Paradigm Shift in Determining Neoproterozoic Atmospheric Oxygen
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Oxygen Evolution
1 BISC 367 Plant Physiology Laboratory Simon Fraser University Chloroplast photosynthesis Effects of varying light intensities and wavelengths on the activity of the oxygen evolving complex Photosynthesis can be divided into two major pathways, the “light reactions and the carbon reduction reactions”. The light reactions consisting of the light regulated splitting of water and subsequent transport of electrons takes place in the grana of the chloroplast. The rate of this reaction can be monitored by several methods. For example, the rate of NADPH production (the end product of the electron transport chain) can be monitored with a dye such as Neotetrasolium chloride. Another frequently used method to detect chloroplast activity is to monitor the rate of oxygen evolution. Although the final electron acceptor in vivo is NADP, in isolated chloroplasts, the activity of this compound is quite low. Therefore artificial electron acceptors such as potassium ferricyanide or methyl violagen are used to sustain the transport of electrons, received from the splitting of water at photosystem II, across the electron transport chain. In this exercise we will be using isolated spinach chloroplasts to study the effects of quantity (different light intensities) and quality (different wave lengths) of light on the rate of oxygen evolution. Also, the effectiveness of two photosystem inhibitors on O2 production will be compared. The mode of action of these inhibitors is different. DCMU (3-3,4 dichlorophenyl-1.1 dimethyl urea) is an herbicide that accepts electrons from one of the intermediates in the electron transport chain (ETC). FMN (flavin mononucleotide) on the other hand inhibits oxygen production by accepting electrons and transferring them to O2 (Mehler reaction). -
Enhancing the Effectiveness of Oxygen Evolution Reaction by Electrodeposition of Transition Metal Nanoparticles on Nickel Foam Material
catalysts Article Enhancing the Effectiveness of Oxygen Evolution Reaction by Electrodeposition of Transition Metal Nanoparticles on Nickel Foam Material Mateusz Łuba 1 , Tomasz Mikołajczyk 1,* , Mateusz Kuczy ´nski 1, Bogusław Pierozy˙ ´nski 1,* and Ireneusz M. Kowalski 2 1 Department of Chemistry, Faculty of Agriculture and Forestry, University of Warmia and Mazury in Olsztyn, Plac Lodzki 4, 10-727 Olsztyn, Poland; [email protected] (M.Ł.); [email protected] (M.K.) 2 Department of Rehabilitation, Faculty of Medical Sciences, University of Warmia and Mazury in Olsztyn, Zolnierska 14C Street, 10-561 Olsztyn, Poland; [email protected] * Correspondence: [email protected] (T.M.); [email protected] (B.P.); Tel.: +48-89-523-4177 (B.P.) Abstract: Electrochemical oxygen evolution reaction (OER) activity was studied on nickel foam-based electrodes. The OER was investigated in 0.1 M NaOH solution at room temperature on as-received and Co- or Mo-modified Ni foam anodes. Corresponding values of charge-transfer resistance, exchange current-density for the OER and other electrochemical parameters for the examined Ni foam composites were recorded. The electrodeposition of Co or Mo on Ni foam base-materials resulted in a significant enhancement of the OER electrocatalytic activity. The quality and extent Citation: Łuba, M.; Mikołajczyk, T.; of Co, and Mo electrodeposition on Ni foam were characterized by means of scanning electron Kuczy´nski,M.; Pierozy´nski,B.;˙ microscopy (SEM) and energy-dispersive X-ray spectroscopy (EDX) analysis. Kowalski, I.M. Enhancing the Effectiveness of Oxygen Evolution Keywords: oxygen evolution reaction; Ni foam; Co-modified Ni foam; Mo-modified Ni foam; Reaction by Electrodeposition of electrodeposition; electrochemical impedance spectroscopy Transition Metal Nanoparticles on Nickel Foam Material. -
A Critique of Phanerozoic Climatic Models Involving Changes in The
