On the Physiology of Amoeboid Movement.*
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A Viable Therapy Against Metastatic Breast Cancer
Graduate Theses, Dissertations, and Problem Reports 2017 Dual Targeting of the Mesenchymal and Amoeboid Pathways: A Viable Therapy against Metastatic Breast Cancer Brandon C. Jones Follow this and additional works at: https://researchrepository.wvu.edu/etd Recommended Citation Jones, Brandon C., "Dual Targeting of the Mesenchymal and Amoeboid Pathways: A Viable Therapy against Metastatic Breast Cancer" (2017). Graduate Theses, Dissertations, and Problem Reports. 5905. https://researchrepository.wvu.edu/etd/5905 This Dissertation is protected by copyright and/or related rights. It has been brought to you by the The Research Repository @ WVU with permission from the rights-holder(s). You are free to use this Dissertation in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you must obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Dissertation has been accepted for inclusion in WVU Graduate Theses, Dissertations, and Problem Reports collection by an authorized administrator of The Research Repository @ WVU. For more information, please contact [email protected]. Dual Targeting of the Mesenchymal and Amoeboid Pathways: A Viable Therapy against Metastatic Breast Cancer Brandon C. Jones Dissertation submitted to the School of Medicine at West Virginia University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biochemistry & Molecular Biology Elena Pugacheva, Ph.D., Chair J. Michael Ruppert, M.D., Ph.D. Maxim Sokolov, Ph.D. Michael Schaller, Ph.D. Scott Weed, Ph.D. -
Emergence of Self-Organized Amoeboid Movement in a Multi-Agent Approximation of Physarum Polycephalum
Emergence of Self-Organized Amoeboid Movement in a Multi-Agent Approximation of Physarum polycephalum Jeff Jones and Andrew Adamatzky Centre for Unconventional Computing, University of the West of England, Coldharbour Lane, Bristol BS16 1QY, UK. [email protected] , [email protected] Abstract: The giant single-celled slime mould Physarum polycephalum exhibits complex morphological adaptation and amoeboid movement as it forages for food and may be seen as a minimal example of complex robotic behaviour. Swarm computation has previously been used to explore how spatio- temporal complexity can emerge from, and be distributed within, simple component parts and their interactions. Using a particle based swarm approach we explore the question of how to generate collective amoeboid movement from simple non-oscillatory component parts in a model of P. polycephalum . The model collective behaves as a cohesive and deformable virtual material, approximating the local coupling within the plasmodium matrix. The collective generates de-novo and complex oscillatory patterns from simple local interactions. The origin of this motor behaviour is distributed within the collective rendering is morphologically adaptive, amenable to external influence, and robust to simulated environmental insult. We show how to gain external influence over the collective movement by simulated chemo-attraction (pulling towards nutrient stimuli) and simulated light irradiation hazards ( pushing from stimuli). The amorphous and distributed properties of the collective are demonstrated by cleaving it into two independent entities and fusing two separate entities to form a single device, thus enabling it to traverse narrow, separate or tortuous paths. We conclude by summarising the contribution of the model to swarm based robotics and soft-bodied modular robotics and discuss the future potential of such material approaches to the field. -
Protozoa : Locomotion and Nutrition
