionary Biology of Cite this article: Parenti LR, Pitassy DE, Jaafar Aquatic Organisms, Far Eastern Federal University, 8 Sukhanova St., Vladivostok 690091, Russia; 5Laboratory of Z, Vinnikov K, Redmond NE, Cole KS (2020). 6 Fishes collected during the 2017 MarineGEO Genetics, National Scientific Center of Marine Biology, Vladivostok 690041, Russia and National Museum of assessment of Kāne‘ohe Bay, O‘ahu, Hawai‘i. Natural History, Smithsonian Institution DNA Barcode Network, Smithsonian Institution, PO Box 37012, MRC 183, Journal of the Marine Biological Association of Washington, DC 20013-7012, USA the United Kingdom 100,607–637. https:// doi.org/10.1017/S0025315420000417 Abstract Received: 6 January 2020 We report the results of a survey of the fishes of Kāne‘ohe Bay, O‘ahu, conducted in 2017 as Revised: 23 March 2020 part of the Smithsonian Institution MarineGEO Hawaii bioassessment. We recorded 109 spe- Accepted: 30 April 2020 cies in 43 families. -
Describing Species
DESCRIBING SPECIES Practical Taxonomic Procedure for Biologists Judith E. Winston COLUMBIA UNIVERSITY PRESS NEW YORK Columbia University Press Publishers Since 1893 New York Chichester, West Sussex Copyright © 1999 Columbia University Press All rights reserved Library of Congress Cataloging-in-Publication Data © Winston, Judith E. Describing species : practical taxonomic procedure for biologists / Judith E. Winston, p. cm. Includes bibliographical references and index. ISBN 0-231-06824-7 (alk. paper)—0-231-06825-5 (pbk.: alk. paper) 1. Biology—Classification. 2. Species. I. Title. QH83.W57 1999 570'.1'2—dc21 99-14019 Casebound editions of Columbia University Press books are printed on permanent and durable acid-free paper. Printed in the United States of America c 10 98765432 p 10 98765432 The Far Side by Gary Larson "I'm one of those species they describe as 'awkward on land." Gary Larson cartoon celebrates species description, an important and still unfinished aspect of taxonomy. THE FAR SIDE © 1988 FARWORKS, INC. Used by permission. All rights reserved. Universal Press Syndicate DESCRIBING SPECIES For my daughter, Eliza, who has grown up (andput up) with this book Contents List of Illustrations xiii List of Tables xvii Preface xix Part One: Introduction 1 CHAPTER 1. INTRODUCTION 3 Describing the Living World 3 Why Is Species Description Necessary? 4 How New Species Are Described 8 Scope and Organization of This Book 12 The Pleasures of Systematics 14 Sources CHAPTER 2. BIOLOGICAL NOMENCLATURE 19 Humans as Taxonomists 19 Biological Nomenclature 21 Folk Taxonomy 23 Binomial Nomenclature 25 Development of Codes of Nomenclature 26 The Current Codes of Nomenclature 50 Future of the Codes 36 Sources 39 Part Two: Recognizing Species 41 CHAPTER 3. -
Comparative Anatomy of the Caudal Skeleton of Lantern Fishes of The
Revista de Biología Marina y Oceanografía Vol. 51, Nº3: 713-718, diciembre 2016 DOI 10.4067/S0718-19572016000300025 RESEARCH NOTE Comparative anatomy of the caudal skeleton of lantern fishes of the genus Triphoturus Fraser-Brunner, 1949 (Teleostei: Myctophidae) Anatomía comparada del complejo caudal de los peces linterna del género Triphoturus Fraser-Brunner, 1949 (Teleostei: Myctophidae) Uriel Rubio-Rodríguez1, Adrián F. González-Acosta1 and Héctor Villalobos1 1Instituto Politécnico Nacional, Departamento de Pesquerías y Biología Marina, CICIMAR-IPN, Av. Instituto Politécnico Nacional s/n, Col. Playa Palo de Santa Rita, La Paz, BCS, 23096, México. [email protected] Abstract.- The caudal skeleton provides important information for the study of the systematics and ecomorphology of teleostean fish. However, studies based on the analysis of osteological traits are scarce for fishes in the order Myctophiformes. This paper describes the anatomy of the caudal bones of 3 Triphoturus species: T. mexicanus (Gilbert, 1890), T. nigrescens (Brauer, 1904) and T. oculeum (Garman, 1899). A comparative analysis was performed on cleared and stained specimens to identify the differences and similarities of bony elements and the organization of the caudal skeleton among the selected species. Triphoturus mexicanus differs from T. oculeum in the presence of medial neural plates and a foramen in the parhypural, while T. nigrescens differs from their congeners in a higher number of hypurals (2 + 4 = 6) and the separation and number of cartilaginous elements. This osteological description of the caudal region allowed updates to the nomenclature of bony and cartilaginous elements in myctophids. Further, this study allows for the recognition of structural differences between T. -