Earth-Science Reviews 56Ž. 2001 1–159 www.elsevier.comrlocaterearscirev A critique of Phanerozoic climatic models involving changes in the CO2 content of the atmosphere A.J. Boucot a,), Jane Gray b,1 a Department of Zoology, Oregon State UniÕersity, CorÕallis, OR 97331, USA b Department of Biology, UniÕersity of Oregon, Eugene, OR 97403, USA Received 28 April 1998; accepted 19 April 2001 Abstract Critical consideration of varied Phanerozoic climatic models, and comparison of them against Phanerozoic global climatic gradients revealed by a compilation of Cambrian through Miocene climatically sensitive sedimentsŽ evaporites, coals, tillites, lateritic soils, bauxites, calcretes, etc.. suggests that the previously postulated climatic models do not satisfactorily account for the geological information. Nor do many climatic conclusions based on botanical data stand up very well when examined critically. Although this account does not deal directly with global biogeographic information, another powerful source of climatic information, we have tried to incorporate such data into our thinking wherever possible, particularly in the earlier Paleozoic. In view of the excellent correlation between CO2 present in Antarctic ice cores, going back some hundreds of thousands of years, and global climatic gradient, one wonders whether or not the commonly postulated Phanerozoic connection between atmospheric CO2 and global climatic gradient is more coincidence than cause and effect. Many models have been proposed that attempt to determine atmospheric composition and global temperature through geological time, particularly for the Phanerozoic or significant portions of it. Many models assume a positive correlation between atmospheric CO2 and surface temperature, thus viewing changes in atmospheric CO2 as playing the critical role in r regulating climate temperature, but none agree on the levels of atmospheric CO2 through time. -
Large Sulfur-Isotope Anomaly in Nonvolcanic Sulfate Aerosol and Its Implications for the Archean Atmosphere
Large sulfur-isotope anomaly in nonvolcanic sulfate aerosol and its implications for the Archean atmosphere Robina Shaheena, Mariana M. Abaunzaa, Teresa L. Jacksona, Justin McCabea,b, Joël Savarinoc,d, and Mark H. Thiemensa,1 aDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093; bPacific Ridge School, Carlsbad, CA 92009; cLaboratoire de Glaciologie et de Géophysique de l’Environnement, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 5183, F-38041 Grenoble, France; and dLaboratoire de Glaciologie et de Géophysique de l’Environnement, Université Grenoble Alpes, Unité Mixte de Recherche 5183, F-38041 Grenoble, France † Edited by Barbara J. Finlayson-Pitts, University of California, Irvine, CA, and approved July 18, 2014 (received for review April 8, 2014) Sulfur-isotopic anomalies have been used to trace the evolution of (1980–2002) have recently revealed how ENSO-driven changes oxygen in the Precambrian atmosphere and to document past affect the global transport and transformation of sulfate aero- volcanic eruptions. High-precision sulfur quadruple isotope sols from the troposphere to the stratosphere and across hemi- measurements of sulfate aerosols extracted from a snow pit at spheres (10). the South Pole (1984–2001) showed the highest S-isotopic anoma- lies (Δ33S =+1.66‰ and Δ36S =+2‰) in a nonvolcanic (1998–1999) Results and Discussion period, similar in magnitude to Pinatubo and Agung, the largest 2- The highest SO4 concentration in snow [154 parts per billion volcanic eruptions of the 20th century. The highest isotopic anom- (ppb)] is observed after volcanic activity (Pinatubo, June 1991; aly may be produced from a combination of different stratospheric Cerro Hudson, August 1991). -
Solar-Driven, Highly Sustained Splitting of Seawater Into Hydrogen and Oxygen Fuels
Solar-driven, highly sustained splitting of seawater into hydrogen and oxygen fuels Yun Kuanga,b,c,1, Michael J. Kenneya,1, Yongtao Menga,d,1, Wei-Hsuan Hunga,e, Yijin Liuf, Jianan Erick Huanga, Rohit Prasannag, Pengsong Lib,c, Yaping Lib,c, Lei Wangh,i, Meng-Chang Lind, Michael D. McGeheeg,j, Xiaoming Sunb,c,d,2, and Hongjie Daia,2 aDepartment of Chemistry, Stanford University, Stanford, CA 94305; bState Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing 100029, China; cBeijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing 100029, China; dCollege of Electrical Engineering and Automation, Shandong University of Science and Technology, Qingdao 266590, China; eDepartment of Materials Science and Engineering, Feng Chia University, Taichung 40724, Taiwan; fStanford Synchrotron Radiation Light Source, SLAC National Accelerator Laboratory, Menlo Park, CA 94025; gDepartment of Materials Science and Engineering, Stanford University, Stanford, CA 