Protozoa : locomotion and Nutrition Lecturer : P. V. Deokar Department of Zoology R.K.M.M. Ahmednagar Locomotion in Protozoa • The following points highlight the three main types of locomotion exhibited by protozoans. The types of locomotion are: • 1. Amoeboid Movement • 2. Flagellar Movement • 3. Ciliary Movement. Protozoans: Type of Locomotion # 1. Amoeboid Movement: • movement of the animal is made by the throwing of pseudopodium, called amoeboid movement • In the direction of movement of Amoeba a new pseudopodium is formed and the pseudopodium at the opposite side gradually disappears. • Types of pseudopodia: • According to form, structure and activity four different kinds of pseudopodia are recognised • These are: • (a) Lobopodium • (b) Filopodium • (c) Reticulopodium or Rhizopodium • (d) Axopodium or Actinopodium (a) Lobopodium [Gk. lobes = lobe; podium = foot]: • It is a short, finger or tongue-like projection which is accompanied by a flow of endoplasm and ectoplasm. • The pseudopodium is broad with rounded or blunt tips. • The ectoplasmmic area is distinctly clear, called the hyaline cap. • It is the characteristic of many amoebas such as Amoeba. (b) Filopodium [L.filo = a thread; podium = foot]: • The filopodium is a slender, thread-like or filamentous projection. • It is formed by the ectoplasm alone and without a hyaline cap. • The filaments are narrow and may be branched but do not anastomose, Filopodium is the characteristic in Filosea (e.g., Euglypha ). (c) Reticulopodium or Rhizopodium [L. reticulos = a net, podium = foot]: • Similar in structure to that of filopodium but the branches anastomose. • The numerous branched and anastomosed pseudopodia form a dense network, help primarily in capturing the prey and the secondary function is locomotion. -
On the Physiology of Amoeboid Movement
ON THE PHYSIOLOGY OF AMOEBOID MOVEMENT. IV.—THE ACTION OF MAGNESIUM. BY C. F. A. PANTIN. {The Marine Biological Laboratory, Plymouth?) (Received January 6th, 1926.) CONTENTS 1. Maintenance of the cell-surface . 297 6. The action of Ce'" in the pres- 2. The action of barium . 300 ence of Ca" .... 306 3. The action of cerium . 301 4. Action of Mg" in the presence 7. Discussion 306 of Ca" 302 8. Summary 310 5. Interaction of the ions of sea- 9. References 311 water 303 THE previous paper of this series (Pantin, 1926) described the action of certain ions upon a species of marine amoeba, and especially the relation of calcium to amoeboid movement. The same paper detailed the method of preparing isotonic salt solutions and of determining their effect on amoeboid movement. The essential feature is that the average velocity is taken as a measure of the effect of a solution upon the power of movement, apart from other effects produced upon the cell. Unless otherwise stated, the CH of the solutions was maintained at /H 7.0 to 7.2. 1. Maintenance of the cell-surface. It was shown previously that whereas cytolysis occurred rapidly in pure isotonic NaCl or KCl (at about />H 7), amoebae remained alive for a longer time in isotonic CaCl= and MgClj. Movement was inhibited in these solutions, but reversibly, for, provided immersion had been brief, recovery occurred on return to natural sea-water. In mixtures of two salts, it was found that movement only occurred if Ca were 297 C. F. A. -
Pressure Sensing Through Piezo Channels Controls Whether Cells Migrate with Blebs Or Pseudopods
Pressure sensing through Piezo channels controls whether cells migrate with blebs or pseudopods Nishit Srivastavaa,c,d, David Traynorb,1, Matthieu Pielc,d, Alexandre J. Kablaa, and Robert R. Kayb,2 aDepartment of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom; bLaboratory of Molecular Biology, Medical Research Council, Cambridge CB20QH, United Kingdom; cInstitut Curie, Université Paris Sciences et Lettres, CNRS, UMR 144, 75005 Paris, France; and dInstitut Pierre-Gilles de Gennes, Université Paris Sciences et Lettres, 75005 Paris, France Edited by David A. Weitz, Harvard University, Cambridge, MA, and approved December 24, 2019 (received for review April 4, 2019) Blebs and pseudopods can both power cell migration, with blebs Dictyostelium amoebae move through varied environments often favored in tissues, where cells encounter increased mechan- during their life cycle. As single cells, they hunt bacteria through ical resistance. To investigate how migrating cells detect and the interstices of the soil, and when starved and developing, they respond to mechanical forces, we used a “cell squasher” to apply chemotax to cyclic AMP and move in coordinated groups that uniaxial pressure to Dictyostelium cells chemotaxing under develop into stalked fruiting bodies, with cell sorting playing a soft agarose. As little as 100 Pa causes a rapid (<10 s), sustained key role (33, 34). We found previously that Dictyostelium cells shift to movement with blebs rather than pseudopods. Cells are prefer pseudopods when moving under buffer, but blebs under a flattened under load and lose volume; the actin cytoskeleton is stiff agarose overlay (35). In both cases, the cells move on the reorganized, with myosin II recruited to the cortex, which may same glass substratum, but under agarose they must also break pressurize the cytoplasm for blebbing. -