Introduced Marine Species in Pago Pago Harbor, Fagatele Bay and the National Park Coast, American Samoa
INTRODUCED MARINE SPECIES IN PAGO PAGO HARBOR, FAGATELE BAY AND THE NATIONAL PARK COAST, AMERICAN SAMOA December 2003 COVER Typical views of benthic organisms from sampling areas (clockwise from upper left): Fouling organisms on debris at Pago Pago Harbor Dry Dock; Acropora hyacinthus tables in Fagetele Bay; Porites rus colonies in Fagasa Bay; Mixed branching and tabular Acropora in Vatia Bay INTRODUCED MARINE SPECIES IN PAGO PAGO HARBOR, FAGATELE BAY AND THE NATIONAL PARK COAST, AMERICAN SAMOA Final report prepared for the U.S. Fish and Wildlife Service, Fagetele Bay Marine Sanctuary, National Park of American Samoa and American Samoa Department of Marine and Natural Resources. S. L. Coles P. R. Reath P. A. Skelton V. Bonito R. C. DeFelice L. Basch Bishop Museum Pacific Biological Survey Bishop Museum Technical Report No 26 Honolulu Hawai‘i December 2003 Published by Bishop Museum Press 1525 Bernice Street Honolulu, Hawai‘i Copyright © 2003 Bishop Museum All Rights Reserved Printed in the United States of America ISSN 1085-455X Contribution No. 2003-007 to the Pacific Biological Survey EXECUTIVE SUMMARY The biological communities at ten sites around the Island of Tutuila, American Samoa were surveyed in October 2002 by a team of four investigators. Diving observations and collections of benthic observations using scuba and snorkel were made at six stations in Pago Pago Harbor, two stations in Fagatele Bay, and one station each in Vatia Bay and Fagasa Bay. The purpose of this survey was to determine the full complement of organisms greater than 0.5 mm in size, including benthic algae, macroinvertebrates and fishes, occurring at each site, and to evaluate the presence and potential impact of nonindigenous (introduced) marine species. -
Anatomy and Evolution of the Pectoral Filaments of Threadfins (Polynemidae)
www.nature.com/scientificreports OPEN Anatomy and evolution of the pectoral flaments of threadfns (Polynemidae) Paulo Presti1*, G. David Johnson2 & Aléssio Datovo1 The most remarkable anatomical specialization of threadfns (Percomorphacea: Polynemidae) is the division of their pectoral fn into an upper, unmodifed fn and a lower portion with rays highly modifed into specialized flaments. Such flaments are usually elongate, free from interradial membrane, and move independently from the unmodifed fn to explore the environment. The evolution of the pectoral flaments involved several morphological modifcations herein detailed for the frst time. The posterior articular facet of the coracoid greatly expands anteroventrally during development. Similar expansions occur in pectoral radials 3 and 4, with the former usually acquiring indentations with the surrounding bones and losing association with both rays and flaments. Whereas most percomorphs typically have four or fve muscles serving the pectoral fn, adult polynemids have up to 11 independent divisions in the intrinsic pectoral musculature. The main adductor and abductor muscles masses of the pectoral system are completely divided into two muscle segments, each independently serving the pectoral-fn rays (dorsally) and the pectoral flaments (ventrally). Based on the innervation pattern and the discovery of terminal buds in the external surface of the flaments, we demonstrate for the frst time that the pectoral flaments of threadfns have both tactile and gustatory functions. Polynemids are easily identifable as a natural group based on their external morphology, particularly their dis- tinct pectoral fn divided into a dorsal part, with 12–19 sof rays united by an interradial membrane, and a ventral portion with around 3–16 isolated rays that are usually elongated, forming flaments with tactile functions1,2. -
Atoll Research Bulletin No. 461 Report on Fish