94305; hCenter for Electron Microscopy, Institute for New Energy Materials, Tianjin University of Technology, Tianjin 300384, China; iTianjin Key Laboratory of Advanced Functional Porous Materials, School of Materials, Tianjin University of Technology, Tianjin 300384, China; and jDepartment of Chemical Engineering, University of Colorado Boulder, Boulder, CO 80309 Contributed by Hongjie Dai, February 5, 2019 (sent for review January 14, 2019; reviewed by Xinliang Feng and Ali Javey) Electrolysis of water to generate hydrogen fuel is an attractive potential ∼490 mV higher than that of OER, which demands renewable energy storage technology. However, grid-scale fresh- highly active OER electrocatalysts capable of high-current (∼1 2 water electrolysis would put a heavy strain on vital water re- A/cm ) operations for high-rate H2/O2 production at over- sources. -
Earth: Atmospheric Evolution of a Habitable Planet
Earth: Atmospheric Evolution of a Habitable Planet Stephanie L. Olson1,2*, Edward W. Schwieterman1,2, Christopher T. Reinhard1,3, Timothy W. Lyons1,2 1NASA Astrobiology Institute Alternative Earth’s Team 2Department of Earth Sciences, University of California, Riverside 3School of Earth and Atmospheric Science, Georgia Institute of Technology *Correspondence: [email protected] Table of Contents 1. Introduction ............................................................................................................................ 2 2. Oxygen and biological innovation .................................................................................... 3 2.1. Oxygenic photosynthesis on the early Earth .......................................................... 4 2.2. The Great Oxidation Event ......................................................................................... 6 2.3. Oxygen during Earth’s middle chapter ..................................................................... 7 2.4. Neoproterozoic oxygen dynamics and the rise of animals .................................. 9 2.5. Continued oxygen evolution in the Phanerozoic.................................................. 11 3. Carbon dioxide, climate regulation, and enduring habitability ................................. 12 3.1. The faint young Sun paradox ................................................................................... 12 3.2. The silicate weathering thermostat ......................................................................... 12 3.3. Geological -
1 Supplementary Materials and Methods 1 S1 Expanded
1 Supplementary Materials and Methods 2 S1 Expanded Geologic and Paleogeographic Information 3 The carbonate nodules from Montañez et al., (2007) utilized in this study were collected from well-developed and 4 drained paleosols from: 1) the Eastern Shelf of the Midland Basin (N.C. Texas), 2) Paradox Basin (S.E. Utah), 3) Pedregosa 5 Basin (S.C. New Mexico), 4) Anadarko Basin (S.C. Oklahoma), and 5) the Grand Canyon Embayment (N.C. Arizona) (Fig. 6 1a; Richey et al., (2020)). The plant cuticle fossils come from localities in: 1) N.C. Texas (Lower Pease River [LPR], Lake 7 Kemp Dam [LKD], Parkey’s Oil Patch [POP], and Mitchell Creek [MC]; all representing localities that also provided 8 carbonate nodules or plant organic matter [POM] for Montañez et al., (2007), 2) N.C. New Mexico (Kinney Brick Quarry 9 [KB]), 3) S.E. Kansas (Hamilton Quarry [HQ]), 4) S.E. Illinois (Lake Sara Limestone [LSL]), and 5) S.W. Indiana (sub- 10 Minshall [SM]) (Fig. 1a, S2–4; Richey et al., (2020)). These localities span a wide portion of the western equatorial portion 11 of Euramerica during the latest Pennsylvanian through middle Permian (Fig. 1b). 12 13 S2 Biostratigraphic Correlations and Age Model 14 N.C. Texas stratigraphy and the position of pedogenic carbonate samples from Montañez et al., (2007) and cuticle were 15 inferred from N.C. Texas conodont biostratigraphy and its relation to Permian global conodont biostratigraphy (Tabor and 16 Montañez, 2004; Wardlaw, 2005; Henderson, 2018). The specific correlations used are (C. Henderson, personal 17 communication, August 2019): (1) The Stockwether Limestone Member of the Pueblo Formation contains Idiognathodus 18 isolatus, indicating that the Carboniferous-Permian boundary (298.9 Ma) and base of the Asselian resides in the Stockwether 19 Limestone (Wardlaw, 2005). -