Mechanics and Control of the Cytoskeleton in Amoeba Proteus
Mechanics and control of the cytoskeleton in Amoeba proteus Micah Dembo Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 ABSTRACT Many models of the cyto- accounts for the kinematics of the Several dynamical factors are crucial skeletal motility of Amoeba proteus can cytoskeleton: the detailed velocity field to the success of the minimal model be formulated in terms of the theory of of the forward flow of the endoplasm, and are likely to be general features of reactive interpenetrating flow (Dembo the contraction of the ectoplasmic cytoskeletal mechanics and control in and Harlow, 1986). We have devised tube, and the inversion of the flow in the amoeboid cells. These are: a constitu- numerical methodology for testing such fountain zone. The model also gives a tive law for the viscosity of the contrac- models against the phenomenon of satisfactory account of measurements tile network that includes an automatic steady axisymmetric fountain flow. The of pressure gradients, measurements process of gelation as the network simplest workable scheme revealed by of heat dissipation, and measurements density gets large; a very vigorous such tests (the minimal model) is the of the output of useful work by amoe- cycle of network polymerization and main preoccupation of this study. All ba. Finally, the model suggests a very depolymerization (in the case of A. parameters of the minimal model are promising (but still hypothetical) con- proteus, the time constant for this reac- determined from available data. Using tinuum formulation of the free boundary tion is z12 s); control of network con- these parameters the model quantita- problem of amoeboid motion. -
The Cell-Motility-Lowering Effects of Microtubule Depolymerization in Amoebae Proteus
The cell-motility-lowering effects of Microtubule depolymerization in Amoebae Proteus Bio219 Home The cell-motility-lowering effects of Microtubule depolymerization in Amoebae Proteus. Robert Borkowski Wheaton College Norton, MA 02766 (860) 539-4969 Posted on 25 November 2003, Revised 9 December 2003 Introduction Materials Results Discussion Bibliography I. Introduction In a phenomenom known as amoeboid movement, certain organisms, and certain cell types, move in a fairly slow manner by extendeding appendages known as pseudopodia (Fukui, 2002). These psuedopodia form primarily from the actions of actin filaments, and mysoin proteins to contract the cell (Fukui, 2002). The filaments disassociate into unlinked filaments, and then are re-linked (a linked fiber is a fiber that is connected to another fiber via a linking protein (Cooper, Hausman, 2004). A collection of cross-linked fibers is also known as a "gel") in a pseudopod to give the protrusion structural stability. As a pseudopod increases in size, the cell can displace more and more of its contents into the pseudopod until what was once a pseudopod is now so large that it is considered part of the cell body, and the cell has displaced itself into a new position, and has therefore moved. This is the process of amoeboid movement; a form of movement which acts via displacement and cellular reformation. An amoeba is a single-celled organism protozoic organism that lives in freshwater environments such as ponds, rivers, or any other freshwater ecosystem. It is known that actin filaments play a significant role in the motility of cells through their de-linking and re-geling at the movement front (Cooper, Hausman, 2004). -
Dual Targeting of Mesenchymal and Amoeboid Motility Hinders Metastatic Behavior Brandon C