ATOLL RESEARCH BULLETIN NO. 461 REPORT ON FISH COLLECTIONS FROM THE PITCAIRN ISLANDS BY JOHN E. RANDALL ISSUED BY NATIONAL MUSEUM OF NATURAL HISTORY SMITHSONIAN INSTITUTION WASHINGTON, D.C., U.S.A. AUGUST 1999 Figure 1. Oeno Atoll (aerial photograph by Gerald R. Allen, 1969). ADAMSTOWN PITCAIRN ISLAND I3 Fipe2. Map of Pitcairn Island (modified from A Guide to Pitcairn, British South Pacific Office, Suva, 1970). REPORT ON FISH COI INS FROM THE PITCAIRN BY jomE. RAND ALL^ ABSTRACT A total of 348 species of marine fishes are recorded from the four Pitcairn Islands in southeastern Oceania: Pitcairn, Henderson, and the atolls Oeno and Ducie. Nearly all of the species listed are from collections made by the author and associates in 1970-71 and deposited in the Bernice P. Bishop Museum, Honolulu. Thirty-three of these were new species when they were collected but have since been described. Twenty-six species are listed only by genus, 15 of which appear to be undescribed and are under study; the remaining 11 are unidentified. Five species of fishes are presently known only from the Pitcairn Islands: Sargocentron megalops, Hemitaurichthys multispinosus, Ammodytes sp., Enneapterygius ornatus, and Alticus sp. Of the 335 species from the Pitcairn Islands that are shore fishes (the other 13 being regarded as pelagic), 284 are tropical species that are wide-ranging in the central and western Pacific, many of which extend their distribution into the Indian Ocean. Thirty-six of the Pitcairn fishes occur only in the Southern Hemisphere south of latitude 14' S; 21 of these are found only south of 20"s. -
A DNA Barcode Reference Library of the French Polynesian Shore Fishes 4 5 Erwan Delrieu-Trottin1,2,3,4, Jeffrey T
bioRxiv preprint doi: https://doi.org/10.1101/595793; this version posted June 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Data Descriptor 2 3 A DNA barcode reference library of the French Polynesian shore fishes 4 5 Erwan Delrieu-Trottin1,2,3,4, Jeffrey T. Williams5, Diane Pitassy5, Amy Driskell6, Nicolas Hubert1, Jérémie 6 Viviani3,7,8, Thomas H. Cribb9 , Benoit Espiau3,4, René Galzin3,4, Michel Kulbicki10, Thierry Lison de Loma3,4, 7 Christopher Meyer11, Johann Mourier3,4,12, Gérard Mou-Tham10, Valeriano Parravicini3,4, Patrick 8 Plantard3,4, Pierre Sasal3,4, Gilles Siu3,4, Nathalie Tolou3,4, Michel Veuille4,13, Lee Weigt6 & Serge Planes3,4 9 10 1. Institut de Recherche pour le Développement, UMR 226 ISEM (UM2-CNRS-IRD-EPHE), Université de 11 Montpellier, Place Eugène Bataillon, CC 065, F-34095 Montpellier cedex 05, France 12 2. Museum für Naturkunde, Leibniz-Institut für Evolutions-und Biodiversitätsforschung an der Humboldt- 13 Universität zu Berlin, Invalidenstrasse 43, Berlin 10115, Germany 14 3. PSL Research University, EPHE-UPVD-CNRS, USR 3278 CRIOBE, Université de Perpignan, 58 Avenue 15 Paul Alduy, 66860, Perpignan, France. 16 4. Laboratoire d’Excellence «CORAIL», Papetoai, Moorea, French Polynesia , France. 17 5. Division of Fishes, Department of Vertebrate Zoology, National Museum of Natural History, 18 Smithsonian Institution, 4210 Silver Hill Road, Suitland, MD 20746, USA 19 6. Laboratories of Analytical Biology, National Museum of Natural History, Smithsonian Institution, 20 Washington, D.C., 20013, United States of America 21 7. -
Revision of the Systematics of the Cardinalfishes (Percomorpha: Apogonidae) Based on Molecular Analyses and Comparative Reevaluation of Morphological Characters
Zootaxa 3846 (2): 151–203 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3846.2.1 http://zoobank.org/urn:lsid:zoobank.org:pub:3844E8F1-A20C-44B4-9B47-B170F5A7C0C2 Revision of the systematics of the cardinalfishes (Percomorpha: Apogonidae) based on molecular analyses and comparative reevaluation of morphological characters KOHJI MABUCHI1, THOMAS H. FRASER2,3, HAYEUN SONG1, YOICHIRO AZUMA1 & MUTSUMI NISHIDA1,4 1Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8564, Japan. E-mail: [email protected] 2Florida Museum of Natural History, University of Florida, Dickinson Hall, Museum Road, Gainesville, Florida, 32611, United States 3Mote Marine Laboratory, 1600 Ken Thompson Parkway, Sarasota, Florida 34236, United States. E-mail: [email protected] 4University of the Ryukyus, 1 Senbaru, Nishihara-cho, Okinawa 903-0213, Japan Table of contents Abstract . 152 Introduction . 152 Material and methods . 155 Results . 163 Discussion . 171 Family, subfamily and tribal morphological diagnoses, general distribution and remarks . 173 1. FAMILY . 173 Family Apogonidae Günther 1859 . 173 2. SUBFAMILIES . 174 Key to the subfamilies of Apogonidae . 174 Amioidinae new subfamily Fraser & Mabuchi . 175 Subfamily Apogoninae Günther 1859 . 175 Paxtoninae new subfamily Fraser & Mabuchi . 176 Subfamily Pseudamiinae Smith 1954 . 177 3. APOGONINAE TRIBES ALL NEW . 178 Tribe Apogonichthyini Snodgrass & Heller 1905 . 178 Tribe Apogonini Günther 1859 . 178 Tribe Archamiini new name Fraser & Mabuchi . 179 Tribe Cheilodipterini Bleeker 1856 . 180 Tribe Glossamiini new name Fraser & Mabuchi . 180 Tribe Gymnapogonini Whitley 1941 . 181 Tribe Lepidamiini new name Fraser & Mabuchi .