The Rise of Atmospheric Oxygen Lee R
NATURE|Vol 451|17 January 2008|doi:10.1038/nature06587 YEAR OF PLANET EARTH FEATURE The rise of atmospheric oxygen Lee R. Kump Clues from ancient rocks are helping to produce a coherent picture of how Earth’s atmosphere changed from one that was almost devoid of oxygen to one that is one-fifth oxygen. Imagine a Star Trek episode in which the Starship Enterprise stumbles proportions7 with ice extending to the tropics. In the scenario proposed into a time warp and is transported to Earth 3 billion years ago. The by Zahnle et al.6, the decrease in methane would account for the increase crew are eager to disembark but, before they do, they need to discover in atmospheric oxygen, an alternative to the previously proposed scenario more about the pink methane haze1 that surrounds the planet. The Star- in which the rise in oxygen is proposed to have caused the collapse of the ship Enterprise analyses a sample and, to the crew’s surprise, it finds that methane ‘greenhouse’8. Given the high reactivity of methane and oxygen, Earth’s atmosphere is as inhospitable as those of most of the celestial bod- the rise of oxygen and the demise of methane must have been inextricably ies they have encountered. Although the crew’s hopes of exploring the linked; unravelling cause and effect will continue to be a challenge. surface of the early Earth are dashed, they did manage something that On closer inspection9,10, the Archaean (pre-2.5 billion years ago) MIF no one has done before. -
Dynamical Paleoclimatology of Mars
Dynamical Paleoclimatology of Mars Thesis by Alejandro Soto In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy California Institute of Technology Pasadena, California 2012 (Defended November 30th, 2011) ii © 2012 Alejandro Soto All Rights Reserved iii To those without whom I would never have been able to do this work, but who will never see it. iv Acknowledgements Back when I was an engineer at the Jet Propulsion Laboratory, I learned first hand that Caltech professors were generous and supportive, especially about science. I was a 20- something JPL engineer, which means that, like all 20-something JPL engineers, I was enthusiastic and fearless, completely confident that despite the hurdles we were going to get the bird off the ground and to whatever exotic planet the spacecraft was destined. And if I did not actually know what I was doing, which we all secretly feared, well, that was just another engineering challenge to be solved like all others. With this passion, with this hubris, I naively demanded the various scientists with whom I worked to teach me the science for which we designed and built instruments and space- craft. While I was working on designing within strict mass and constraints a Michelson interferometer destined for Mars, I insisted that members of the science team explain not just the needed resolution or sampling rate or whatever, but also explain what atmospheric chemicals were measured, with what did they react, and how this told us something interest- ing about the universe. And Professor Paul Wennberg did. And Professor Mark Richardson chimed in with more. -
Oxygen Evolution in Photosynthesis: Simple Analytical Solution for the Kok Model
Biophysical Journal Volume 85 July 2003 435–441 435 Oxygen Evolution in Photosynthesis: Simple Analytical Solution for the Kok Model Vladimir P. Shinkarev Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois ABSTRACT The light-induced oxidation of water by Photosystem II (PS II) of higher plants, algae, and cyanobacteria, is the main source of atmospheric oxygen. The discovery of the flash-induced period four oscillations in the oxygen evolution made by Pierre Joliot in 1969 has a lasting impact on current photosynthesis research. Bessel Kok explained such oscillations by introducing the cycle of flash-induced transitions of states (S-states) of an oxygen-evolving complex governed by the values of miss and double hit. Although this Kok model has been successfully used over 30 years for interpretation of experimental data in photosynthesis, until now there has been no simple analytical solution for it. Such an analytical solution for individual S-states and for oxygen evolution is presented here. When only the S1 state is present before flash series, and when both the miss and double hit are zero, the oxygen evolved by the PSII after the nth flash, Y(n), is given by the following equation: 4Y(n) ¼ 1 1 (ÿ1)nÿ1 ÿ 2 cos((n ÿ 1)p/2). It is found here that binary oscillations of the secondary acceptor semiquinone at the acceptor side of the reaction center of PS II and release of reducing equivalents from reaction center to b6f complex can also be determined in the framework of the Kok model. The simple solutions found here for individual S-states, semiquinone, and oxygen evolution provide a basis for quantitative description of the charge accumulation processes at the donor and acceptor sides of PSII. -