Published OnlineFirst February 24, 2017; DOI: 10.1158/1541-7786.MCR-16-0411 Cell Death and Survival Molecular Cancer Research Dual Targeting of Mesenchymal and Amoeboid Motility Hinders Metastatic Behavior Brandon C. Jones1, Laura C. Kelley2, Yuriy V. Loskutov2, Kristina M. Marinak2, Varvara K. Kozyreva2, Matthew B. Smolkin3, and Elena N. Pugacheva1,2 Abstract Commonly upregulated in human cancers, the scaffolding tional amoeboid motility, indicating a role of NEDD9 in the protein NEDD9/HEF1 is a known regulator of mesenchymal regulation of downstream RhoA signaling effectors. Simulta- migration and cancer cell plasticity. However, the functional neous depletion of NEDD9 or inhibition of AURKA in com- role of NEDD9 as a regulator of different migration/invasion bination with inhibition of the amoeboid driver ROCK results modes in the context of breast cancer metastasis is currently in an additional decrease in cancer cell migration/invasion. unknown. Here, it is reported that NEDD9 is necessary for both Finally, we confirmed that a dual targeting strategy is a viable mesenchymal and amoeboid individual cell migration/inva- and efficient therapeutic approach to hinder the metastasis of sion in triple-negative breast cancer (TNBC). NEDD9 deficiency breast cancer in xenograft models, showcasing the important results in acquisition of the amoeboid morphology, but severe- need for further clinical evaluation of this regimen to impede ly limits all types of cell motility. Mechanistically, NEDD9 the spread of disease and improve patient survival. promotes mesenchymal migration via VAV2-dependent Rac1 activation, and depletion of VAV2 impairs the ability of Implications: This study provides new insight into the thera- NEDD9 to activate Rac1. -
Calpain-2 Regulates Hypoxia/HIF-Induced Amoeboid Reprogramming and Metastasis
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.06.892497; this version posted January 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Calpain-2 regulates hypoxia/HIF-induced amoeboid reprogramming and metastasis Veronika te Boekhorst1,2, Liying Jiang1, Marius Mählen2, Maaike Meerlo3, Gina Dunkel2, Franziska C. Durst1*, Yanjun Yang4, Herbert Levine4,5, Boudewijn M. T. Burgering3,6, Peter Friedl1, 2, 6 1David H. Koch Center for Applied Research of Genitourinary Cancers, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA 2Dept. of Cell Biology, Radboud University Medical Centre, 6525GA Nijmegen, The Netherlands 3Dept. of Molecular Cancer Research Center of Molecular Medicine, UMC Utrecht, the Netherlands and Oncode Institute 4Dept. of Physics, Northeastern Univ. Boston MA 02115 5Center for Theoretical Biological Physics, Rice University Houston, TX 77005 6Cancer Genomics Center, 3584 CG Utrecht, The Netherlands * Current Address: Regensburg Center of Interventional Immunology (RCI), 93053 Regensburg Corresponding author: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.06.892497; this version posted January 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Summary Hypoxia, through hypoxia inducible factor (HIF), drives cancer cell invasion and metastatic progression in various cancer types, leading to poor prognosis. In epithelial cancer, hypoxia further induces the transition to amoeboid cancer cell dissemination, yet the molecular mechanisms, relevance for metastasis, and effective interventions to combat hypoxia-induced amoeboid reprogramming remain unclear. -
Regulation of Movement Speed by Intracellular Ph During Dictyostelium Discoideum Chemotaxis (Amoeboid Movement/Random Movement/Camp/Signal Transduction/Ph Change) B
Proc. Nati. Acad. Sci. USA Vol. 88, pp. 4951-4955, June 1991 Cell Biology Regulation of movement speed by intracellular pH during Dictyostelium discoideum chemotaxis (amoeboid movement/random movement/cAMP/signal transduction/pH change) B. VAN DUUN*t§ AND K. INOUYE* *Department of Botany, Faculty of Science, Kyoto University, Kyoto 606, Japan; tDepartment of Physiology and Physiological Physics, Leiden University, P.O. Box 9604, NL-2300 RC Leiden, The Netherlands; and tCell Biology and Genetics Unit, Zoological Laboratories, Leiden University, Kaiserstraat 63, NL-2311 GP Leiden, The Netherlands Communicated by J. T. Bonner, February 22, 1991 ABSTRACT Evidence is presented that the chemoattrac- aerogenes or Escherichia coli 281 on modified SM medium tant-induced cytoplasmic alklinization in the cellular slime (4.4 g of KH2PO4, 2.0 g of Na2HPO4, 1.0 g of MgSO4-7 H20, mold Dictyostelium discoideum is essential in regulating loco- 7.5 g of glucose, 10.0 g of Bacto-peptone (Difco), 1.0 g of motion speed during chemotaxis. Intracellular pH was manip- yeast extract (Difco), 15 g of agar, 1 liter of H20) at 220C. ulated with weak bases, weak acids, and proton-pump inhibi- Vegetative cells were harvested with cold 20 mM sodium/ tion. Speed of locomotion of individual cells was measured potassium phosphate buffer, pH 6.0 (PB), and washed free of during random and chemotactic movement. We found that (i) bacteria by repeated washes and centrifugation. Starved cells an increase of cytoplasmic pH increases the speed of randomly were obtained by incubating cells on nonnutrient agar (1.5% moving cells and (ii) the chemoattractant-induced rise in agar in H20) at a density of 1.5 x 106 cells per cm2 for -4 hr intracellular pH is essential for the increase in directed loco- at 22°C, after which cells were shaken in suspension in PB for motion speed upon chemotactic stimulation. -
Mechanical Modes of 'Amoeboid' Cell Migration
Available online at www.sciencedirect.com Mechanical modes of ‘amoeboid’ cell migration Tim La¨ mmermann and Michael Sixt The morphological term ‘amoeboid’ migration subsumes a In this review, we distinguish different modes of amoe- number of rather distinct biophysical modes of cellular boid migration by dissecting components of force locomotion that range from blebbing motility to entirely actin- generation (protrusion and contraction) and force trans- polymerization-based gliding. Here, we discuss the diverse duction (adhesiveness). We conclude that shifting the principles of force generation and force transduction that lead balance between these components creates distinct to the distinct amoeboid phenotypes. We argue that shifting the modes of amoeboid movement. We will primarily focus balance between actin protrusion, actomyosin contraction, and on the crawling of leukocytes in two-dimensional (2D) adhesion to the extracellular substrate can explain the different and three-dimensional (3D) environments and compare modes of amoeboid movement and that blebbing and gliding it with the migration of other amoeboid cells. Impor- are barely extreme variants of one common migration strategy. tantly, the discussed modes of migration are restricted Depending on the cell type, physiological conditions or to cells moving in porous environments that do not experimental manipulation, amoeboid cells can adopt the require proteolytic degradation or opening of junctions distinct mechanical modes of amoeboid migration. in order to be traversed [3]. Accordingly, invasion and penetration of extracellular or cellular barriers like Address basement membranes and epithelial or endothelial Max Planck Institute of Biochemistry, Hofschneider Group Leukocyte linings follow other principles that are discussed else- Migration, 82152 Martinsried, Germany where [4,5]. -
A NEW THEORY of PROTOPLASMIC STREAMING by Odis Hayden
t^' A NEW THEORY OF PROTOPLASMIC STREAMING by Odis Hayden Griffin, Jr., B.S. in M.E. A THESIS IN MECHANICAL ENGINEERING Submitted to the Graduate Faculty of Texas Tech University in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE IN MECHANICAL ENGINEERING Approved Accepted May, 1971 T5 197/ AJo^ 19 ACKNOWLEDGEMENTS I am truly grateful to Dr. G. S. Kirby for the many hours he spent in the direction of my research and in the preparation of this thesis. I am also grateful to Dr. J. D. Berlin for his consultation and shared knowledge and to Dr. V. W. Proctor, who supplied laboratory cultures of Chara which were used for observation. I also would like to thank Dr. G- W. Goldman for his invaluable assistance in the preparation of the manuscript. 11 TABLE OF CONTENTS ACKNOWLEDGEMENTS ii LIST OF TABLES iv LIST OF FIGURES v NOMENCLATURE vi I. INTRODUCTION 1 Prevalent Forms of Protoplasmic Movement 2 Streaming Movements of Protoplasm 2 Amoeboid Movement 6 II. A REVIEW OF THE LITERATURE 8 Protoplasm 8 Rotational Streaming 13 Amoeboid Movement 31 Conclusions 44 III. DEVELOPMENT OF THE MOMENTUM TRANSPORT MODEL FOR PROTOPLASMIC STREAMING 48 Nonequilibrium Thermodynamics 4 8 The Momentum Transport Model for Protoplasmic Streaming 53 Summary 58 IV. CONCLUSIONS 63 LIST OF REFERENCES 64 111 f^- LIST OF TABLES Table 1. Comparison of Five Theories of Protoplasmic Movement 60 IV LIST OF FIGURES Figure 1. Schematic of Nitella Rhizoid 3 2. Elodea Leaf Cell 5 3. Schematic of Amoeba 6 4. Velocity Profile for Nitella Leaf Cell 22 5.