Perovskite Oxides As Bifunctional Oxygen Electrocatalysts for Oxygen
Applied Materials Today 16 (2019) 56–71 Contents lists available at ScienceDirect Applied Materials Today j ournal homepage: www.elsevier.com/locate/apmt Review Perovskite oxides as bifunctional oxygen electrocatalysts for oxygen evolution/reduction reactions – A mini review a a b a,∗ Haizhen Wang , Meng Zhou , Pabitra Choudhury , Hongmei Luo a Department of Chemical and Materials Engineering, New Mexico State University, Las Cruces, NM 88003, United States b Chemical and Materials Engineering Departments, New Mexico Tech, NM 87801, United States a r a t b i c s t l e i n f o r a c t Article history: Energy crisis due to the depletion of fossil fuel as well as the increased population has stimulated Received 11 March 2019 researchers to search for new energy resources and energy storage and conversion systems, including Received in revised form 28 April 2019 fuel cells, electrolyzers and metal–air batteries. Oxygen evolution reaction (OER) and oxygen reduction Accepted 4 May 2019 reaction (ORR) are two reactions that dominate the overall performance of these devices. However, the sluggish kinetics of these two reactions still impedes the practical application of these devices. There- Keywords: fore, electrocatalysts, especially non-noble metal oxides are needed to expedite the reactions. Perovskite Oxygen evolution/reduction reaction oxides, as a member of the mixed metal oxide family, show promising electrocatalytic performance Perovskite oxides toward both ORR and OER. However, there are only a few articles regarding the recent progress of per- Bifunctional electrocatalysts ovskites as bifunctional electrocatalysts till now. In this mini-review, we summarize the recent research status and progress of perovskite oxides as electrocatalysts for ORR/OER, including the basic mecha- nism behind the catalytic reactions, different approaches to synthesize perovskites as well as the various strategies that researchers have developed to promote their electrocatalytic activities. -
The Early Origins of Terrestrial C4 Photosynthesis
ANRV309-EA35-15 ARI 20 March 2007 15:58 The Early Origins of Terrestrial C4 Photosynthesis Brett J. Tipple and Mark Pagani Department of Geology and Geophysics, Yale University, New Haven, Connecticut 06520; email: [email protected], [email protected] Annu. Rev. Earth Planet. Sci. 2007. 35:435–61 Key Words First published online as a Review in Advance on paleoclimate, carbon isotopes, bioapatite, paleosols, February 21, 2007 compound-specific isotope analysis The Annual Review of Earth and Planetary Sciences is online at earth.annualreviews.org Abstract This article’s doi: The C4 photosynthetic pathway is a series of structural and bio- 10.1146/annurev.earth.35.031306.140150 chemical modifications around the more primitive C3 pathway that Copyright c 2007 by Annual Reviews. improve the photosynthetic efficiency under specific climatic condi- All rights reserved tions. Hence, the origin and subsequent geographical expansion of 0084-6597/07/0530-0435$20.00 the C4 plants likely reflects a record of climate change. Multiple pa- leoatmospheric pCO2 proxies indicate a critical CO2 threshold was breached ∼30 Ma, that potentially selected for CO2-concentrating mechanisms to overcome photorespiratory stresses imposed on the basic C3 pathway. Details of the C4 pathway’s earliest origins re- main enigmatic given the paucity of the geologic record. Nonethe- less, δ13C proxy records from paleosol carbonates, ungulate teeth, and plant-derived compounds indicate C4 plants likely represented an important component of plant biomass by the Early Miocene. Low CO2 levels appear to be a precondition for the development by Yale University STERLING CHEMISTRY LIBRARY on 11/10/09.